Peromyscus leucopus (white-footed mouse): 114695541
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Entry
114695541 CDS
T07241
Symbol
Ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04612
Antigen processing and presentation
pleu05145
Toxoplasmosis
pleu05152
Tuberculosis
pleu05164
Influenza A
pleu05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
114695541 (Ciita)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
114695541 (Ciita)
09171 Infectious disease: bacterial
05152 Tuberculosis
114695541 (Ciita)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
114695541 (Ciita)
09163 Immune disease
05340 Primary immunodeficiency
114695541 (Ciita)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pleu01001
]
114695541 (Ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pleu04054
]
114695541 (Ciita)
Enzymes [BR:
pleu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
114695541 (Ciita)
Protein kinases [BR:
pleu01001
]
Serine/threonine kinases: Other
TAF1 family
114695541 (Ciita)
Pattern recognition receptors [BR:
pleu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
114695541 (Ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_14
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
114695541
NCBI-ProteinID:
XP_037057547
LinkDB
All DBs
Position
8b:25568696..25620843
Genome browser
AA seq
1201 aa
AA seq
DB search
MNHFQAILAQVRTLLSSQQPRQVQALLDGLLEEELLSREYHCALLREPDDEALARKISLT
LLEKGDLDLACSSWICSRLQAPVVERGSSYRDHGGHSLRATMELGLPEGSYLELLNSDAD
PLHLYHFYDQMDLAGEEEIELNSEPDTDTINCDQFSKLLQDMEGDEETREAYANIAELDQ
YVFQDTQLEGLSKDLFIEHIGAEEAFSESMEVPVEAGPRPQKRRSSEEHSMDPKHRKLAV
PSVVPMLTGSFLMGPASLSTKPYLPPALPNQEPVPSHAYLEGAAQTSVPTSMSSLNCLDL
PIGHLQLLPTLPQGLWQISGADTGLPSVLIYHGEMPQVNQDASGSPTVPSLPKSPDRLGS
ISPFAPSAADLPSMPEPALTSRAHEMEDTTSPSPCQEDPESSIKLPKWPESVERFQNSLK
DKYQVEPESLSGPLVATELVRARLERGSNKSQERELATPDWTERQLVHGGLAEVLQAAGA
RRRPRETQVVAVLGKAGQGKSHWARMVSQAWAHGQLPQYDFVFYVPCHCLDRPGDTYHLQ
DLLCPPSLQPLVMDDEVLGHIVRQPERVLLILDAFEELEAQDGLLHGPCGPLPPEPCSFR
GLLAGLFQRKLLRGCTLLLTARPRGRLAQSLSKADAIFEVPSFSTEQAQTYMRHYFENSE
TAGDQDKALGLLEGQPFLLTHSHSPALCRAVCQLSKALLEQGTETQLPCTLTGLYVGLLG
PAARDSPPGALVELAKLAWELGRRHQSTLQETQLLSVEVRTWAVTHGLVQPTPGTTEAQL
GFSSFLFQCFLGAVWLAQCNDIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLVFQPR
GHCLGALMEPAVADRKRKVLTRYLKRLKLGTLRAGRLLELLHCAHETQDPGIWEHVARQL
PGHLSFLGTRLTPPDVHMLGRALETASQDFSLDLRQTGIEPSGLGDLVGLSCVTSFRAAL
SDTMVLWESLRQQGEPQLLQVAEEKFTIEPFKAKSPKDVEDLDSLVQTRRLRNPSEDAAP
DLPAIRDLKKLEFALGPVLGPQAFPTLAKILPAFSSLQHLDLDSLSENKIGDEGVSKLSA
TFPQLKVLETLNLSQNSITDVGACKLAEALPALAKSLLRLSLYNNCICDAGAKSLAQVLP
DMVSLRVMDVQFNKFTAAGAQRLASSLQKCPQVETLAMWTPTIPFGVQEHLQQLDARISL
R
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacttccaggccattctggctcaggtgcggacactgctctccagccagcagccc
aggcaggttcaggccctcctggatggcctgctggaagaagagctgctctcccgggagtac
cactgtgccctgctccgtgagcctgatgacgaggctctggcccgcaagatttccttgact
ctgctggagaaaggggatttagacttggcttgctcaagctggatctgcagcaggctccag
gccccggtggtagagaggggcagcagctacagggaccatggaggccatagtctgcgtgcc
accatggaactggggcttccagagggcagctacctggagctccttaacagtgatgccgac
cccctacacctttaccacttctatgaccagatggacctggccggggaggaggagatcgag
ctcaactcagagccggacacagacaccatcaactgtgaccagttcagcaagctgttgcag
gacatggagggggatgaagagacccgggaggcctatgccaacatcgcggaactggatcag
