Peromyscus leucopus (white-footed mouse): 114695775
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Entry
114695775 CDS
T07241
Symbol
Ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pleu04990
]
114695775 (Ptchd1)
Domain-containing proteins not elsewhere classified [BR:
pleu04990
]
Other domain-containing proteins
Patched domain-containing proteins
114695775 (Ptchd1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
114695775
NCBI-ProteinID:
XP_028729039
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All DBs
Position
X:37848052..37903240
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AA seq
888 aa
AA seq
DB search
MLRQVLHRGLRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQH
SLAKIERNLVNSLFPVNRSKHRLYSDLQTPGRYGRVIVTSFQKANMLDQHHTDLILKLHT
AVTKIQVPRPGFNYTFAHICVLNNDKTCIVDDIVHVLEELKNARATNRTNFAITYPITHL
KDGRAVYNGHQLGGVTVHSKDRVKSAEAIQLTYYLQSINSLNDMVAERWESSFCDTVKLF
QKSNSKVKIYPYTSASLREDFQKTSRVSERYLVTSLILVVTMAILCCSMQDCVRSKPWLG
LLGLVTISLATLTAAGIINLTGGKYNSTFLGVPFVMLGHGLYGTFEMLSSWRKTREDQHV
KERTAEVYADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAILFNYLYVLSF
YGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKPAWYRFLLTARFSEDTAEGEEANTYES
HLLVCFLKRYYCDWITNTYVKPFVVLFYLIYISFALMGYLQVSEGSDLSNIVATATQTIE
YTTAQQKYFSNYSPVIGFYIYESIEYWNSSVQEDVLEYTKGFVRISWFESYLNYLRKLNV
STDLPKKNFTDMLRNSFLKAPQFSHFQEDIIFSKKYNDEVDVVASRMFLVAKTMETNREE
LYDLLETLRRLSVTSKVKFIVFNPSFVYMDRYASSLGAPLHNSCISALFLLFFSAFLVAD
SLINVWITLTVVSVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPLLSTFVLGKD
FTRTKWVKNALEVHGVAILQSYLCYIVGLFPLAAVPSNLTCTLFRCLFLIAFVTFFHCFA
ILPVILTFLPPSKKKRKEKKNPENREEIECVEMVDIDSTRVVDQITTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcaggttctgcacaggggcttgaggacgtgtttctcccggcttggccacttc
attgccagtcacccggtcttcttcgcttcggcgccggtgctcatctccatcctgctcggc
gccagcttcagccgctaccaggtcgaagagagcgtggagcacctgctggcgccccagcac
agcctagccaagatcgagcgcaacctagtcaacagcctcttcccggtcaaccgctccaag
caccggctctactcggacctgcagacccctgggcgctacggccgggtcatcgtcacctcc
ttccagaaagccaacatgctggaccagcatcacacggacctgatcttaaagttgcatact
gctgtaaccaagatccaggttccaaggcctggctttaactatacgtttgcccacatatgt
gtcctgaataatgataagacttgcattgtggatgacatagtacatgtcctggaagagcta
aagaatgctcgggccactaatcggaccaattttgctatcacatatccgatcactcactta
aaggatggaagggctgtctataacgggcaccaacttggaggtgtcactgtacacagcaag
gatcgggtgaaatctgcggaggccattcagctcacttactatctgcagtcaatcaacagt
ctcaatgacatggtagctgagaggtgggagtccagcttctgtgacactgtcaaactattc
cagaaatccaacagtaaagtcaaaatatacccgtacacatccgcatcgctgagggaagat
ttccagaagaccagccgtgtatcagaacgttacctggtcaccagcctgattctggtagtc
accatggccatcctctgctgctctatgcaggactgtgtccgcagcaaaccctggttaggc
ctacttggattggtgaccataagccttgccactctcactgcagctggaatcatcaatctt
actggtgggaaatacaattccaccttcctgggagtccctttcgtcatgctaggtcatgga
ttatatgggacttttgaaatgctatcctcgtggaggaaaactagagaggaccaacatgtt
aaagagcgaactgcagaagtctatgcagactccatgctctccttctctctcaccactgcc
atgtacttggtcacctttggcataggggccagccctttcacgaacattgaggcagccagg
attttctgctgcaattcctgtattgcaatcctcttcaactacctctatgtactctcattt
tatggttccagccttgtgttcactggctacatagaaaataattaccagcatagtatattc
tgtagaaaagttccaaagcctgaggtattgcaggagaagccagcatggtataggtttctt
ctgacagctagattcagtgaggacacagctgaaggtgaggaagcaaacacttatgagagt
cacctattggtatgtttcctcaagcgctattactgtgactggataaccaacacctatgtc
aagccttttgtagtcctcttttaccttatttatatttcctttgccttaatgggctatctg
caggtcagtgaagggtcagaccttagtaacatcgtagcaactgcaacacaaaccattgag
tacactactgcccagcaaaagtactttagcaactacagtcctgttattgggttttacata
tatgagtccatagaatattggaactctagcgtccaagaagatgttctagagtacactaag
gggtttgtgcggatatcctggtttgaaagctatttaaattatcttcggaaactcaatgta
tccactgacttgcctaagaaaaatttcacagacatgttaaggaattctttcctgaaagct
cctcaattttcacattttcaagaggacatcatcttctctaaaaagtacaatgatgaggtt
gatgtagtggcctctagaatgtttttggtggccaagaccatggaaacaaacagagaagaa
ctctatgatctcttggagaccctgaggaggctttcagtcacctccaaggtgaagttcatt
gtctttaatccgtcttttgtgtacatggatcgatatgcctcctctctgggagcccccctg
cacaactcctgcatcagtgctttgttcctgctcttcttctcggcattcctggtggcagat
tcactgattaatgtctggatcactctaacagttgtatctgtggagtttggagtgataggc
ttcatgacattatggaaggtcgaactggactgcatttctgtgctatgcttaatctatgga
attaactacacaattgacaattgtgctccactgttatccacattcgttctgggaaaggat
tttacgagaactaaatgggtaaaaaatgccctggaagtgcatggggtagctattttacag
agttacctctgttatattgttggtctatttcctcttgcagctgtgccttcaaatctgacc
tgtacactgttcaggtgcttgtttttaatagcatttgtcaccttctttcactgctttgcc
attttacctgtgatactgactttcctgccaccctctaagaaaaaaaggaaagagaagaaa
aatcctgaaaaccgggaggaaattgagtgtgtcgaaatggtggatattgatagtacccga
gtagttgaccagattaccacagtgtga
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