Peromyscus leucopus (white-footed mouse): 114695893
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Entry
114695893 CDS
T07241
Symbol
Pcdh18
Name
(RefSeq) protocadherin-18 isoform X1
KO
K16499
protocadherin delta 2
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pleu04515
]
114695893 (Pcdh18)
Cell adhesion molecules [BR:
pleu04515
]
Cadherins
Protocadherins
114695893 (Pcdh18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
BBS1
TMEM154
Syndecan
Cadherin_C_2
PAH
Motif
Other DBs
NCBI-GeneID:
114695893
NCBI-ProteinID:
XP_028729220
LinkDB
All DBs
Position
6:complement(29413469..29427221)
Genome browser
AA seq
1135 aa
AA seq
DB search
MHQMNTKMHFRFALALLMAFFSHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLPN
PSAVRFRAMPRGNSPLLVVNENTGEISIGAKIDREQLCQKNLNCSIEFDVLTLPTEHLQL
FHIEVDVLDINDNSPQFSRPVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAND
FFSIEVRTRTDGAKYAELIVVRELDRELKASYELQLTASDMGVPQRSGSSILKISISDSN
DNSPVFEQPSYTIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIIETFKID
SERGHLTLFKPVDYEVTKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLMS
PGKEEISYVFEGDPIDTFVAIVRVQDKDSGLNGEIICRLHGHGHFKLQKTYENNYLILTN
ATLDREKRSEYSLTVIAEDKGTPSLSSVKHFTVQINDINDNPPRFQRSRYEFVISENNSP
GAYITTVTATDPDLGENGHVTYTILESFVLGSSITTYVTIDPSNGAIYALRIFDHEEVSQ
ITFVVEARDGGSQKQLVSNTTVVLTIIDENDNIPVVIGPAMHNNTAEISIPKGAESGFHV
TRIRAVDRDSGANAELSCSIVAGNEENIFIMDPRSCDIHTNVSMESIPSTEWALSVIIQD
KGNPPLHTKVLLKCMIFDYAESVTSTAMTSVSHASLDVSMIIIISLGAICAVLLVIMVLF
ATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSPS
SSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLHQ
GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG
FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ
QLSHQGLDDDSQPAESGEKKKSFSTFGKDSPSDEDSGDSSTSSLLSEMSSVFQRLLPASL
DTFSECNEVDRSNSLERRKGPAQAKTGSYPQGVAAWAASTHFQNPTSSSGTPLGTHSSVQ
PSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaaatgaatactaaaatgcactttagattcgcacttgcacttctgatggcgttt
ttcagccacgatgtcctgggtaagaatctgaaatacaggatttatgaggagcagagggtc
gggtcggtaatcgctagactatcagaagatgtggctgacgttttattgaagctgccgaac
ccttctgctgttcgttttcgagccatgccaagggggaattctcctctcctggtggtaaat
gagaataccggggaaatcagcatcggggctaaaattgaccgcgagcaactatgccagaaa
aacttaaactgttctatagagtttgatgtgctcactctgccgaccgagcatttgcagctg
ttccatattgaagtggacgtgctggacattaatgacaattccccccaattctcaagaccc
gtcattcccattgagatatcggagagtgcggcggtcgggactcgcatcccgctggacagt
gcgttcgatccagatgttggggaaaattccctccacacctactcgctctctgccaatgat
tttttcagtattgaagtgcggaccaggacagacggggccaagtacgctgaactcatagtg
gtgagggagttggatcgcgagctgaaggcgagctacgaacttcagctcacggcctccgac
atgggagtgccccagaggtctggctcctccattctgaaaataagcatttcggattccaat
gacaacagccctgtctttgagcagccctcttacacaatacaactcttagaaaactcccca
gttggaaccttgctcctggatctaaatgccaccgatccagatgagggcgctaatgggaaa