tacgtgttccaggacacccagttggagggcctcagcaaggacctcttcatagagcacatt
ggagcagaggaagccttcagtgagagcatggaggtccctgtagaagcaggaccgaggcct
cagaagagacgctcctcagaagagcactctatggacccaaagcacaggaagctagctgta
ccctctgttgtgcccatgctgactggcagcttcctgatggggccagcaagcctctccacc
aagccctacctaccacctgctctgcccaatcaagagccagtacccagccatgcatacctg
gagggagcagctcagacatccgtgcccacctctatgtcctcattgaactgtttggatctc
cccatcggacacctccagctccttcccaccctgccacaggggctctggcaaatatcaggg
gctgacacagggctccccagtgttctgatctaccatggtgagatgccccaggtcaatcaa
gatgcttcaggcagccccactgtccccagcctccccaaatccccagacaggctgggctcc
atcagcccctttgcaccgtctgcggctgacctacccagcatgcctgaacctgcgctgact
tcccgtgctcatgagatggaggacacaacatccccctccccatgccaagaggatcctgag
tcttccatcaagcttccaaaatggccagagtctgtggagcggttccagaactccctgaag
gacaagtaccaggtggagcccgagagcctgagcggtcccctggtagccacggagctggtg
cgggccaggttggagagaggcagcaacaagagccaggaaagggagctagccactccagac
tggacggagcgccagctagtccatggtggcctggctgaggtgcttcaggctgccggcgcc
cgccggcggccacgagagacacaggtggttgctgtgctgggcaaggctggccagggcaag
agccactgggctcggatggtgagtcaggcctgggcccatggccagttgccacaatatgac
tttgtcttctatgtcccttgtcactgcttggatcgtccgggggacacttaccacctgcag
gatctgctctgtcccccaagcctgcagccactggtcatggatgacgaggtcttaggtcac
attgtgaggcagccagagcgtgtcctgctcattctagatgcttttgaggagctagaggcc
caagatggcctcctacatggaccatgtggacctctgcccccagagccctgctccttccgg
gggctgctagctgggcttttccagcggaagctgctgcgtggctgtaccctgctcctcaca
gcccggcctcgggggcgcctggctcagagcctgagcaaggcagatgccatctttgaggtg
cccagcttctctactgagcaggcccagacgtacatgagacactactttgagaactcagag
acagcaggggaccaagacaaggccctgggcctcctggagggtcagccttttctcctcacc
catagtcacagccctgctctatgcagggctgtgtgccagctctccaaggccctgctggaa
cagggcacagagacccagctgccttgcacacttacaggactctacgtcggcttgctaggc
cctgcagccagagacagtcctccaggggccttagttgaactggccaagctggcctgggag
ctgggccgcagacaccaaagcaccttgcaagagacccagttactatcagtggaggtgagg
acctgggcagtgacccacggcttggtgcagcccaccccggggaccacagaggcccagctg
ggcttctccagttttctgttccagtgcttcctgggggctgtgtggctggcacagtgcaat
gacatcaaagacaaggagctgccacagtacctggccttgaccccaaggaagaagagaccc
tatgacaactggctggagggtgtaccacgctttctggctgggttggttttccagcctcga
ggccactgcctgggcgctctgatggagcctgcagtggcagacaggaaacggaaggttctc
acccggtacctgaagcgcctgaagctggggactctgcgggccgggcggctgctggagctg
ctgcattgtgctcatgagacacaggaccctgggatatgggagcatgtagcacgccagctc
cctgggcacctctccttcctgggcacccggctcacacccccagatgtgcacatgctgggc
agggccctagagacggccagccaggacttctccctggacctccgtcagaccggcattgag
ccctccggactgggggacctcgtgggactcagctgtgtcaccagtttcagggccgccttg
agtgacacaatggtgctctgggagtccctccggcagcagggagagccccagctactccag
gtggcagaggagaagttcaccattgagccatttaaggccaagtctccgaaggacgtggaa
gacctggacagcctcgtgcagacccgcaggctaagaaacccctcggaggatgcagctccg
gatcttcctgccatccgggaccttaagaagctagagtttgcgttgggtccggtcttgggt
ccccaggctttccccacactggcaaagatccttccagcgttctcatccctgcagcacctg
gacctggactcactcagtgagaacaagatcggggatgagggtgtgtcgaagctctcagcc
acctttcctcagctcaaggtcctggagacgctcaacctgtcccaaaacagcatcactgat
gtgggtgcctgcaagcttgcagaagccctgccggccctggccaagtccctcctaaggctg
agcttgtacaataactgcatctgtgacgcaggagccaagagcctggcacaagtgcttcca
gacatggtgtccctgcgggtgatggatgtccagtttaacaagttcacggctgccggtgcc
cagcggctggcctccagccttcagaagtgccctcaagtggaaacgctggcaatgtggaca
cccacaatcccctttggggttcaggaacacttgcagcagctggatgcccggatcagcctg
agatga
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integrated database retrieval system
