Peromyscus leucopus (white-footed mouse): 114693938
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Entry
114693938 CDS
T07241
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 9-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114693938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114693938
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114693938
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
ARM_PUB
Polyoma_coat
Motif
Other DBs
NCBI-GeneID:
114693938
NCBI-ProteinID:
XP_028726347
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Position
5:complement(67017218..67018150)
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AA seq
299 aa
AA seq
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MHSLAMAGPVPTALAQVDREKIYQWINELSSPETRENALLELSQKRESVPDLAPMLRHSC
GTIAALLQEIVNIYPSINPPTSTARQSNRVCNALALLQCVVSHPETRSALLAAHIPXFLY
PFLHTVSKTRPFEYLRLTSLRVIGALVKTDEQEVINFLLTTETIPLCLRIMESGRELSKT
VATFILQKILLDDTGLAYICQTDECFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLS
DNPRAREALRQCLPDQLKDTTFAQVLKDDTTKKRWLAQLVKNLQESQVTDPWGIPLPPQ
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcctggcgatggcagggcctgtgcctactgcactggcccaagtggacagagag
aagatctatcagtggatcaatgaactgtccagtcctgagacgagggaaaatgctttgcta
gagctaagccagaagcgagagtctgtccctgacctggcacccatgctgaggcattcatgt
ggtactattgcagcacttttacaggaaattgtaaatatttatccatctatcaaccctcca
acttcgacagcacgccagtctaacagagtttgcaatgctttagcgttgctgcagtgtgtg
gtctcacacccggagaccaggtcagctcttcttgcagcacacatcccancttttttgtac
ccctttttgcacacagtcagcaaaactcgtccctttgaatatcttcggctcaccagcctc
agagttattggggccttggttaaaacagacgaacaagaagtaatcaactttttattgaca
acagaaaccatccctttgtgtttgcgcattatggaatctggacgtgaactttctaaaacg
gttgccacatttatcctccagaagatcctcttggatgacactggtttggcctatatttgt
cagacagatgagtgtttttcccatgttgccatgatcttgggtaaaatggtcctgcagcta
tccaaagaaccgtctgcccgtctactgaagcatgtagtaagatgctaccttcgactctca
gataatcccagggcacgtgaagcactcagacaatgcctccctgaccagctgaaggacaca
acctttgcccaggtgctaaaagatgacaccaccaagaaacgctggcttgcacagctggtg
aagaacctgcaagagagccaggtcactgatccctggggaatccccctgcctcctcaatga
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