KEGG   Peromyscus leucopus (white-footed mouse): 114694414
Entry
114694414         CDS       T07241                                 
Symbol
Dctn1
Name
(RefSeq) dynactin subunit 1 isoform X1
  KO
K04648  dynactin 1
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Pathway
pleu04814  Motor proteins
pleu04962  Vasopressin-regulated water reabsorption
pleu05014  Amyotrophic lateral sclerosis
pleu05016  Huntington disease
pleu05022  Pathways of neurodegeneration - multiple diseases
pleu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    114694414 (Dctn1)
 09150 Organismal Systems
  09155 Excretory system
   04962 Vasopressin-regulated water reabsorption
    114694414 (Dctn1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    114694414 (Dctn1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    114694414 (Dctn1)
   05016 Huntington disease
    114694414 (Dctn1)
   05022 Pathways of neurodegeneration - multiple diseases
    114694414 (Dctn1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pleu04131]
    114694414 (Dctn1)
   03036 Chromosome and associated proteins [BR:pleu03036]
    114694414 (Dctn1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pleu04812]
    114694414 (Dctn1)
Membrane trafficking [BR:pleu04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Rab associated proteins
    114694414 (Dctn1)
Chromosome and associated proteins [BR:pleu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Dynactin complex
     114694414 (Dctn1)
Cytoskeleton proteins [BR:pleu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dynactins
     114694414 (Dctn1)
SSDB
Motif
Pfam: Dynactin CAP_GLY Filament
Other DBs
NCBI-GeneID: 114694414
NCBI-ProteinID: XP_028727161
LinkDB
Position
3:98996592..99029505
AA seq 1281 aa
MAQSKRHAYNRTPSASRMSAEAGARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGV
ILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQVFEDGADTTSPETPDSSASKVLKRE
GADAAAKTSKLRGLKPKKAPTARKTTTRRPKPTRPASTGVSGASSSLGPSGSASAGELSS
SEPSTPAQTPLAAPIIPTPALTSPGAAPPLPSPSKEEEGLRAQVRDLEEKLETLRLKRSE
DKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADT
ADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEIFKAEIEEKGSDGAASSYQL
KQLEEQNARLKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVVRQQRERLQEELGQAE
STIDELKEQVDAALGAEEMVEMLTDRNLNLEEKVRELRETVGDLEAMNEMNDELQENARE
TELELREQLDMAGARVREAQKRVEAAQETVADYQQTIKKYRQLTAHLQDVNRELTNQQEA
SVERQQQPPPETFDFKIKFAETKAHAKAIEMELRQMEVAQANRHMSLLTAFMPDSFLRPG
GDHDCVLVLLLMPRLICKAELIRKQAQEKFDLSENCSERPGLRGAAGEQLSFAAGLVYSL
SLLQATLHRYEHALSQCNVDVYKKVGSLYPEMSAHERSLDFLIELLHKDQLDETVNVEPL
TKAIKYYQHLYSIHLAEQPEDSTMQLADHIKFTQSALDCMGVEVGRLRAFLQGGQEATDI
ALLLRDLETSCSDIRQFCKKIRRRMPGTDAPGIPAALAFGSQVSDTLLDCRKHLTWVVAV
LQEVAAAAAQLIAPLAENEGLPVAALEELAFKASEQIYGSPSSSPYECLRQSCSILISTM
NKLATAMQEGEYDAERPPSKPPPVELRAAALRAEITDAEGLGLKLEDRETVIKELKKSLK
IKGEELSEANVRLSLLEKKLDSAAKDADERIEKVQTRLEETQTLLRKKEKDFEETMDALQ
ADIDQLEAEKAELKQRLSSQSKRTIEGLRGPPPSGIATLVSGIAGEEQQRGGTPGQAPGA
LPGPGLVKDSPLLLQQISAMRLHISQLQHENSVLKGAQMKASLAALPPLHVAKLSLPPHE
GPGGDLVDGALYRKTSQLLETLNQLSTHTHVVDITRASPAAKSPSAQLMEQVVQLKSLSD
TIERLKDEVLKETVTQRPGATVPTDFATFPSSAFLRAKEEQQDDTVYMGKVTFSCAAGLG
QRHRLVLTQEQLHQLHSRLIS
NT seq 3846 nt   +upstreamnt  +downstreamnt
atggcccagagcaagaggcacgcgtacaatcggacgccgagtgccagcaggatgagtgcg
gaagcaggtgcccggcccctgcgggtgggctcccgtgtagaagtgattggaaaaggccac
cgtggcactgtggcctatgttggagccacactctttgccactggcaaatgggtgggcgtg
atcctggatgaagcaaaaggcaagaatgatggcactgtccagggaaggaagtatttcaca
tgtgatgaaggccatggcatcttcgtacgccaatcccagatccaagtatttgaagatgga
gcagatactacttcaccagagactcctgactcttctgcttcaaaggtcctcaagagagag
