Peromyscus leucopus (white-footed mouse): 114693636
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Entry
114693636 CDS
T07241
Symbol
Abca12
Name
(RefSeq) ATP-binding cassette sub-family A member 12
KO
K05646
ATP-binding cassette, subfamily A (ABC1), member 12
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
114693636 (Abca12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pleu02000
]
114693636 (Abca12)
Transporters [BR:
pleu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
114693636 (Abca12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_30
AAA_22
AAA_23
DUF4473
SRP54
Rad17
DUF4162
DUF1846
Motif
Other DBs
NCBI-GeneID:
114693636
NCBI-ProteinID:
XP_028725933
LinkDB
All DBs
Position
13:41223071..41388547
Genome browser
AA seq
2595 aa
AA seq
DB search
MASQFHQLRILVWKNWLGVKRQPLWTLVLILWPVIIFIILAITRTKFPPTAKPTCYLAPR
NLPSAGFFPFLQTLLCDTDSKCKDTPYGPRDLLRRKGIDAALFKDSEIPKKSSNPERDSN
LSLQSTQVPERSHTSLATLPPRPSSDSEGMGTDIFNGSQLLTHILDLEKLLKQNSTSEEI
RRELCTSYPGYTAEYAFSWLTLGKNVLNKFCLSNMTILESSLQELKYQVSQMSHDPDNQK
RVFQGLAQVLSFFSQVQQRREVWQLLSSFPDVFRNDTSLSALFGLLRKANRVLLVVQKVH
PRVQNDEGFSTLQKSVKHLLNTLDSPAQGDNSTHMWSGDDEQALSPSSLAAQLLILENFE
DAILNISSNSPYSPYLACIRNMTDDLARGSPDNLRLLQSTIRFRKSFLQNGSYEDDVPPF
PEVLKSKLSQLRNLTELLCESETFSWIETSCQLSEASFSRLCEDHAFHVQLIEAAELGAD
LITALLDHDNIISAKLRDLLTGDPSKINLNMDWLLEQALQMNYLENITQLIPTVEAMLHV
NTSVDASERPGQLIEMFKNVDELKEELRAMGMSNTSVDKLLAIPIPDNRAEIISRVFWLH
SCDANVTNPKLEDAMKEFCKLPLPERSHQSYLIGLTLLHYLDIYNFTYKVFFPRKDQKPV
ERMMELFIKLKRILNQLASGAHPLLDKMRSLKQMHLPKSVPLTQAMYRGTRMNTPAGSFS
TISQALCSQGITTEYLTSMLPSSQKPKGNHTKDFLTYKLTKEEIAAKYGIPLSATPFCFS
LYKDIINMPAGPVIWAFLKPMLLGKILYAPYNPTTKAIMEKSNVTLRQLAELREKSQEWM
DKSPIFMNSFHLLNQTIPMLQNTLRNPFVQVFVKFSVGLDAVELLKQIDDLDVLRLKLEN
NIDIIDQLNTLSSLTVNISSCVLYDRIQAADTVEEMELVAEKLYKSNELFGSVIFKLPSN
RGSHRGYGSENISLPPIVKYTIRMSLKTAQTTRSIRTKIWAPGPHNSPSHNQIYGRAFIY
LQDSIERAIIELQTGRNSQEVAVQVQAVPYPCFMKDNFLTSVSYSLPIVLMVAWVVFIAA
FVKKLVYEKDLRLHEYMKMMGVNSCSHFFAWLIESVGFLLVTIAILIVILKFGNILPKTN
GFILFLYFSDYSFSVIAMSYLISVFFNNTNIAALIGSLIYVIAFFPFIVLVTVEDELSYV
IKVFMSLLSPTAFSYASQYIARYEEQGVGLQWENMYKSPVQDDTTSFGWLCCLILADAFI
YFFIAWYVRNVFPGTYGMAAPWYFPVLPSYWKEQFGCAEVKREKSNGLMFTNIMMQNTNP
SASKISPDCAFPPNIEPEPKDLQVGVALHGVTKMYGTKTAVQNLNLNFYEGHITSLLGPN
GAGKTTTISMLTGLFSASAGTIFVYGKDIKTDLNTVRKNMGVCMQHDVLFSYLTTKEHLL
LYGSIKVPHWTKKQLHEEVKRTLKDTGLYSHRHKRVGTLSGGMKRKLSISIALIGGSRVV