attgtgtattctttcagcagtcatgtgtctcccaaaattatagagacttttaagattgac
tcagaaagaggacatttgactcttttcaagccagtggattatgaagtcaccaagtcctat
gagattgatgtccaagcgcaagatttgggtcccaattccattcctgctcattgcaaaatt
ataattaaggttgtggatgtcaatgataataagcctgaaattagcataaacctcatgtca
cctggaaaagaagaaatatcttatgtttttgaaggggatcccattgatacatttgttgct
atcgtcagggttcaagacaaggattctgggctgaatggagaaataatctgtaggcttcat
gggcatgggcattttaaacttcagaagacatatgaaaacaactacttaatcttgaccaat
gccacgctggatagagaaaagagatctgagtatagtttgactgtgattgctgaggacaag
gggacacccagcctctcttcagtaaaacattttactgttcaaatcaatgacatcaatgac
aatccacctcgcttccagaggagccgatatgaatttgtcatctccgagaataactctcca
ggggcatatatcaccacagtgacagccacagatccagatcttggtgaaaatggacatgtg
acatacaccattttggagagttttgtcttgggaagttccattaccacgtatgtaaccatt
gacccatcgaatggcgccatctatgccctcaggatctttgaccatgaagaagtgagtcag
atcacttttgtggtggaggcaagggatggagggagtcagaagcagcttgtaagcaacacc
acagttgttctgaccatcatcgacgagaatgacaacatccctgtggttatagggcctgca
atgcacaataatactgcagagatctccatccccaagggagctgaaagtggcttccatgtc
acaagaataagggcagttgacagagactctggtgcaaatgctgaactcagctgctccata
gtagcagggaatgaggagaacatcttcatcatggaccccaggtcatgtgatattcacacc
aatgtcagcatggaatccattccctccactgaatgggcactctcagttatcatccaggac
aaaggcaaccctcctctgcacaccaaagtccttctgaagtgcatgatctttgactatgca
gaatctgtgacaagcacagccatgacctctgtgagccatgcatccttggatgtgtccatg
atcataattatttccttaggagcaatttgtgcagtgttattggttattatggtactcttt
gcaacgaggtgtaatcgagaaaagaaagacaccagatcctacaactgcagggtggcagaa
tccacttaccagcatcaccccaaaaggccatccaggcagattcacaaaggagacattaca
ctggtgcccaccatcaacggcacactgcccatcagatctcatcacagatcctctccatct
tcatctccaaccttggaaaggggacaaatgggcagccgccagagtcacaacagtcaccag
tcactcaacagtttggtgaccatctcatcaaaccacgtgccagagaatttctcattagaa
ctcacccacgccactcctgctgttgagcaggtctcccagcttctctccatgcttcatcag
gggcagtatcagccaaggccaagttttcgaggaaacaaatattccaggagctatagatat
gcccttcaagacatggataagtttagcttgaaagacagtggccgtggggacagtgaagca
ggagacagtgactacgatttggggcgagattctccaattgataggctgctgggcgaagga
ttcagtgacctcttcctcacagatggaagaattccagcagcaatgaggctgtgcacagag
gagtgcagagtcctgggccactctgaccagtgctggatgccgccgctgccctcaccatcc
tctgactacagaagcaatatgttcatccccggagaagaatttccagctcagcctcagcag
cagctctcacatcagggcctcgatgatgacagccagcctgcagaatctggggagaaaaaa
aagagcttttccacctttgggaaggactcccccagtgacgaggattcgggggattccagc
acatcatctctgctctcagaaatgagcagtgtgttccagcgcctcctccctgcatctcta
gataccttttctgaatgcaatgaagtggaccggtccaactccctggaacgtcggaagggt
ccagcgcaggccaaaactgggagctacccacaaggggttgcggcctgggcagccagcaca
cattttcagaaccccaccagcagctctgggacccctctggggactcactccagcgtgcag
ccttcttccaagtggctgccagccatggaggagatccctgaaaactatgaggaagatgat
tttgacaatgtgctcaaccatcttagtgatgggaaacacgaactcatggatgccagcgag
ctggtggctgagatcaacaaactgcttcaagacgtccgccagagctag
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