KEGG   Peromyscus leucopus (white-footed mouse): 114694011
Entry
114694011         CDS       T07241                                 
Symbol
Sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Pathway
pleu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114694011 (Sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pleu03041]
    114694011 (Sf3a1)
Spliceosome [BR:pleu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    114694011 (Sf3a1)
 Complex B
    114694011 (Sf3a1)
 Complex C
   U2 SnRNP specific factors
    114694011 (Sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 114694011
NCBI-ProteinID: XP_028726495
LinkDB
Position
7:complement(115329919..115352860)
AA seq 793 aa
MPAGPVQAVPPPPPVATEPKQPVEEEASSKEESTPSKPVVGIIYPPPEVRNIVDKTASFV
ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQ
QQATQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQ
FLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFAKLKKEAENPREVL
DQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTT
PEELGARILIQERYEKFGESEEVEMEVESDEEDEKQEKAEEPPSQLDQDTQVQDMDEGSD
DEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKI
PASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVE
ETAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDD
TKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPAMPPPVRTTVVSAVPVMPRP
PMASVVRLPPGSVIAPMPPIIHAPRINVVPMPPAAPPIMAPRPPPMIVPTAFVPAPPVAP
VPAPAPMPPVHPPPPMEDEPPSKKLKTEDSLMPEEEFLRRNKGPVSIKVQVPNMQDKTEW
KLNGQGLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMASGAV
IHLALKERGGRKK
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgccggccggacccgtgcaggcggtgcctccgccgccgccagtagccactgagcccaaa
cagccagttgaagaagaagcatcgtcaaaggaggaatccacaccttccaagccagtggta
gggattatttaccctcctccggaggtcaggaatatcgttgacaagactgccagttttgtg
gccagaaatgggcctgaatttgaagccaggatccgacagaatgagatcaacaaccccaag
ttcaacttcttaaatcccaatgacccttaccatgcttactaccgccacaaggtcagcgag
tttaaggaggggaaggctcaggaaccctcagctgccatccccaaggttatgcagcagcag
cagcaagccacccaacaacagctgccccagaaggtccaagcccaggtgatccaagagacc
atagtaccgaaggagccccctcctgagtttgagttcatcgctgatcccccctctatctca
gcctttgacctggatgtagtgaagctcacagctcagtttgtggccaggaatgggcgccag
tttctgacccagctgatgcagaaggagcagcgcaactaccagtttgactttctccgccca
cagcacagcctcttcaactacttcacaaagctggtggagcagtataccaagatcttgatt
ccacccaaaggcttatttgcaaagctcaaaaaagaagctgaaaatcctcgagaagtattg
gaccaggtgtgttaccgagtagaatgggccaaattccaggaacgtgagagaaagaaggaa
gaagaagagaaagagaaggaacgggtggcctatgctcagatcgactggcatgattttgtg
gtggtggagaccgtggatttccaacccaatgagcaagggaacttcccacccccaacaaca
ccagaggaactgggagcccgaatcctcattcaagagcgctatgagaagtttggggaaagc
gaggaggtggagatggaggttgagtccgatgaggaagatgagaagcaggaaaaggctgag
gaacctccttcccagctggaccaggatactcaagtacaggacatggatgagggttcagac
gatgaggaagaaggacagaaagtgcctccacccccagagacacccatgcctccgcctttg
cccccaactccagaccaagtcattgtgcgaaaggactatgaccccaaagcttccaagccc
cttcctccagctcctgctcctgatgagtatcttgtatcccccatcactggggagaagatt
cctgccagcaagatgcaagaacacatgcgtattgggcttcttgacccccgctggctggag
cagcgggatcgctctatccgagagaaacagagtgatgacgaggtttatgcaccgggtctg
gacattgagagcagcttaaagcagttggctgaacgccgtactgatatctttggggtagaa
gaaacagccattggtaagaagattggggaagaggagatccagaagccagaagaaaaggtg
acttgggatggccattcaggtagcatggcccggacccagcaggctgctcaggccaacatc
accctccaggagcagattgaggccatccataaggccaagggcctggtgccagaagatgat
actaaggagaaaattggccctagcaagcccaatgaaattccccagcagcccccacctcca
tcttcagccaccaacatccccagctcagcaccccccatcacatcagtgccccggccacct
gcgatgccgcctccagttcgtaccactgttgtatctgctgtacctgtcatgcctcggcca
cctatggcgtctgtggtccggctgcctccaggctccgtgatcgctcccatgccacctatc
atccatgcacccaggatcaatgtggtacccatgcctcctgctgcacctcccatcatggca
ccccgcccacctcccatgattgtgccaacagcctttgtgcctgccccacctgtggctccg
gtcccagccccagccccaatgcctcctgtacaccccccacctcctatggaagatgagcct
ccatccaagaaactcaagaccgaggacagcctcatgcctgaggaagagttcctgcgcagg
aacaagggtccagtgtctatcaaagtgcaggtacccaacatgcaggataagacggaatgg
aagctgaatgggcaggggctggtcttcactctcccactcacagaccaggtctctgtcatc
aaagtgaagattcatgaggctacaggcatgcctgcagggaaacagaaactacagtatgaa
ggcattttcatcaaggattccaactccctggcttactacaacatggccagtggtgctgtc
atccacttggctctcaaggagagaggcggcaggaagaagtag

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