ILDEPSTGVDPCSRRSIWDVISKNKTARTIILSTHHLDEAEVLSDRIAFLEQGGLRCCGS
PFYLKEAFGDGYHLTLTKKKSPNLDTNTLCDTGAVTAMIQSHLPEAYLKEDIGGELVYVL
PPFSTKVSGAYLSLLRALDKGMGKLNIGCYGISDTTVEEVFLNLTKDSQKSGNMSLEHLT
QRKVGSPSTNGTSTPDDLSVSSSNFTDRDDKVLTRSEKLDGFGLLLKKIMAILIKRFHHT
RRNWKGLIAQVVLPIVFVATAMGLGTLRDSSNSYPEILISPSIYGTSEQTAFYANFDPST
NALVSALWNFPGIDNVCLNTSNSQCFKKDSLGKWNTSGEAIDNFGVCSCSDNVQECPKFN
YSPPHRRIYSSQVIYNLTGNHMENYLISTANRFVQKRYGGWSFGLNLTNDLRFDITAVPV
NRTLAKVWYDPEGYHSLPAYLNSLNNFLLRVNMSEHDAARHGIMMYSHPYPGVQDQEQAT
ISSLIDILVALSILMGYSVTTASFVTYIVREHQTKAKQLQHISGIGVTCYWVTNFIYDMV
FYLVPVAFSIGVIAIFKLPAFYNENNLGAVSLLLLLFGYATFSWMYLLAGLFHETGMAFI
TYVCVNLFFGINSIVSLSVVYFLSKEKPNDPTLELISETLKRIFLIFPQFCFGYGLIELS
QQQAVLDFLKAYGVEYPSETFEMDKLGAMFVALVSQGTMFFLLRLLINEWLIKKLRLFFR
KFASSPIMETVDEDEDVQAERLRVESGAAEFDLVQLHRLTKTYQLIHKKIIAVNNISLGI
PAGECFGLLGVNGAGKTTIFKMLTGDIIPSSGNILIRNKSGSLGHVDSHSSLVGYCPQED
ALDDLVTVEEHLYFYARVHGIPEKDIKETVHKLLRRLHLMPYKDKSTSMCSYGTKRKLST
ALALIGKPSILLLDEPSSGMDPKSKRHLWRIISEEVQNKCSVILTSHSMEECEALCTRLA
IMVNGRFQCIGSLQHIKSRFGRGFTVKVHLKNNKVSMENLTRFMQLHFPKTYLKDQHLSM
LEYHVPVTAGGVANIFDLLETNKTALNITNFLVSQTTLEEVFINFAKDQKSYENVDTSSH
GSTISVDSQDDRIES
NT seq
7788 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccagtttcatcagcttcggatcctggtgtggaagaattggctaggtgtcaaa
aggcagccgctttggacacttgtcttgatcttatggccagtcattattttcataattctg
gctattacccggaccaaatttccaccaacagcaaagccaacttgttacctcgcacctcga
aaccttccaagtgctgggttcttcccattcctccagaccctcctgtgcgacacagactcc
aagtgcaaagacactccctatggaccacgagatctgctccgcagaaagggcatcgatgcg
gcactgtttaaggacagtgaaattccgaaaaagtcatccaacccagagagggacagcaat
ttatcactccagagcacccaagttccagaaagaagtcacacatcactggccacattacct
cctagaccaagttctgattcagaaggaatgggcacagacattttcaatggcagccaactg
ctcacacacatccttgatttggaaaagctgctgaaacaaaactcaacttcagaagagata
cgcagagagctgtgcacgagctacccaggctacactgcagagtacgccttctcgtggctc
actctagggaaaaatgtgcttaacaagttttgcctttcgaacatgacaattttagagtct
tctctccaggaactaaaatatcaggtctctcagatgtcgcatgaccctgacaaccagaag
agagtgttccagggacttgcccaggtgctatcctttttctcccaagtgcagcagagaaga
gaagtgtggcaactgctgtcgagttttccagacgtgtttcggaatgacacctcactgagc
gctctgtttggccttcttcgaaaggcaaacagggtgctgctggtagtgcagaaggttcac
ccacgtgttcaaaacgacgaaggattcagcaccctccagaagtctgttaaacatctgctg
aacactctggactccccagcacaaggtgacaattcaacgcacatgtggagcggtgatgat
gaacaggcattgtctccaagcagtctggctgcccagctcctgatcctggaaaattttgaa
