Peromyscus leucopus (white-footed mouse): 114693599
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Entry
114693599 CDS
T07241
Symbol
Smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pleu03036
]
114693599 (Smarcal1)
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114693599 (Smarcal1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
114693599
NCBI-ProteinID:
XP_028725855
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All DBs
Position
13:complement(39975847..40021627)
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AA seq
931 aa
AA seq
DB search
MSLPLTEEQKKKIEENRQKALARRAEKLSEQPQSTASGPAVSGPSQPQQGPFLNLPAGPS
KPVGHGVLFKQQNLNNSFPSDQRPHSSNHVQPSTPEPAKGICKIQEGRSTACSSPAPSLP
NICNQQLLGYKSDQGHPQASHQIKSTPIATTPQEPLAKAQSAQDTAAFSGPFPRDLELEA
KTVKPSTSGQGGSDTFYALGGKTPRTEGRPPKKLQTSSQKTSCLQGTCVRMGDRFQVKIG
YKEELIAVFKSLPSRRYDPVTKTWDFSMSDYSALMKAAERLSTVSLQPLEEVDGSVRGQS
SLPSAPSLAFVTGRCVLISRARFEVDIGYSEELIALFKQMDSRNYDAKTRKWSFLLEEHN
KLITKSRDLKQVRLDPLPKTVTLAFASQLEKTSLNAQADVPEADLSGVDAKLVDNLMPFQ
REGVSFAISKRGRLLLADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRW
LPSLSPENINVVVTGKGRLTAGLVNIVSFDLLSKLERQLKTPFKVVIIDESHFLKNIKTA
RCRAAVPILKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRLPW
GWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKMVVVNPGRISTRAKAALDAA
AKGMMEIKTKQQQKEALIVFFNRTAEAKIPCVIEYILDLLESGREKFLVFAHHKVVLDAV
VKELERKQVQNIRIDGSTSSADREDLCQRFQLSKGHAVAVLSITAANMGLTFSSADLVVF
AELFWNPGVLIQAEDRVHRIGQTNSVGIHYLVAKGTADDYLWPLIQEKIKVLGEAGLSET
NFSEMTEATDYLYKDPKQKTIYDVFQQSFEEDGNDMELLAAAESFDPGSTSGTSGSSSQD
LGDFLDENSLTDSPPKKKRFEFFDNWDSFTF
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgccactcacagaggagcagaagaaaaagatcgaagagaatcgacaaaaggct
ctggcccgtcgagctgagaagttatcagaacagcctcagagcacagcttccggccccgct
gtttctggcccttcccaaccccagcagggtcctttcttgaatcttccagcggggccttct
aagccagtgggccatggtgtccttttcaagcaacagaatctcaacaattcatttccttct
gatcagagacctcacagttccaaccatgttcagcccagcacaccagagccggcaaagggg
atatgcaagatccaagaagggaggtccacagcttgctcaagccctgccccaagtcttcca
aacatctgtaaccagcagcttttgggttataagtcagatcagggtcatccccaggcttct
catcagatcaagtcgacgcccattgctaccacaccccaggagcccttggctaaagcacag
agtgcccaggacacagcggccttctctggaccatttcccagagatcttgagttagaggcc
aagacagtgaagccctccacctctgggcagggcggttcggacaccttttatgccttaggg
ggaaaaacacctagaacagaaggcagacccccaaagaaactgcaaacctcatcccaaaaa
acaagctgtctgcagggaacgtgcgtaaggatgggagatcgtttccaggtgaagattggc
tacaaagaagagctcattgccgtgtttaagtccctgcccagcagacgctatgatcctgtt
acaaagacgtgggacttcagcatgagcgactacagcgccttgatgaaggcagccgagcga
ctctccacggtctccctccagcctctggaagaggttgatggcagtgtcaggggacagagc
agccttccctcagctccgtcccttgcctttgtcacagggaggtgcgtgctcatctcccgg
gcgcgcttcgaggttgacattggctattcggaggagctgatcgcactgtttaaacagatg
gattccaggaattacgatgccaagaccaggaagtggagctttctcctggaggagcacaat
aaactgattacaaagtcacgtgatctcaagcaagttcggctggaccctctgcccaagaca
gtgaccctggcatttgcatctcagctggagaagacatctctcaatgcccaagcagacgtg
cctgaagctgacctttctggagtggatgccaagcttgtggataacctcatgcccttccag
agagagggagttagctttgccatatcaaaaagaggccgcctgctgcttgctgatgacatg
ggcctggggaagaccatccaagccatctgtatagccgccttttaccggaaggaatggccg
ctcctggtggtcgtgccctcctctgtgcgcttcacctgggagcaggcctttcttcggtgg
ctgccgtctctgagcccagagaacatcaacgtggtggtgaccgggaagggccgcctaaca
gctggcttggtcaacattgttagttttgatcttcttagcaagttggaaaggcagctaaaa
acccccttcaaagtcgtcattatcgatgaatcacacttcctcaaaaacattaagactgcc
cgctgccgagcagctgtgcccatcctaaaggttgccaagagagtgatcctcctgtcgggc
acgccagccatgtcccggcctgcagagctctacacacagatcattgccgtcaagccgaca
ttcttccctcagtttcatgcctttggacttcgctactgtgatgccaagcggctcccttgg
ggctgggactactcgggctcctccaacctgggcgagctgaagctgctgctggaggaggca
gtcatgctgaggcggctcaagtctgacgtcctttcccagcttccagccaagcagcgcaag
atggtggtggtcaaccctggtcggatcagcaccagggccaaggcggccctggatgcagcg
gccaaaggaatgatggagatcaaaacgaaacaacagcagaaagaagcgctcatcgtcttc
ttcaacagaacagcagaagctaaaatcccctgtgtcattgaatatatcctggaccttttg
gagagtggacgagagaagtttctagtgtttgcacaccataaggtggtcctggatgcagtt
gttaaggagctcgagaggaagcaggttcagaacatccgaatcgacggctccacttcttca
gcagaccgcgaggatctgtgccagcggttccagctgtccaaagggcacgccgtggcagtg
ctgtccatcaccgccgccaacatgggcctcaccttctcctcggctgacctggtggtgttt
gctgagctgttttggaaccccggggtgctgatccaggccgaggaccgcgtgcaccgcatc
gggcagacaaactctgtgggcattcactatctggtggcaaaaggcacagcggatgactac
ctttggcctctgattcaagagaagattaaagttctgggggaagccgggctttccgagacc
aatttctcagaaatgacagaagccactgattacctctacaaggacccgaagcagaagacg
atctatgacgtgttccagcagtcctttgaagaagacggaaatgacatggaacttctggcg
gcagctgagtcctttgacccaggaagtacttcaggaacctctggaagtagttcccaggat
ctgggagacttcttggatgaaaactccttgacagacagtccaccaaagaaaaagagattt
gaattttttgataattgggatagctttaccttttaa
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