KEGG   Peromyscus leucopus (white-footed mouse): 114696277
Entry
114696277         CDS       T07241                                 
Symbol
Wdr43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Pathway
pleu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    114696277 (Wdr43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pleu03009]
    114696277 (Wdr43)
Ribosome biogenesis [BR:pleu03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    114696277 (Wdr43)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_IFT122_1st Utp12 WD40 Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 WD40_Gbeta Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR36-Utp21_1st WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st EIF3I Beta-prop_Aladin Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_VPS8 Beta-prop_ACSF4 UTP15_C Beta-prop_Vps41 Beta-prop_WDR35_TULP_N WD40_like NBCH_WD40 Tricorn_2nd Beta-prop_IFT140_1st Beta-prop_WDR41 Zip
Other DBs
NCBI-GeneID: 114696277
NCBI-ProteinID: XP_028729727
LinkDB
Position
22:complement(33601638..33645067)
AA seq 682 aa
MAAGGGGSYDPLAPAGVPCAFSPDGQAYFALASGDGHLRVWETASNRLHQEYVPSAHLSG
TCTCLAWAPARLQAKESHQRKKRKSEVIGSSDQVDLLALGTAVGSILLYSTVKGELHSKL
ISGGHENRVNCIQWHQDNDCIYSCSDDKYIVEWSIQTCKVKCKWKGDNSSVSSLCISPDG
KMLLSAGRTIKLWVLETKEVYRHFTGHSTPVSSLRFTTVRPKESQPFDGVTGLYFLSGAV
HDRLLNVWQVRSENKEKSAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFEH
ILNGHCKKPLTSNCTIQIATPGKGKKSTPKPIPILAAGFCLDKTSLLLVYGSWFQPTIER
VALNSKDTHICLERDLSNCWAPTVETAITKVRTPVMNSEAKVLVPGIPGHHAPIKPPLSQ
PKEVENKRKLGSNEASIEERLGAMDLDRKGRKDDLQTNSFPILLTQGLESNDLEMLNKVL
QTRNINLIKKTVLRMPLHAVIPLLQELTKRLQGHPNSAVLMVQWLKCVLTIHASYLSTLP
DLVHQLGTLYQLMESRVKTFQKLSHLHGKLILLITQVTASEKMKKVPSPGQKAKLVYEEE
SSEEESDDEIPEKDSDDNWDEDEEKDSEKDEGVGEDNGEEEEEEEEEEDIEDEENGEDRD
VSSEKELNGDSDLDPENESEEE
NT seq 2049 nt   +upstreamnt  +downstreamnt
atggcggccggtggcggcggtagctacgaccccttggccccggcgggggtcccttgcgcc
ttctcgccggacggccaggcctacttcgccctcgcctccggcgacggtcacctgcgggtg
tgggagacggccagcaaccggctgcaccaggaatacgtgccttccgcgcacctcagcggt
acctgcacctgcctggcctgggcgccggcgcggctgcaggccaaggaaagtcatcaaagg
aaaaaaaggaaatcagaagttataggaagcagtgaccaggttgacttgttggctcttggc
acagcagttggtagcattttattgtatagtacagtaaaaggagaattgcacagtaaatta
ataagtggtgggcatgaaaacagagtcaattgcatacagtggcatcaagacaatgactgc
atatatagttgttcagatgataagtatattgtggagtggagtatacagacatgcaaagtt
aagtgcaaatggaaaggagacaacagcagcgtcagttccctgtgtatcagcccagatgga
aagatgttactctcggctggccgaacaatcaaactgtgggttttggagaccaaagaagtc
tacagacacttcacaggccactcgacgcctgtctcatcgcttaggttcacgaccgtcaga
cctaaggagagccagccttttgacggggtcacaggtctctatttcttgtctggagcagta
catgaccggttacttaatgtctggcaggtccggtcagaaaacaaagagaagagtgcagtg
atgtcttttacagtcacagatgaacctgtctatattgacttgactttgtccgagaacaaa
gaagagcctgtcaagttagctgttgtttgcagagacggtcaagtccatctgtttgaacat
atattaaatggacactgcaaaaagcctttgacttcaaactgcacaattcagatagcaaca
cctggaaaaggcaagaaatcaacaccgaaacccatccctattctagcagctgggttttgc
ttagacaaaacatccttactgcttgtgtacggcagttggtttcagcctaccattgagcga
gtggctttgaactccaaagatactcatatatgtttagaaagagacctttccaattgctgg
gctccaacagtagaaacggctataaccaaggtgagaacaccagtgatgaattctgaagca
aaggttctggtgcctgggattcctggacatcacgcccccatcaagcctccgctctcacag
cctaaggaggtggagaataagaggaaattaggcagtaatgaggctagcatcgaggagcgc
cttggagccatggatctggacagaaaaggaaggaaggatgacctgcagacaaacagcttc
ccaatccttctcacacagggcttagaaagcaatgacttagaaatgttaaataaagtgctt
caaaccaggaatataaacctaatcaagaagactgtgctaaggatgcccttgcatgctgtc
atcccactgttgcaggagcttaccaagaggttgcaaggacatcccaatagtgctgtttta
atggttcagtggctgaaatgtgtgctgacgattcatgcgtcgtacctatccacgttgccc
gacctggtacaccagctggggaccctctaccagctaatggaaagcagagtcaaaacgttc
cagaagctctcacacctgcacgggaagctcattcttctcatcacacaagtaacagcatca
gaaaaaatgaaaaaagtgccttcccctggacagaaggcaaaattggtgtatgaagaagaa
tcttctgaagaggagtctgatgatgaaattccagaaaaggattctgatgataattgggat
gaagacgaagagaaagacagtgaaaaagacgagggtgttggtgaagacaatggagaggag
gaggaggaggaagaggaggaggaggacattgaagatgaagagaacggggaggacagagat
gtgtcaagtgagaaagagttgaatggagattctgatctagatcccgagaacgagagtgag
gaagagtga

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