gatgccatcttgaacatatcatcaaatagtccgtattctccttacctggcatgtataaga
aatatgactgatgacttggcccggggatccccagataatctaagacttctccagtccacg
attcgcttcagaaaatcttttcttcaaaatggctcctatgaggatgacgtccctccattt
cctgaagtcctgaaatccaagctgtctcagcttcgaaacctgacagaacttctctgtgaa
tcagagactttcagctggatcgagacctcttgccagctgtctgaggcgagcttcagcagg
ctgtgtgaagaccacgcctttcatgtgcagctgattgaagccgctgagctgggcgctgat
ctcatcactgccttgctggaccacgacaacatcatctctgcaaaactgagggatttgctt
actggagatcccagcaaaattaatctaaatatggactggctcctggaacaggcgttgcaa
atgaattacttggaaaatatcacgcagttaataccaactgtagaggccatgctgcatgtc
aacaccagcgtggatgcttctgagcgaccaggccaattaatagagatgtttaaaaacgtt
gacgagttgaaagaagagctgagggcaatgggaatgtccaacaccagtgtcgacaagctg
ctagccattcccatcccggacaacagagctgagataatttctcgtgtattctggttgcat
tcatgtgatgcaaatgtcaccaaccccaaacttgaagatgccatgaaggaattctgcaag
ctgccccttccagagagatcacaccagtcctacctcattggactcacccttctgcactat
ttagacatctacaatttcacatacaaggtgtttttcccaaggaaagatcaaaagccagtg
gaaaggatgatggagcttttcataaagctgaaaaggatcctcaatcagttggcttccggc
gcacatcccctgctggacaaaatgagatccctgaaacaaatgcatctgcccaagagtgtt
ccattaacacaggctatgtacagaggcacccgaatgaacacgcccgcaggatccttcagc
accatctcccaagctctctgttcccaagggatcaccacggagtatttaacctccatgctg
ccttcttcccagaagccgaaaggcaaccacaccaaggattttctaacttataagttaacc
aaagaagagattgctgcaaaatacggaattcccttaagcgctacaccattttgcttctct
ctttataaagacatcatcaacatgcctgctggacctgtgatttgggctttcttaaaacct
atgttgttgggaaagattttgtatgcaccatataatccaactacaaaggccattatggaa
aagtccaatgtaactctgagacagctggcagaattgagagaaaaatctcaggagtggatg
gataaatcaccaatcttcatgaattccttccacctgctaaaccagacaattccaatgctc
cagaatactctaaggaacccctttgtgcaagtttttgtaaagttctctgtgggactcgat
gctgtcgaactcctgaagcagattgacgaccttgatgttctcaggctgaagctggagaac
aacattgacatcatcgatcagctgaacacgctgtcgtccctgacggtgaacatttcctcc
tgtgtactgtatgaccgcattcaggcagcggacaccgtggaggaaatggagctggtagct
gaaaagctttacaaaagcaacgagctctttggaagtgtcatttttaagcttccatccaac
agaggttcacacaggggctacggctctgaaaatatctctcttcctcctatcgtaaaatat
acaatccgcatgagtctgaagactgcacagaccacaaggagcataaggaccaagatttgg
gccccgggaccacacaattctccatcacacaaccagatctatggccgggctttcatttac
ttacaagatagtattgaaagagcaatcattgaattacaaacaggaaggaattcacaggaa
gttgctgtccaggttcaagcagttccctatccctgcttcatgaaagataatttcctcacc
agtgtgtcctactctcttcccatcgtgctcatggtcgcctgggttgtctttatcgctgcc
tttgtgaaaaagcttgtgtatgagaaggaccttcggctccatgagtacatgaagatgatg
