KEGG   Peromyscus leucopus (white-footed mouse): 114696436
Entry
114696436         CDS       T07241                                 
Symbol
Col4a4
Name
(RefSeq) collagen alpha-4(IV) chain
  KO
K06237  collagen type IV alpha
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Pathway
pleu04151  PI3K-Akt signaling pathway
pleu04510  Focal adhesion
pleu04512  ECM-receptor interaction
pleu04820  Cytoskeleton in muscle cells
pleu04926  Relaxin signaling pathway
pleu04933  AGE-RAGE signaling pathway in diabetic complications
pleu04974  Protein digestion and absorption
pleu05146  Amoebiasis
pleu05165  Human papillomavirus infection
pleu05200  Pathways in cancer
pleu05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    114696436 (Col4a4)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    114696436 (Col4a4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    114696436 (Col4a4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    114696436 (Col4a4)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    114696436 (Col4a4)
  09154 Digestive system
   04974 Protein digestion and absorption
    114696436 (Col4a4)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    114696436 (Col4a4)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    114696436 (Col4a4)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    114696436 (Col4a4)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    114696436 (Col4a4)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    114696436 (Col4a4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pleu04147]
    114696436 (Col4a4)
   00536 Glycosaminoglycan binding proteins [BR:pleu00536]
    114696436 (Col4a4)
Exosome [BR:pleu04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   114696436 (Col4a4)
Glycosaminoglycan binding proteins [BR:pleu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   114696436 (Col4a4)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 114696436
NCBI-ProteinID: XP_028729971
LinkDB
Position
13:30460280..30580854
AA seq 1683 aa
MKFSFRWTRSSVTGPWSLIFILFTIRYEYGSGKKYGGPCGGRNCSVCQCFPEKGSRGQPG
PLGPQGPIGPLGPPGPIGIPGEKGLRGDSGLPGAAGEKGDKGPTGVPGFPGLDGIPGHPG
PPGPRGKPGVDGFSGSRGDPGLPGERGAPGPRGPPGHPGENGEKGRSVFISGGIKGIQGD
RGEPGLPGLPGSRGAQGSTGPMGYAGAPGPAGPIGHPGSPGLKGNPAVGIKGQRGEPGEV
GRHGPPGPTLFIQPPDLSLYKGEKGIKGIPGMIGPPGPPGRKGEPGIGTKGEKGIPGFPG
PRGEPGSHGSPGFPGFKGEQGAAGDPGMFGFLGPKGDPGDRGYPGPPGVLLTPSPPLKGP
PGDPGPPGRYGEIGDVGLPGPPGPPGRPGETCPGMMGPPGPPGIPGPPGFPGEPGIPRRF
DCAPGKPGKPGPPGLPGAPGPEGPPGSDVIYCSPGCPGPMGEKGKMGPPGRRGAKGEKGN
EGLCSCPPGPMGPAGPPGLPGRQGSKGDLGLPGWHGEKGDPGQPGAEGPPGPPGKPGALG
PPGHKGAKGDMVTSRVKGQKGERGHDGPPGFPGPRGQDGQDGRAGERGDPGPPGGHQDAT
PGERGPPGLPGPPGNAGPVGPPGLGFPGPPGERGRPGEPGRPGMRGFDGMKGQRGDTISC
NVTYPGNPGPPGFDGPPGPKGFPGPPGAPGMRCPDGQKGQQGKPGMPGIPGPPGFRGDMG
DPGIGGEKGTSPIGPPGPPGSPGIDGQKGFPGDPAFGDPGPPGDRGLPGVPGMKGHKGYP
GCPGAEGPPGIPGSPGLKGPKGRKGSPGFPGIPGPPGHSCERGAPGIPGQPGLPGAPGSP
