Peromyscus leucopus (white-footed mouse): 114696040
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Entry
114696040 CDS
T07241
Symbol
Samd4a
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114696040 (Samd4a)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
114696040 (Samd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
114696040
NCBI-ProteinID:
XP_028729415
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All DBs
Position
9:complement(76588722..76806280)
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AA seq
716 aa
AA seq
DB search
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSQTQARFLQLCLEHSLADCAELHVLEG
EANSPGIINQWQQESKDKVISLLLTHLPLLKPGNLDAKAEYMKLLPKILAHSIEHNQHIE
ESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSTSFGSQNRGRSDSVDYGQTHYYHQR
QNSDDKLNGWQNSRDSGICINASSWQDKSLGCENGHVPLYSSSSVPTTINTIGTSTSTIL
SGQAHHSPLKRSVSLTPPMNVPNQPLGHGWMSHEDLRARGPQCLPSDHAPLSPQSSVASS
GSGGSEHLEDQTTARNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQL
EAQNVTKGARHKIVISIQKLKERQNLLKSLERDIIEGGSLRIPLQELHQMILTPIKAYSS
PSTTPEARRHEPSLMGPENPGTDRKESATVANSVTASASAAAAGASGGLQPPQLSPCDGE
LAVAPLPEGDLPGQFTRVMGKVCTQLLVSRPDEENISSYLQLLDKCLVHEAFTETQKKRL
LSWKQQVQKLFRSFPRKTLLDISGYRQQRNRGFGQSNSLPTASSVGGGMGRRNPRQYQIA
SRNVPSARLGLLGTSGFVSSNQRHTAANPTIMKQGRQNLWFANPGGSNSMPSRTHSSVQK
TRSLPVHTSPQNMLMFQQPEFQLPVTEPDINNRLESLCLSMTEHALGDGVDRTSTI
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgcgaccaggtcggggtgctggcgggctggtttaagggctggaacgagtgc
gagcagactgttgcgctgctgtcgctgctcaagcgcgtgagccagacccaggcccgcttc
ctccagctctgcctggagcactcgctggccgactgcgccgagctgcacgtcctggaagga
gaggccaacagcccgggaatcattaaccaatggcaacaggaatccaaggataaagtgatt
tcccttctgttaactcacctgcctttgctgaagccaggaaacctcgacgcaaaagcagag
tatatgaaactgctgcccaagatcctggcgcactctatcgaacacaaccagcacatcgag
gagagcaggcagctgctgtcctacgctctgatccacccggccacttccctagaagaccgt
agtgctctagccatgtggctgaatcatttggaggaccgtacatcgaccagctttggcagc
cagaaccgaggccgctcggactctgtggattatggacagacgcactactatcaccaaaga
cagaactcggacgacaagctcaatggatggcagaactctcgggattctgggatttgcatc
aacgcctccagctggcaggacaaaagcctggggtgtgagaatggccacgtgcccctctac
tcttcctcatctgtccccaccacaatcaacacgattggaaccagcacaagtacgattctc
tcaggccaggcacaccacagccctttgaaacgatctgtatcccttaccccacccatgaat
gtgccaaaccagcctctaggacatggatggatgtctcatgaggacttacgagctagagga
ccccagtgcctcccatccgatcatgcccccctgtctccacaaagcagtgtagcctcttca
ggaagtggtgggagtgaacacttagaagatcagaccactgctcgtaacacattccaagaa
gaaggtagtggtatgaaagatgttccagcttggttaaaaagtctccgcctgcacaaatac
gctgcgctgttctcacagatgacctatgaggagatgatggccctcaccgagtgtcaactg
gaggctcagaatgttaccaaaggtgcaagacacaaaattgtcatcagtattcagaagctc
aaagaaagacaaaatctcctgaagtctttggaaagggacatcatcgaagggggcagcctg
cgcatccccctccaggagctgcatcagatgatcctgacgcccatcaaggcctacagctct
cccagtaccactccggaggcgcgccgccatgagccttccctgatgggcccggagaaccct
ggcaccgaccgcaaagagagtgccacggtggccaacagcgtcacagccagtgcctccgcc
gccgcggccggcgccagcggtggcctgcaaccaccccagctgagcccctgcgatggggaa
ctggctgtcgcccctctgcccgagggagacctccccgggcagttcacacgcgtcatgggg
aaagtgtgcacacagctcttggtctccagacctgacgaggaaaatataagttcctatctc
cagctcttagacaagtgcctcgttcatgaggcatttacagagacacagaaaaaaagactg
ttgtcatggaaacagcaggtgcagaagctctttcggtctttccctcggaaaacccttcta
gacatatcaggatatcgacagcaaagaaatcgtggctttgggcagtccaactccctcccg
acagccagctcagtgggcggcggcatgggcagacggaacccacgacagtaccagattgcc
tctcggaatgtcccttctgctcgccttggtctcttgggcaccagcggattcgtcagctct
aaccagcgccacaccgctgccaaccccaccatcatgaaacaaggaagacagaacctctgg
tttgccaaccccgggggcagtaacagcatgcccagccgtacccacagctccgtccagaag
acccgctcgctgcccgtgcatacttccccacaaaacatgctgatgttccagcaaccagaa
ttccagcttcctgtgactgaacctgacatcaacaacaggctggagtccctgtgcctcagt
atgacggagcatgccctgggagatggggttgaccggacctccacaatctag
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