ggtgtgaactcctgcagccatttctttgcctggcttatagagagtgttggatttttactg
gttactattgcaatcctcatcgtcatactcaagtttggcaatattcttcccaaaacaaat
ggcttcattttgttcctatacttttcggactacagtttctcagtgattgccatgagctac
ctcatcagtgtgttcttcaacaacaccaacattgcagctctgattggaagcctgatctac
gtcattgccttttttccatttattgttctggttacagttgaggatgagttgagctatgtt
ataaaagtattcatgagcctgctgtccccaacagcattcagctacgcaagccaatatatt
gcacgatatgaagaacagggtgtgggtcttcaatgggaaaatatgtacaagtcccccgtt
caggacgataccacctcatttggctggctgtgttgcctaattctagcagacgctttcatt
tatttctttattgcttggtacgtcaggaatgttttcccagggacatatggcatggcagct
ccgtggtattttccagtccttccttcctattggaaagagcaatttggatgcgccgaggtg
aagcgtgagaaaagcaatggccttatgtttaccaatatcatgatgcagaacaccaaccct
tctgccagtaagataagtcctgattgtgcattcccccccaacattgaacccgaacctaaa
gatctccaagttggagttgcccttcatggggtcacgaagatgtacggcacaaagacggct
gttcaaaacctcaacctgaacttctacgaagggcacatcacatcattgttgggtccaaac
ggagctggaaaaaccacaaccatctccatgctgactgggctgtttagtgcctcagcaggt
actatttttgtatatggaaaagatatcaagacagacctgaatactgttcggaaaaacatg
ggagtctgcatgcagcatgacgtcttgttcagttacctcaccaccaaggagcatcttctc
ttatatggctccatcaaagtccctcactggaccaaaaagcagctccatgaggaggttaaa
aggactttaaaagacactggactgtatagccatcgccataaaagagttgggacattgtcg
ggaggaatgaagaggaaattgtccatttctatcgctctcattggtggatcaagggtagtg
attctggatgaaccctccactggagttgacccgtgttctcgtagaagcatatgggatgtc
atatccaagaacaaaactgccagaacaatcattctgtcaacacaccacttggatgaggct
gaggtgttgagtgaccgcattgccttcctggaacagggtgggctccgatgctgtggatca
ccattttacctcaaggaagcttttggggatggctaccacctcacactcaccaagaagaag
agtcccaatctagatacaaacaccctctgtgacacaggggccgttacagccatgatccag
tcacacctcccggaagcctacctcaaggaggacatcgggggagagcttgtgtacgtactc
cctccgtttagcacgaaggtctccggtgcttacctgtcactcctgagagcgctggacaaa
ggcatgggtaaactcaacatcggctgctatggcatttccgacaccactgttgaggaggtc
ttcctaaacttgacaaaagattcacaaaaaagtggtaacatgagtctcgaacacttaacg
cagaggaaagtcgggagtcccagtaccaacggcacctccacccccgacgacttatctgtg
agcagcagcaacttcacagacagagacgacaaagtcctgacaaggagcgagaagctggat
ggcttcggcctgttactgaagaagataatggctattctcatcaagaggttccaccacact
cgcaggaactggaaaggtctcatcgcccaggtcgtcctccccatcgtcttcgtagccact
gccatgggccttggcacactgagagattccagcaacagttatcccgagatcctgatctct
ccatccatttatggcacctccgaacagacagccttctacgcgaattttgacccaagcacg
aacgccctggtctcagcactatggaacttccctggcattgacaatgtgtgtttgaataca
agtaactcgcagtgttttaaaaaagacagtctgggaaaatggaacacgagtggagaagct
attgacaactttggtgtttgctcctgttcagacaatgtccaggaatgccctaaatttaac
