Peromyscus leucopus (white-footed mouse): 114694488
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Entry
114694488 CDS
T07241
Symbol
Katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pleu04812
]
114694488 (Katnb1)
Cytoskeleton proteins [BR:
pleu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
114694488 (Katnb1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
RMC1_N
WDR54
eIF2A
Beta-prop_IP5PC_F
Beta-prop_LRRK2
PROPPIN
Beta-prop_NWD2_C
VPS8_N
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
114694488
NCBI-ProteinID:
XP_028727270
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All DBs
Position
5:86420989..86440858
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AA seq
655 aa
AA seq
DB search
MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT
GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV
ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK
MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN
PDGCCLYSGGQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVV
DLTRVTRTGTVTQDPVQASQPLTQQTPTPGVPLRRIYERPSTTCSKTQRVKHNSESERRS
PSSEDDRDERESRAEIQNAEDYNEIFQPKNSISRTPPRRSEPFPAPPEDDTATAKEASKP
SPATDVPVPVPNLEGPARPPVLTSTPAPKSEPVVIPATRNEPIGLKASDFLPAVKVPQQA
ELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTTGDIKTSVDSAVAINDLSVVVDL
LNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAAP
PSVGVDISREERLHKCRLCFKQLKNISGLVKSKSGLSGRHGSAFRELHLLMASLD
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggccacccctgtggtcaccaagactgcctggaagttgcaagagatcgtcgcccatgcc
agcaatgtgtcctcgttggtgctgggcaaggcctcagggcggctcttggccactggtggg
gatgactgccgcgtcaacctgtggtccatcaacaagcctaactgcatcatgagcctgaca
ggtcacacgtcccctgtggagagtgtccgcctcaacacccctgaagagctcatcgtagcc
ggttcccagtcaggctccatccgcgtctgggacctggaagctgccaaaattctccgcaca
ctcatggggcacaaagccaacatctgcagcctggatttccacccctatggcgaatttgtg
gcctcaggttcccaggacacaaatatcaagctctgggacatcaggaggaaaggctgtgtc
ttccgatacaggggccacagccaggctgtgcggtgtcttcggttcagccctgatgggaag
tggctggcatcagcagcagatgaccacaccgtgaagctctgggatctgacggccggcaag
atgatgtctgagttccctggccacacagggcccgtcaacgtggtggagtttcaccccaac
gagtatctcctagcttctggcagctccgacaggacaatccgcttctgggacctggagaag
ttccaggtggtgagctgcattgaaggggagccagggcctgtcaggagcgtcctcttcaac
cccgatggctgctgcttgtacagcggcggccaggactcgctgcgtgtctatggctgggag
cccgagcgctgctttgatgtggtccttgtcaactggggcaaggtggctgacctggccatc
tgcaatgaccagctgataggtgtggccttctcccagagtaacgtatcctcttacgtggtg
gacctgacgagagtcaccaggacaggcactgtgacccaggaccccgtgcaggccagccag
cccctgacacagcagacccccacccccggggtccccctccgccgcatttacgagcggccc
agcacaacctgcagcaagactcagagggtaaagcacaattcagagagtgagcggcgcagc
cccagcagcgaagacgacagggacgagcgtgagtcccgggccgagattcagaatgccgag
gactacaatgagatcttccagcccaagaacagcatcagtcggacaccgccccggagaagt
gagcccttcccagctcccccagaggatgacacagccacagccaaggaggcctcaaaaccc
agcccagccacggatgtgccggtgccggtgccaaatctcgagggcccagcccggcctcca
gtcctgacttccactcctgcccccaagagcgagcctgtcgtcatccccgccacacggaat
gagcccattggcctaaaggcctcggacttcctgcccgccgtgaaggtccctcagcaggca
gagctggtggatgaggacgccatgtcacagatacgcaagggccacgacaccatgtgtgtg
gtgctcaccagccgccacaagaacctggacactgtgcgggctgtgtggaccacaggagat
atcaagacctcagtggactctgcagtggccatcaatgacctgtccgtggtggtggacctc
ctgaacatcgtcaaccagaaagcctccctgtggaagctggacctgtgcaccacagtgctg
ccccagattgagaaactcctgcaaagcaagtatgagagctacgtccagactgggtgcacc
tccctgaagctgatcctccagaggttcctgcccctcatcaccgacattttggcagccccg
ccttctgtgggcgtggacatcagccgagaggagaggctgcacaagtgccgactgtgcttc
aagcagctcaagaacatcagcggcctcgtcaagagcaagtcagggctgagcggccgccat
ggcagtgccttccgcgagctgcacctactcatggccagtttggactga
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