ggagcagatgcagctgcaaagaccagcaaactgcggggactgaagcctaagaaggcaccg
acagcccgaaagaccacaactcgacggcccaagcctactcgcccagccagtactggagtg
tcgggggccagcagctccctgggcccctctggatcagcatcagccggtgaactaagcagc
agtgagcccagcaccccagctcagactccgctggcagcacccatcatccccacaccagcc
ctcacctctcctggagcagcacccccacttccttctccctctaaggaggaggaagggctg
agggcccaggtgcgggacctggaggagaaactggagactctgcgtctgaagcggtcagaa
gacaaggcgaagctgaaagagctggagaagcacaagatccagctggagcaggtgcaggaa
tggaagagcaaaatgcaggagcagcaggcagacctgcagcggcgcctcaaagaggcgcgg
aaggaagccaaggaggcgctggaggcaaaggagcgctacatggaggagatggccgacaca
gctgacgccatcgagatggccactctggacaaggagatggctgaggagcgcgctgagtct
ctgcagcaggaggtggaggctctgaaggaacgcgtggacgagctcactacagacttggag
atcttcaaggctgagatcgaagagaaaggctcagacggggctgcatccagctaccagctc
aagcagctcgaggagcagaatgcccgcctaaaggacgccctggtgaggatgcgagatctc
tcttcctcagagaagcaggagcatgtgaagctgcagaagctcatggagaagaagaaccag
gagctggaggtcgtgaggcagcagcgggagcgtctgcaggaggagctgggtcaggcggag
agcaccattgacgagcttaaggagcaggttgatgctgcgctgggtgcggaggagatggtg
gagatgctgactgaccggaacctgaatctagaagagaaagttcgggaactgcgggagacc
gtgggggatttggaagcaatgaacgagatgaatgatgagctgcaggagaatgcgcgggag
acagagctggagctccgtgagcagctggacatggcaggagcccgagtccgggaggcccag
aagcgcgtggaagcagcccaggagacagttgccgactatcagcagaccatcaagaagtac
cgccagttgaccgcacacctgcaggatgttaaccgagagctgacgaaccagcaggaagcg
tctgtggagagacagcagcagccacctcccgagactttcgatttcaaaatcaagtttgcc
gagaccaaggctcatgccaaggccattgagatggagttgagacagatggaggtggcccag
gccaaccggcacatgtccctgctgacggccttcatgcctgacagcttccttcggccaggc
ggagaccacgactgtgtcctggtgctgctgctcatgccccgcctcatatgcaaggcagag
ctcatccggaagcaggcccaggagaagtttgacctaagcgagaactgttcggagcggcct
gggctccgaggagctgctggggagcagctgagcttcgctgcgggcctggtgtactcgctg
agtctgctgcaggccacgctgcaccgctatgaacatgccctctcccaatgcaacgtggac
gtgtataagaaggtgggcagcctctaccctgagatgagtgcccacgaacgctccttagat
ttcctcatcgagctgctgcacaaggatcagctggacgagactgtcaacgtggagcccctc
accaaggccatcaagtattaccagcatctgtacagcatccaccttgctgaacagcccgag
gattccaccatgcagctggctgaccacatcaagttcacccagagtgccctggactgtatg
ggcgtggaggtgggccggctgcgtgccttcctgcagggtgggcaggaggcaacagatatt
gcccttcttctccgagacctggaaacatcatgcagtgacatccgccagttctgcaagaag
atccgaaggcgaatgccagggacagatgctcctgggatcccagcggcactggcctttgga
tcacaggtatccgacacactcctcgactgcaggaagcacttgacgtgggtggtggcggtt
ctgcaggaggtggcagctgccgccgcccagcttattgcccccctggcagagaatgaaggg
ctgcctgtggctgcgctggaggagctggctttcaaagccagcgagcagatctacgggagc
ccctccagcagcccctatgagtgcctgcgccagtcatgttccatcctcatcagcaccatg
aacaagctggccacggccatgcaggagggcgagtacgacgcagagcggccacccagcaag
cctcctccagttgaacttcgggctgcagccctgcgtgcagagatcacggatgctgaaggt
ctgggtttgaagcttgaagaccgagagacagttatcaaggagttaaagaagtcgctcaag
attaagggggaggagctgagtgaggccaacgtgcggctgagcctcctggagaagaagctg
gacagcgctgccaaggatgcagacgagcgcatcgagaaggtccagactcggctggaggag
acccagaccctgctgcggaagaaggagaaagactttgaggagacaatggatgcgctccag
gctgacatcgaccagctggaggcagagaaggccgaactaaagcagcggctgagcagccag
tccaagcgcacaattgaggggctccggggcccccctccctcaggcatcgctaccctggtc
tctggcattgctggtgaagaacagcagcgagggggcactcctgggcaggctccgggcgcc
ttgccaggcccggggctggtgaaggactcaccactgctgcttcagcagatctctgccatg
aggctgcacatctctcagctccagcatgagaacagcgtcctcaaaggagcccagatgaag
gcgtccttggccgctctgccccctctgcatgttgcgaagctttccctcccaccccatgag
ggccctggtggcgacctagtggatggggccctgtatcgcaagaccagccagctgttggag
acgctgaatcagctgagcacgcacacccacgtggtagacatcactcgagccagtccagcc
gccaagagcccgtcagctcagcttatggaacaggtggttcagctcaagtccctgagtgac
accatcgagaggctcaaggacgaggtcctcaaggagacagtaactcagcgtcccggagcg
accgtccccactgactttgccaccttcccttcttcagccttcctcagggccaaggaggag
cagcaggacgacacagtctacatgggcaaagtgaccttctcgtgtgcggcaggcctggga
cagcgacaccgcctggtgctgacccaggagcagctgcaccagctccacagccgcctcatc
tcctaa

DBGET integrated database retrieval system