Peromyscus leucopus (white-footed mouse): 114695346
Help
Entry
114695346 CDS
T07241
Symbol
Usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pleu01002
]
114695346 (Usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pleu04121
]
114695346 (Usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pleu04147
]
114695346 (Usp13)
Enzymes [BR:
pleu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
114695346 (Usp13)
Peptidases and inhibitors [BR:
pleu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
114695346 (Usp13)
Ubiquitin system [BR:
pleu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
114695346 (Usp13)
Exosome [BR:
pleu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114695346 (Usp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_9
UBA_4
Motif
Other DBs
NCBI-GeneID:
114695346
NCBI-ProteinID:
XP_028728496
LinkDB
All DBs
Position
6:12909643..13033352
Genome browser
AA seq
858 aa
AA seq
DB search
MQRRGALFSVPGGGRKMASGDLGELLVPHMPTIRVPRSGDRVYKNECAFSYDSPNSEGGL
YVCMNTFLAFGREHVERHFRKTGQSVYMHLKRHMREKVRAASAGALPKRRNSKLFLDLDL
DDDLNSDDYEYEDEAKLVIFPDHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDSDSW
ENELPVSKYASNLAQLDNGVRIPPSGWKCARCDLRENLWLNLTDGSVLCGKWFFDSSGGN
GHALEHYRDMGYPLAVKLGTITPDGADVYSFQEEGPVLDPHLAKHLAHFGIDMLHANRTE
NGLRDNDIKPRVSEWEVIQESGTKLKPMYGPGYTGLKNLGNSCYLSSVMQAIFSIPEFQR
AYVGNLPRIFDYSPLDPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQQN
GISPRMFKAFVSKSHPEFSSNRQQDAQEFFLHLVNLVERNRIGSENPSDVFRFLVEERIQ
CCQTRKVRYTERVDYLMQLPVAMEAATNKDELIAYELMRREAEANRRPLPELVRAKIPFS
ACLQAFAEPDNVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPRKFDVS
IDMPDLLDISHLRARGLQPGEEELPDISPPIVIPDDSKDRLMNQLIDPSDIDESSVMQLA
EMGFPLEACRKAVYFTGNTGAEVAFNWIIVHMEEPDFAEPLTIPGYGGAGASVFGATGLD
NQPPEESVAIITSMGFQRNQAVQALRATNHNLERALDWIFSHPEFEEDSDFVIEMENNAN
ANIMSEAKPEGPRVKDGSGMYELFAFISHMGTSTMSGHYVCHIKKEGRWVIYNDHRVCAS
ERPPKDLGYMYFYRRIPS
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccggggcgccctgtttagcgtgccgggcggcggcaggaagatggcttcaggg
gacctgggcgagctactggtgccgcacatgcccacgatccgcgtgcccaggtcgggggac
cgcgtctacaagaacgagtgcgccttctcctacgactccccgaactctgaaggtggactc
tatgtatgcatgaatacatttttggcctttggaagggaacacgttgaaaggcattttcga
aaaactggacagagtgtgtacatgcacctgaaaaggcacatgcgagagaaggtaagagca
gcatcagccggagccttacccaaaaggaggaattccaagttatttttagatctagatttg
gatgacgatttaaatagtgatgattatgaatatgaagacgaagccaaacttgttatattc
ccagaccattatgaaatagcccttccaaacatcgaggagttgccagccctggtaacaatt
gcatgtgatgcagtgctgagctcaaagtcgccttataggaagcaggattcagactcgtgg
gagaatgaactgccagtatcaaagtatgctagcaatctggcccagctggacaacggggtc
cggattcctcccagcggctggaagtgtgcccggtgcgacctgcgggagaacctctggctg
aatctgactgacggctctgttctgtgtgggaagtggttttttgacagctcagggggcaat
ggccatgcactggagcattatagagacatgggctatcctctggccgtgaagctgggcacc
atcacacccgatggggcagatgtttattcttttcaagaagagggacctgttttggatcct
catttggccaaacacttagcccacttcgggatcgacatgcttcatgcgaacaggacagag
aatgggctccgggacaatgacatcaagccaagagtcagcgagtgggaagtgatccaagag
tcagggactaagctgaagccgatgtatggaccagggtacacgggcctgaagaacctgggg
aacagctgctacctcagctctgtcatgcaggccatcttcagcatccccgagttccagaga
gcgtacgtaggaaacctcccaaggatatttgactactcgccattagatccaacccaggac
ttcaacacccagatgactaagttggggcatggtctcctctctggccagtactcgaagcct
cccgtgaaatccgagctcattgagcaggtcatgaaggaggaacacaagcctcagcagaac
gggatctctccacgcatgttcaaggcctttgtcagcaagagccacccagaattctcctct
aacagacagcaagatgcccaggagtttttcttgcacttggtcaatctggtggagaggaat
cgaattggctcagaaaacccaagtgatgtcttccggtttctggtggaggaacgcattcag
tgctgtcagacccgaaaggtccgctacacagagcgggtggactatctgatgcagctacct
gtggccatggaggcagcaaccaacaaagatgagctgatcgcctatgaactgatgagaagg
gaagcagaagcaaaccgaagacctcttcccgagctggtgcgagccaagatcccattcagt
gcctgccttcaggcctttgctgaaccagacaatgtggatgacttctggagcagtgccctg
caggccaagtctgcgggagtgaaaacatctcgctttgcctcattccccgaatacttggta
gtgcagataaagaagttcacttttggtcttgactgggttcccagaaaatttgatgtttct
attgatatgccagacctcctagatatcagccatctcagagccaggggcttacagccagga
gaagaggaactgccagacatcagtccccctatagtcattcctgatgactccaaagatcgc
ctgatgaaccagttgatagacccctcagacatcgatgaatcctccgtcatgcagctggcc
gagatgggcttccctttggaagcctgccggaaggctgtgtacttcaccgggaacactgga
gctgaggtggccttcaactggattatcgtgcacatggaggaacctgattttgctgaacca
ctgaccatacctgggtatggaggggctggagcctctgtctttggtgctactggactggac
aaccaacctcccgaggaaagcgtagccatcatcacctccatgggatttcagcgcaatcag
gcagtgcaggccttacgggcaacgaatcataacctggaaagggcgctggactggatcttc
agccacccggagtttgaagaggacagcgactttgtgattgagatggagaacaacgccaat
gcaaacatcatgtctgaggccaagcctgaagggccccgagtcaaggatggatctggaatg
tacgagttatttgcattcatcagtcacatggggacatctacaatgagtggccattatgtt
tgccatatcaaaaaggagggacgatgggtgatctacaatgaccacagagtctgtgcctcg
gaaaggccccctaaagacctgggatatatgtacttttaccgtaggataccaagctaa
DBGET
integrated database retrieval system
