KEGG   Peromyscus leucopus (white-footed mouse): 114695105
Entry
114695105         CDS       T07241                                 
Symbol
Col4a1
Name
(RefSeq) collagen alpha-1(IV) chain isoform X1
  KO
K06237  collagen type IV alpha
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Pathway
pleu04151  PI3K-Akt signaling pathway
pleu04382  Cornified envelope formation
pleu04510  Focal adhesion
pleu04512  ECM-receptor interaction
pleu04518  Integrin signaling
pleu04820  Cytoskeleton in muscle cells
pleu04926  Relaxin signaling pathway
pleu04933  AGE-RAGE signaling pathway in diabetic complications
pleu04974  Protein digestion and absorption
pleu05146  Amoebiasis
pleu05165  Human papillomavirus infection
pleu05200  Pathways in cancer
pleu05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    114695105 (Col4a1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    114695105 (Col4a1)
   04518 Integrin signaling
    114695105 (Col4a1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    114695105 (Col4a1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    114695105 (Col4a1)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    114695105 (Col4a1)
  09154 Digestive system
   04974 Protein digestion and absorption
    114695105 (Col4a1)
  09158 Development and regeneration
   04382 Cornified envelope formation
    114695105 (Col4a1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    114695105 (Col4a1)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    114695105 (Col4a1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    114695105 (Col4a1)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    114695105 (Col4a1)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    114695105 (Col4a1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pleu04147]
    114695105 (Col4a1)
   00536 Glycosaminoglycan binding proteins [BR:pleu00536]
    114695105 (Col4a1)
Exosome [BR:pleu04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   114695105 (Col4a1)
Glycosaminoglycan binding proteins [BR:pleu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   114695105 (Col4a1)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 114695105
NCBI-ProteinID: XP_028728135
LinkDB
Position
17:complement(1149155..1267551)
AA seq 1669 aa
MGPRFSVWLLLLLVALLLHEERSRAAAKGDCGGSGCGKCDCHGVKGQKGERGFPGLQGVI
GFPGMQGPEGPHGPPGQKGDAGEPGLPGTKGTRGPPGVAGYPGNPGLPGIPGQDGPPGPP
GIPGCNGTKGERGPLGPPGLPGFSGNPGPPGLPGMKGDPGEILGFTHGIPLKGERGFPGI
PGMPGPPGVPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGSSFQGPKGDKGEQGVSGPP
GVPGQAQVKEKGDFAPTGEKGQKGEPGFQGAPGFGEKGEPGKPGPRGKPGKDGEKGEKGS
PGFPGDSGYPGLPGRQGPQGEKGEAGLPGPPGTVIGTMPLGEKGERGHPGTPGLRGEPGP
KGYPGIQGQPGPPGPSVPGQLGAPGFPGERGEKGDQGVPGVSLPGPSGRDGAPGPPGPPG
PPGQPGHTNGIVECQPGPPGDQGPPGTPGHPGLTGEVGEKGQKGEGCLACDTEGLRGPPG
PQGPPGEIGFPGQPGAKGDRGFPGRDGIEGLPGPQGAPGLMGQPGAKGEPGEVFFDMRLK
GDKGDPGFPGQPGMPGRAGTPGRDGHPGLPGPKGSPGLVGLKGERGPPGGVGFPGSRGDI
GPPGPPGIGSIGPIGEKGQPGFPGGPGSPGLPGPKGEAGKVVPLPGPPGAAGLPGPPGFQ
GPQGDRGFPGTPGRPGIPGEKGAEGQPGIGFPGPPGPKGVDGLPGDVGAPGSPGRPGFNG
LPGNPGPQGQKGEPGIGLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGEHGLVGPPGLQGI
RGDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGQGPPGSSGPPGIKGEKGFPGFPGLDMPG
PKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGLKGEMGVMGTPGQPGSPGPAGTPG
LPGEKGDHGLPGSSGPRGDPGFKGDKGDIGLPGMPGSMEHVDMGSMKGQKGDQGEKGQIG
PAGDKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGLSGTPGAPGLPGPKGSVGGMGMPG
SPGQKGVPGVPGQQGVPGLPGEKGAKGEKGQSGIPGIGIPGRPGDKGDQGLAGFPGSPGE
KGEKGSAGTPGMPGSPGPRGSPGSIGHPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGT
PGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGNKGDKGSKGEVGFPGLAGSP
GIPGAKGEQGFMGPPGPQGQPGLPGTPGHPVEGPKGDRGPQGQPGLPGHPGPMGPPGFPG
INGPKGEKGNPGWPGAPGIIGPKGDPGFQGMPGIGGAPGITGSKGDMGPPGVPGFQGQKG
LPGLQGVKGDQGDQGIPGPKGLQGPPGPPGPYDVIKGEPGLPGPEGPPGLKGLQGPPGPK
GQQGVTGSVGLPGPPGVPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTP
SVDHGFLVTRHSQTTDDPLCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM
PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPISGDNIRPFISRCAVCEAPAMVMAV
HSQTIQIPPCPNGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG
TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq 5010 nt   +upstreamnt  +downstreamnt
atggggccccggttcagcgtctggcttctcctgctgctcgtcgcccttttgctccacgag
gagcgcagccgggccgctgcgaagggtgattgtggcggctctggctgtggaaaatgtgac
tgtcatggcgtgaagggacagaagggagaaagaggatttccagggttacaaggtgtcatt
gggtttcctggaatgcaaggacctgagggaccgcatggaccaccaggacaaaagggtgat
gctggagaacctgggcttcctggcaccaaagggacaagaggacctcctggagtagctggt
taccctgggaaccctggacttcctggtattcctggccaagatggtcctccaggtcctcca
ggtatcccaggatgcaacggtacaaagggagagagagggccgctcggtcctcccggcttg
cctggattcagcgggaatcctgggccaccggggttaccaggaatgaagggagaccctggt
gaaattctcggcttcacccatggaataccgttgaaaggggaacgaggattccctggtatc
cctgggatgccgggcccaccaggagtaccaggactccagggacctgttggtcctccagga
tttactggaccaccgggtcccccaggccctcctggccctcccggagaaaagggacagatg
ggctccagcttccaaggaccaaaaggtgacaagggcgagcagggggtcagcggcccccct
ggagtacccggacaggcacaagttaaggaaaaaggagactttgccccaactggagaaaag
ggtcagaaaggtgaacctggattccagggagcaccagggtttggtgagaaaggtgaaccc
gggaagccagggcctcggggaaagcctggaaaagatggcgagaaaggagaaaaggggagc
ccgggctttcctggtgattccgggtacccaggactcccaggacggcagggccctcaggga
gagaagggtgaagctggacttccgggcccccctggaacggtgattggcaccatgccgctg
ggagagaaaggagagcgaggccaccccggaacaccagggttaagaggagagccaggccct
aaaggttaccctggaattcaaggccagccaggccctccaggcccctccgttccaggccag
cttggtgctcctggcttcccaggcgaaagaggagaaaaaggtgaccagggagtcccaggt
gtgtctttaccaggaccaagtggaagagatggagccccagggcctcctggcccccctgga
ccccctggacagccaggccacacaaatggcattgtggagtgtcagcctggaccacctgga
gaccagggtcctcccgggactccaggacaccctgggttgacaggtgaagttggggagaaa
ggtcagaaaggagaaggctgccttgcttgtgacacagaaggccttcgaggccctcctggg
ccccaggggcccccaggagagattggtttccccggacagccaggggccaaaggtgaccga
ggcttccctggcagggatggcattgaaggactaccgggtccgcaaggtgcaccagggctc
atgggccagcctggagctaagggagagcctggcgaggtattttttgacatgagactcaaa
ggtgacaaaggagatccaggttttccaggacagccaggcatgccgggaagagcaggaacc
cctggaagagatggccacccaggacttcctggacccaaaggctccccgggtttggtagga
ttgaaaggagagcgaggtccccccggaggagttggcttccccggcagtcgtggtgacatt
ggcccacctggacccccaggaatcggttccattggtcctattggtgaaaaaggacaacca
ggctttcctggaggccctgggtccccaggtcttccaggtccaaagggcgaagcaggaaag
gtcgtcccacttcctggcccccctggagctgcaggcctcccgggaccccctgggttccaa
