Peromyscus leucopus (white-footed mouse): 114694504
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Entry
114694504 CDS
T07241
Symbol
Nlrc5
Name
(RefSeq) protein NLRC5 isoform X2
KO
K22615
NLR family CARD domain containing 5
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pleu04054
]
114694504 (Nlrc5)
Pattern recognition receptors [BR:
pleu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
114694504 (Nlrc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atypical_Card
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
AAA_16
AAA
nSTAND3
NOD2_WH
AAA_22
AAA_25
Rtf2
Motif
Other DBs
NCBI-GeneID:
114694504
NCBI-ProteinID:
XP_028727297
LinkDB
All DBs
Position
5:85787673..85871080
Genome browser
AA seq
1839 aa
AA seq
DB search
MDPESLQLGTENLWAWLVRLLSENSAWLDAQVRFYLPTVDLDSSSKVPDPEIIRHQLRRL
YTQGLETWQSFIYSLCMELTVPLDLEVPLLSIWGQKDEFSKQIGAGEDSHPGPPLHHGVK
RPSQSCGSSPRRKHCRKEQLELAKKYLKLLKTSAQQYHGGVCMGAGRPQASPLAYVPPIL
QWSRAAAPLDAQEGATIGDPEAADDVDVSIEDLFNFRAHKGPRVTVLLGKAGMGKTTLAH
RLCWKWANGQLDRFQALFLFEFRQLNTITHLLTLPQLLFDVYLSPESESDAVFQYLGENA
HQVLLIFDGLDEALHAGSMGPDSAGSVLSLFSDLCRGTLLPGCWVMATSRPGKLPACVPT
EAAMVYMWGFDGLRVEKYVSHFFSDLLSRELALAEVRSNERLRGMCAVPALCGVACFCLR
RLLPGSPPGQSTVLLSTVTQLYLQMVETFNPNGTLPATSLLDLGKVALKGLDTGKVIFSM
ADIPPPLMAFGAVHGLLTSFCIRTDPEHQKIGYAFAHLSLQEFFAALYLMASDTVDKDTL
ICYVTLNSHWVLRTKARLDLSDNLPTFLAGLASHTCRPFLCHLARQDEAWVGSRQAAVVQ
VLRKLASRKLTGPKMIELCHCVAETQELELARFMAQSLPFRLSFHNFPLTRADLAALANV
LEHKAAPIHLDFDGCPLEPHCPEALIGCGQVENLSFKSRKCGDAFAEALGRSLPTLGSLK
TLGLTGSKITAQGISHLVQTLPLCSQLEEVSLHDNQLKDPEVLSLAELLPCLPKLQKLDL
SRNSFSMSTLLSLVKVAITCPTVRKLQVRESDLIFLLCLVTETAAQPSGASNLQDKDSLK
KEGQNRSLELRLQKCQLRVHDAETLVELFQKGPRLEEVDLSGNHLEDEGCRLVAEAASQL
QIAKKLDLSDNGLSRTGVTYVLRAMSTCGTLEEMHISLLSNTVVLTFAQEPREQERSWKR
DAPLTSFVCPVASEMSQSSRRIRLTHCGFLAKHTERLCRALSTSCQLHRLDHLDLSDNSL
GDEGVAQLAQLLPGLSGPLQSLTLSRNGVSLDAVFGLIPCMSSVPWVFHLDVSLESDHIL
LRGAGTDRDALAGRCGPGFPAGAPELEFSPRFSSRSFRLQGCQLEPRSLACLCAPLEKCP
GPLEVHLSCKTLSDESLKTLLECLPKLPQLSLLQLNNTVLSSRSPFLLADVFNLCPRVQK
VNLRSLCHADLHFGSKEEQEGVCFGFPGCSLGQEHMEPLCSALSRCTVLSQLDLTGNLLN
DSGLRCLLECLPQLPISGWLDLGHNSISQEGVLCLLETLPSCPRVCEISVSLGSEQSFRI
RMSKEEEAWATLRLCECSFSPEHVSRLASSLSQAQQLSELLLTRCHLDLPQLIHLLNLVN
RPAGLLGLRLEEPWVGHVSLPAVMEVCAQASGRLTELSLSETQQQLRLQLEFRHQEDKSE
AMANRLAHCDLGTDHSLLMTQMMETCARLQQLSLSQVNFSDDDDTRSRLLQNLLLSSCEL
KSFRLTSSCVSTESLTHLASGLGHCQHLEELDFSNNHLCEENIELLMGALQGTCRLKKLH
LGHFPLEASSLALLIQGLSHMTLLQHLSLKHNQIGDVGTQNLAAILPRLPGLRKLDLSGN
SIGPAGGVPLAKSLTHCGCLEEIILGNNALGDPTALGLAQRLPPQLRVLCLPSSHLGPEG
ALGLAQALKQCPHIEEFSLAENNLAGRVPYFCKSLPRLRKIDLISCKIDDQAAKHLATSL
MFCPALEEILLSWNLLGDEVAAELAQVLPQMGQLKRVDLEKNRITACGAQLLAHGLVQGS
CVPVIRLWNNPIPADVAQSLQSQEPRLDFAFFDQQPRAL
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atggaccctgagagccttcaactgggcactgagaacctgtgggcctggcttgtgaggctg
ctgagtgaaaactcagcatggctggacgcccaggttaggttctacctcccgaccgtggac