tattccccacctcatagaagaatttattcttcccaagttatctataacctcactggaaac
cacatggaaaattatcttatatcaactgcaaatcgttttgtgcagaaaagatacggaggt
tggagtttcggcctgaatttgactaacgaccttcgttttgatataacagcagttcccgtc
aatagaactcttgccaaggtgtggtatgacccagaaggctaccactccctcccggcttac
ctcaacagcctcaacaacttcctgctgagagttaacatgtcagagcatgatgctgcccgg
cacgggatcatgatgtacagccatccttatccaggggtgcaagaccaggagcaagccaca
atcagcagtttaatcgatattttggtggcgctgtccatcctgatgggctactctgtcacc
acggccagctttgtcacctacattgtcagggagcatcagaccaaagccaagcaactacaa
cacatttctggcattggtgtgacatgctactgggtgacgaatttcatctacgacatggtc
ttctacttggtccctgtagcattttcaattggtgtcatcgcgattttcaagctacctgcc
ttctataatgaaaacaatctaggcgctgtgtctcttctacttctgctgtttggctatgca
accttttcttggatgtatttgctggctggtctcttccatgagacaggaatggccttcatc
acctacgtctgtgtcaacctgttttttggcatcaattccattgtttccttgtcggtggtg
tacttcctttccaaggaaaaacctaatgatccgactctagaacttatttctgaaaccctg
aagcgaattttcctgatattccctcaattctgttttggctacggtttgattgaactctct
cagcaacaagcagtcctggatttcttaaaggcatatggcgtggaatatccaagtgaaacc
ttcgaaatggataagctaggtgcaatgtttgtggctttggtttctcagggcaccatgttt
ttcttgctgcgactcctcatcaatgaatggctgataaagaagctcaggctcttcttcaga
aaatttgcatcttcccccatcatggagacagtagatgaagacgaagatgtgcaggctgag
agactaagagtcgagagtggtgcagctgagtttgacctggtccagctccatcgactcaca
aagacctatcaacttatccacaaaaagataatagccgttaacaacatcagccttgggata
cctgctggagagtgctttggcctccttggtgtgaacggagcagggaaaaccactatattt
aagatgctgactggagacataattccttccagtggaaacattctgatcaggaacaagagc
ggatcgctgggtcatgtggattctcacagctcattggttggctactgccctcaggaggat
gccttagatgacctggtaacggtggaagaacacttgtatttctatgccagagtgcatggg
attccagagaaagacatcaaagaaactgttcataaactccttaggagacttcacttgatg
ccctacaaggacaaatctacctccatgtgcagctatggcacaaaaagaaaactgtccact
gccctggccttaatagggaaaccgtcgatcctcctgctggatgaaccgagctctgggatg
gatcccaagtcaaaacgccacctgtggaggatcatttcagaagaggtgcagaataaatgc
tctgtcatcctcacatctcacagcatggaagaatgtgaagccctttgtacccggctggcc
attatggtgaatggaagattccagtgcattggatctttgcaacatataaagagcaggttt
ggacgtggatttactgtcaaggttcacttgaaaaataataaagtgagcatggaaaacctc
acaaggtttatgcagctgcactttccaaaaacatacttaaaagatcagcaccttagcatg
ctagagtaccatgtgccggtcacagcaggaggagtagcaaacatttttgaccttctggaa
accaacaagactgctttaaatatcacaaatttcctcgtgagccagaccactctggaagag
gttttcatcaacttcgccaaagaccaaaaatcctatgaaaatgtcgataccagtagccat
ggttccaccataagtgtagactcacaggatgaccggatagaatcctag
DBGET
integrated database retrieval system
