Peromyscus leucopus (white-footed mouse): 114693607
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Entry
114693607 CDS
T07241
Symbol
Bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114693607 (Bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114693607 (Bard1)
04121 Ubiquitin system [BR:
pleu04121
]
114693607 (Bard1)
03036 Chromosome and associated proteins [BR:
pleu03036
]
114693607 (Bard1)
03400 DNA repair and recombination proteins [BR:
pleu03400
]
114693607 (Bard1)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
114693607 (Bard1)
Ubiquitin system [BR:
pleu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
114693607 (Bard1)
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
114693607 (Bard1)
DNA repair and recombination proteins [BR:
pleu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
114693607 (Bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank_4
Ank
Ank_2
Ank_3
Ank_5
BRCT_2
BRCT
Ank_KRIT1
zf-C3HC4
zf-RING_5
ANK_LRRK2
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
114693607
NCBI-ProteinID:
XP_028725865
LinkDB
All DBs
Position
13:41518515..41590614
Genome browser
AA seq
761 aa
AA seq
DB search
MLRRPPTVRSGNKPSPAPAMEPAVAGPWAHSRAALARLESLLRCSRCTNILKEPVCLGGC
EHIFCSVCISDCVGSGCPVCCTPAWILDLKINRQLDSMIQLYSKLQNLLHANKLSDPKDT
TPKASLCGDAEMKKNSIKMWFSPRSKRVRYVVNKVSVQTQPPKAKGDKAQKASMYEFVST
SPPEVVSKRAKTASRTSAKKQPKKASAEINQEGSLRPETEDRFDSKEELKEERVVCCSPT
PVTESPRVNGEIDLLASGSVAESEYSGSLTEVSLPLAEHIVSPDTVSKNEETPEKKVCVK
DLRSVGRNGNHKGCSRPPNPTSENCGSDVLSPSRDGIKPAALAENPPLVDCSSGQVDVTL
RRNSNVSDDFLSLSPGTPPPLLNNSTHRQMMSSPATVKLSPGVTALKRNHRGETLLHIAS
IKGDIRSVEYLLQNGNDPNVKDHAGWTPLHEACSHGHLKIVELLLQHNALVNTTGYQNDS
PLHDAAKNGHVDIVKMLLSYGASRNAVNIFGVRPVDYTDNENIRSLLLLPEKNESFSTSQ
CSVVTAGQRRNGPLVLIGSGLSSQQQKMLSKLEALLKAKKCAEFDNTVTHVIVPDGEAQS
TLKCMLGILNGCWLLKFDWVKACLHSKVREQEEKYEVPGGPQRSRLNREQLLPKLFDGCY
FFLAGNFKHHPKDDLLKLIAAAGGKMLSRKPKPDSDVTQTINTVAYHAKPDSDQRFCTQY
IVYEDLFNCRPERVRQGKVWMAPSTWLISCVMAFELLPLDS
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcaggccgccgacggtccgctccgggaacaagccttctcccgctcccgccatg
gagccggctgtcgccgggccctgggcccacagccgcgcggcgctcgcccgcctggagagc
ctgctgcgctgctcccgctgcactaatattctgaaggagcccgtgtgcttaggaggatgt
gagcacatcttctgtagtgtttgtataagcgactgtgttggatcaggatgtccagtgtgt
tgtaccccagcctggatcctagacctcaagataaacagacagttggacagcatgatccag
ctttatagtaagcttcagaatttgctacatgccaataaactttcagatccaaaagacacc
acacccaaggcaagtttatgtggtgacgcagaaatgaagaagaattccataaaaatgtgg
tttagtcctcgcagtaagagagttagatatgttgtgaataaagtgtcagtgcagacccag
cctccaaaggcaaagggtgacaaagcccagaaagcctcaatgtatgaatttgtttccaca
agtccccctgaagttgtttctaagagggctaaaacagcttctcgaacatctgcgaaaaag
cagccgaagaaagcttcagctgagatcaaccaggaggggagtttaaggccagagacagaa
gatagatttgattccaaagaggaactgaaggaggaaagggttgtctgctgtagcccaaca
ccagttacggaaagtccacgggtgaatggtgaaatcgacttattagcaagtggctctgtt
gcagaatctgaatattctggaagcttgactgaagtgtctttaccattggctgagcatata
gtgtctccagacactgtgagcaagaatgaagagactcctgagaagaaggtctgtgtaaaa
gatcttcgctcagtagggcgtaatgggaatcacaaaggctgcagcaggcctcccaatccc
acttctgagaattgtgggagcgatgttttgagccccagcagagatggcattaagccagct
gcgcttgcagaaaacccaccgctggttgactgttcttcagggcaagttgatgtcacactc
aggagaaacagtaacgtgtcggatgacttcctcagcctctcaccaggcacacccccacct
ctgctgaataattcaactcacagacaaatgatgtcaagccccgccacagtgaagctgtca
cccggtgtcacggccttgaaaagaaatcacagaggagagactttgcttcatattgcttct
attaagggcgatatacgttccgttgaatacctcttacaaaatggaaacgacccaaatgtt
aaagaccatgctggatggacaccgttgcatgaagcctgcagtcatgggcacctgaagata
gtggaattgctcctccagcataatgctttggtcaacaccacaggctatcagaatgactcg
ccactccacgatgcggccaagaatgggcacgtggacatagtcaagatgttactgtcctat
ggcgcctccaggaatgctgttaacatatttggtgtacggcctgtggattatacagacaat
gaaaatataagatcattattgctgctaccagagaagaatgaatcattctcaactagccag
tgctcagtcgtgactgctggacagcgaaggaatgggccattggtgctcataggcagtggg
ctttcttcgcaacagcagaaaatgctcagcaaacttgaggcacttcttaaagctaaaaaa
tgtgctgagtttgacaatacagtaacccatgtcattgtgcccgatggtgaggctcaaagt
actctgaagtgcatgctggggattctcaatggatgctggctcctgaagtttgactgggtg
aaagcctgtctgcacagcaaagtacgtgaacaggaagaaaagtatgaagttcctggaggt
ccacagaggagcaggctcaacagagagcagctgttgccaaagctgtttgatggttgctac
ttctttttggcgggaaacttcaaacatcatccaaaggacgacctccttaagctcattgcc
gcagcaggaggcaagatgctcagtagaaagcccaagccagacagtgatgtgactcagacc
atcaacacagttgcgtaccatgccaaacctgattctgaccagcgcttctgtacccagtac
atcgtctatgaagatctgtttaattgtcgcccagaaagggttcggcagggcaaagtctgg
atggctccttccacctggcttatcagctgtgtaatggcctttgaattgctgccacttgac
agctga
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