ctggactccagcagcaaggtccccgatcctgagatcattcgtcatcagctcaggaggctg
tacacccagggcctggaaacgtggcagtctttcatctatagtctgtgcatggagcttact
gtgcctctagacctggaagtaccactgctgagcatctggggccagaaagatgaattctct
aagcagataggagctggtgaggacagccatcctggacctccgctgcaccatggtgtcaag
cgcccttctcagagctgtgggtcctccccccgccggaagcactgcaggaaagagcagcta
gagctggctaagaagtacctgaaactcctaaagacctctgcccaacagtaccacggtggt
gtgtgcatgggagcaggacgtcctcaggcctccccactggcctatgtccccccaattctg
cagtggagccgggctgcagcacccttggatgctcaggagggagccactatcggagacccg
gaggcagcagatgacgtcgatgtgagcatcgaagatctcttcaacttcagggcccacaag
ggccctcgagtgacagtactgctgggaaaggctgggatgggcaagaccactctggcccat
cgactctgctggaagtgggctaacggccagctggaccgcttccaggctctgttcctcttt
gagttccgccagctcaacacaatcacacatttgctgacactgccccagctcctttttgat
gtgtacctgagcccggagtcagagtctgatgctgtttttcagtacctgggggagaatgcc
catcaagtgctactgatctttgatgggctggatgaggcactccatgctggttccatgggt
cctgacagtgcaggctcggtcctctccctgttctctgacctctgccgtgggacccttctg
ccaggctgctgggtgatggccacctctcgtcctgggaaactgcctgcctgtgtgcccaca
gaggcagccatggtgtacatgtggggctttgatgggctgcgggtagagaagtatgtcagc
cacttcttcagtgatctgctgtctcgggagctggccctggcagaagtgagaagcaatgag
cgtctccggggtatgtgtgcagtacctgcactgtgcggagttgcctgcttctgcctccgc
cgtctgcttccaggaagccccccaggccaatctacggtcctgctgtccacggtaacccag
ctgtacctgcagatggtggagacttttaaccccaatgggactctgcctgccacatctttg
ttggaccttggaaaggtggcccttaagggactggacactgggaaggtcatcttctctatg
gcagacatccctcctcccctgatggcttttggagctgtccacggcctcctgacctccttc
tgtatccgtaccgatcctgagcaccaaaaaataggctatgcctttgcccacctaagcctt
caagagttctttgctgctctgtatctgatggccagtgacacagtggacaaagacacgctc
atctgctatgtcaccctcaattcccactgggtactgcggaccaaagctaggctggacctc
tccgacaatctccctaccttcctggcaggcttggcatcccacacttgccgtccattcctc
tgccacctggctcggcaggacgaagcctgggtgggctccaggcaggctgctgttgttcag
gtgctgaggaagttggctagccggaagcttacagggccaaagatgatagaattgtgtcac
tgtgtggctgagacccaggagctggagctggcgaggttcatggcccaaagcctccccttc
cgactttccttccacaatttcccactgacccgtgcagacctggctgcgctggccaatgtt
ctggaacacaaggcggcccccattcacctggattttgatggctgcccactggagccccac
tgcccagaggctctgatagggtgtgggcaggttgagaatctcagctttaaaagcagaaag
tgtggggacgcctttgcagaagccctgggcagaagcttgcctactctggggagtctgaag
accttagggttaacaggaagtaagatcacagcccaaggcatcagccacctggtacagact
ttgcccctctgttcccagctggaggaagtcagtttgcatgacaaccagctcaaggaccca
gaagtgctgagccttgcggagctgctcccttgcctgccaaagctccagaagcttgacctg
agcagaaacagcttctccatgtcaactctactgtccttggtgaaggtggccatcacgtgc
cctactgtcagaaagctgcaggtcagggaatcagacctcatcttccttctgtgcctggtc
acagagacagctgcacagccatcaggagcatcaaacctacaggacaaagatagcctgaag
aaagaaggacagaaccggagcctggaactcaggcttcagaagtgtcagctcagggtccat
gatgcagaaaccctcgtggagctattccagaaaggccccaggctggaggaagtggatctt
tcagggaaccatctggaagatgaaggctgtcgacttgtagcagaagctgcttcgcagctg
caaattgccaagaaactggacctcagtgacaatggcctctccaggacgggggtgacctat
gtgttgagagccatgagcacgtgtgggacgctggaagagatgcacatcagcctgctgagc
aacactgtggtactcacatttgcccaggagccaagggagcaggaaaggagctggaagagg