gggccgcaaggtgaccgaggcttcccaggaaccccaggacggccaggcatcccgggagaa
aagggtgctgagggtcagccagggattggatttcccgggcccccgggccccaaaggtgtg
gacggcttgcccggagacgtgggagcgcctgggagccccggccgccctggatttaatggc
ttacccggcaacccaggaccacaaggccaaaagggagaacctggcattgggctaccagga
ctcaaaggccagcctggccttccaggcattcctggcacacctggagagaagggcagcatc
gggggaccaggcgttcctggagagcatggattggttggccccccgggactccaggggatc
agaggtgacccgggacctcccggagttcaaggccctgcaggtccaccaggggttccagga
ataggaccacccggagccatgggccctcccggagggcagggaccaccagggtcatcaggc
ccacctggaatcaaaggagagaaggggttccctggattcccaggactggacatgcccggc
cccaaaggagataaaggctctcaaggacttcctggcctcacaggacagtcaggcctccct
ggccttcccggacagcaggggactcctggagttccagggttcccaggtttgaaaggcgaa
atgggcgtcatgggaaccccagggcaaccaggctcaccaggaccagcaggcaccccaggg
ttacctggagaaaaaggggaccatggccttccgggctcctcaggacccaggggagaccct
ggctttaaaggtgacaagggggacattgggcttcctggcatgccagggtctatggaacac
gtggacatgggcagcatgaagggacagaaaggagaccaaggagagaaaggacaaattgga
cccgctggtgataaaggttcccgaggagaccctggaacgccaggagtgcctgggaaggat
gggcaggcagggcaacctggacagccaggacctaaaggtgacccaggtcttagtggaaca
ccaggagcccctggactccctggacccaaaggatcagttggaggaatgggcatgccaggt
tcacctggacagaaaggtgtgccaggcgtccccggccaacagggtgtccccggcttacct
ggagagaagggggcaaagggagagaaaggacagtcgggtatacctggcatcggaatcccc
gggcggcctggtgacaagggagaccaagggctcgctggcttcccaggcagccctggcgaa
aagggagagaaaggcagcgccggaaccccagggatgccagggtccccaggcccaaggggg
tctccagggagcatcggccatccaggaagcccaggcctgcctggagaaaagggagacaaa
ggcctcccaggactggatggcattcccggtgtcaaaggagaagcaggtcttcctgggact
cccggccccaccggcccagctggccagaagggagagcctggcagtgatggaatcccgggg
tcagcaggagagaagggagaaccaggtcttccaggaagaggcttcccaggcttcccaggg
aacaaaggagacaaaggttccaagggtgaagtgggcttccctggcttagctgggagtcca
ggaattcccggagccaagggcgagcaaggattcatgggtcctccgggccctcaaggacaa
cccggcttacctggcactcccggtcaccctgtggaggggcctaaaggagaccgaggacct
cagggtcaacccggcctgccagggcatccgggacctatggggcctccagggttccctgga
atcaatgggccgaaaggtgaaaagggaaatccaggttggccaggagctcctgggattata
ggccctaagggagacccaggatttcaaggcatgccgggcattggcggagctccagggatc
acaggttcaaagggagatatgggacccccaggagttccaggattccaaggtcagaaaggt
cttcctggcctacagggagtgaaaggagaccagggagatcaaggcatacccggccccaaa
ggtctccaaggtcccccagggcccccaggtccatatgatgtcatcaaaggagaaccaggg
ctccctggtccagagggtccccctggtctaaaagggctccaaggaccaccagggccaaaa
ggacagcaaggtgtgacaggctcagtgggcttgcccggacccccaggtgtccctgggttt
gatggcgcccctggccagaaaggagagactggaccctttggaccacctggtccgagaggg
tttcctggtccaccaggccctgatgggctgccgggatccatgggtcccccaggtacccca
tctgtggaccatggcttccttgtgaccaggcatagtcagacaacagatgatccactgtgt
cctccagggaccaaaattctttaccatgggtactctctgctctatgtgcagggcaacgag
cgggcccacgggcaggacttgggcacggccggcagctgtctgcgcaagttcagcacgatg
cctttcctcttctgcaacatcaacaacgtctgcaacttcgcctccaggaacgactactct
tactggctgtccacgccagagcccatgcccatgtccatggcgcccatctctggggacaac
atccggcccttcattagcaggtgtgcagtgtgcgaggcaccggccatggtgatggcggtg
cacagtcagaccattcagatcccgccgtgccccaacggttggtcctcactgtggattggc
tactccttcgtgatgcataccagcgctggtgctgaaggttctggccaagcccttgcatcc
cctgggtcctgtctggaagagttcagaagcgctccattcattgagtgccatggccgagga
acatgcaattactatgcaaatgcttacagcttttggctcgccaccatagagagaagcgag
atgttcaagaagcccacgccgtccaccttgaaggcaggggagcttcgcactcacgtcagt
cgctgccaagtgtgcatgagaagaacctaa

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