gatgcaccgcttaccagctttgtgtgtcctgtggcctctgagatgtcccagagctctcga
aggatcaggctgacacactgtggcttcctggccaagcacacagagaggctctgcagggca
ctgagcaccagctgccagctccaccgcctggatcaccttgacctgtcagacaactctctg
ggggacgaaggggtggcccaactagcccagctgctcccaggactgagtggtcccctgcag
tccctgaccctcagcaggaatggcgtgtccctggatgctgtgtttggcttaattccatgc
atgtcttctgttccgtgggtgttccacctagatgtcagccttgagagtgaccacatcctc
cttcgaggagctgggactgacagggatgcactagctggcagatgtggaccagggttcccg
gctggagccccggaactggagttcagtccgcgcttcagctccaggagcttccgccttcag
gggtgtcagctggaaccccggagccttgcctgcctctgtgcccctctggagaagtgccca
gggcctctggaagtccacttgtcctgcaagaccctgagtgatgagagcctgaagaccctg
ctagagtgcctgcccaagctgccccagctcagcctgctgcagctgaacaacaccgtcctg
tcttcaagaagccccttcctgctagctgacgtcttcaacctgtgcccacgggttcagaag
gtcaatctcaggtccctctgccatgctgacctgcactttggctccaaggaggagcaagag
ggtgtgtgctttgggtttccaggatgcagcctcggccaggagcacatggagccactgtgc
agtgctctgagcaggtgcacagtcctcagccagcttgacctcacaggcaacctgctgaac
gacagtgggctcaggtgccttctggaatgcctgccgcagctacccatctctggatggctt
gacctcggtcacaacagtatctctcaggaaggggtcctgtgcctgctggagaccctgcct
tcctgccctcgtgtctgtgagatctctgtgagtctgggctccgaacagagcttccggata
cgcatgtccaaagaggaagaagcctgggcaacgctgaggctctgtgagtgcagcttcagc
ccagaacacgtctccagactggcttccagcctgagccaggctcaacagctgtcagagctc
ttgctgaccaggtgccacttggacctgccacagctgatccacctcctgaatctggtgaat
cgaccagcaggattgctgggcctcaggttggaagaaccctgggtgggccatgtcagctta
ccagctgtgatggaagtctgtgcccaggcctcaggacgtctcactgagttaagcctctct
gagacccagcagcagttgaggctccagctggaatttcgtcaccaagaagacaaatctgag
gccatggcaaacaggttggctcactgtgacctggggaccgaccacagtcttcttatgaca
cagatgatggagacgtgtgccagactgcaacagctcagcttgtctcaggttaacttcagt
gatgatgacgacaccaggtccaggctgctgcagaacctcctgctgtctagctgtgagctc
aagagcttccggctgacctccagctgtgtcagcacagagagcctcacccacctggcatct
ggtctggggcactgccagcatctggaagagctggacttctctaacaaccatctctgtgag
gagaacatcgagctgctgatgggagcccttcaggggacctgcaggctaaagaagctacac
ctcggtcactttccactggaagcctcctctctggccttgctcattcaaggactaagtcat
atgaccttgctgcagcaccttagcttgaagcacaaccagattggagacgtgggtacccag
aacttggctgccatcttgccgaggcttccaggcctcaggaagttagacctgtcggggaac
agcattggcccagccgggggagtgccgctggcaaagtctctcacccactgcgggtgcttg
gaggagatcatactgggcaacaatgctctgggggaccccacagccctggggctggctcag
agattgcctccccaactgagggttctgtgtctgccatccagccatctgggtccagagggg
gccctgggcctggcccaggccctgaagcagtgcccacacatagaagagttcagcttggca
gagaataacttggctggaagggtcccatacttctgcaagagtctcccacggctcagaaaa
attgacctgatttcctgcaaaattgatgaccaagctgccaagcacctggccaccagcctc
atgttctgcccagccctggaagaaatcttgctgtcctggaacctccttggtgatgaggtg
gctgctgagctggcccaggtcctgccgcagatggggcagctgaagagagtggacttggag
aagaacaggatcacagcatgtggagcccagctcctggctcacgggctggtccagggctcc
tgtgttccagttattcgcctctggaacaaccccattcctgccgatgtggcccagagtcta
cagagccaggagcccaggctggacttcgccttctttgaccagcagccccgggctctctga
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integrated database retrieval system