GAPGWKGQPGDMGPSGPAGMKGLPGLPGLPGADGLRGPPGIPGPTGESGLPGLPGPKGHP
GLPGYPGFPGERGRSGPDGQPGRKGEIGEKGWPGLQGDLGERGAKGSRGPPGDAGEAAII
SPKGDPGDTGPPGDDGFPGQRGDKGSPGTQGGRGDPGRDGPPGLHRGPPGTNGFPGPPGP
PGPPGPPGLKGVIGFPGFPGDQGDPGPPGPPGLPGDDGARGPKGNKGDPASQCGPSGPKG
EPGSPGYQGHPGAPGDQGFPGAEGHRGPPGRPGQPGSSGPPGCPGDPGMPGQKGHPGEMG
DPGPRGFPGDLGRPGPPGVIGPPGSPGLNGLHGLKGEKGAKGTSGLHEMGPPGPMGMPGL
KGERGDPGSPGISPPGLSGEKGLPGPPGRPGPPGPTGAPGRAAKGDIPDPGPPGDWGPPG
PDGPRGAPGPPGSPGNVDLLKGDPGDSGLPGPPGSRGPPGPPGCQGAPGCDGKDGQKGPM
GFPGPPGPPGLPGAPGEKGLPGPPGRKGPVGPPGCRGEPGPPVDVDSCPRIPGLPGVPGP
RGPEGAVGHPGQRGPPGPGCKGEAGLDGRRGQDGIPGPPGPPGRKGDTGEAGCPGAPGPP
GPPGDPGPKGFGPGYLSGFLLVLHSQTDQEPICPVGMPQLWTGYSLLYMEGQEKAHNQDL
GLAGSCLPVFSTLPFAYCNIHQVCHYAQRNDRSYWLSSAAPLPMMPLSEEEIRPYISRCA
VCEAPAQAVAVHSQDQSIPPCPRAWRSLWIGYSFLMHTGAGDQGGGQALMSPGSCLEDFR
AAPFLECQGRQGTCHFFANEYSFWLTTVSPDLQFSSGPSPDTLKDVRAQRQKTSRCQVCM
KYS
NT seq 5052 nt   +upstreamnt  +downstreamnt
atgaagttctctttcagatggaccaggtcctcagtcacaggcccctggtcactaatattt
attctctttaccatacgatatgaatatgggagtggcaagaaatacggcggcccttgtgga
ggaagaaactgctctgtctgccagtgttttcctgagaagggatcgcggggtcaaccagga
ccactggggccacagggaccaatagggcccttgggacccccaggacccattgggattcca
ggagagaagggtctgagaggtgacagtggcctgcctggagcagcaggagagaaaggagac
aagggtccaactggtgtccctggatttccaggtttggatggcatacctggtcatccgggg
cctcccggacccagaggcaaacctggtgtggatggcttcagcggctcaagaggtgatcca
gggcttccaggagaacgaggagctcctggcccaagaggcccccctggtcaccctggggaa
aatggagaaaaaggaaggtcggtgttcatttcagggggcattaaaggtattcagggagac
cgcggggaaccaggactgcccggcttaccaggatctaggggtgcacaaggatcaacaggg
cccatggggtatgctggtgcaccaggaccagcaggacctataggtcatcctgggagccct
gggttgaaggggaatcctgctgtgggaataaaaggacaaaggggagagccgggtgaagtt
ggccggcatggtcctcctgggcccaccctgtttatacaaccacctgatttgagtctctat
aaaggagaaaagggtataaaaggaattcctggaatgattggacctccaggacctccagga
cgcaagggagagcctggtatcgggacaaaaggagagaaaggtattcccgggtttccagga
cctcggggtgagcctggttcccatggatctccaggttttccaggattcaagggggaacaa
ggagcagctggagatcctgggatgttcggatttcttggtccaaagggggatcctggagat
cgcggatacccaggaccaccaggcgtcttgctaactccctctcctccactcaaaggtcct
ccaggggacccaggcccccctggccgctatggagaaattggagacgttgggctaccaggt
cctcccgggcccccaggcagaccaggggaaacttgtccaggcatgatgggacctcctgga
ccaccagggattcctggtcctccaggatttccaggggaacctggtattcctagaagattc
gactgtgccccaggaaaaccagggaagccaggaccacctggcctgcctggagcaccagga
ccagagggcccccctggatcagatgttatatattgtagccctgggtgccctggaccaatg
ggagaaaagggaaagatgggtccaccaggaagaagaggagccaaaggagaaaaaggaaat
gagggactctgtagctgtccacctggtcccatgggacccgctggccctccaggacttcct
ggaagacaaggaagtaaaggagacttagggcttcctggctggcacggagaaaagggtgat
ccaggccagcctggtgctgaaggacctccagggccaccaggaaaacctggtgccttgggg
cctcctggccacaaaggggcaaagggtgacatggtcacatcaagagtgaaagggcaaaag
ggagaaagaggacatgatgggccaccaggatttccaggaccacgtggacaagatggtcag
gatggacgtgctggagaaagaggggatcccggccccccaggcggccatcaggatgcaacc
ccgggtgagagagggcctcccggactgcctggtcctccagggaatgcaggacctgtgggt
cctccaggcctgggatttccaggcccaccaggagagagaggccgaccaggagagccgggg
cgtccaggcatgaggggctttgatggcatgaaggggcagagaggtgacaccatttcttgt
aatgtaacctacccagggaatccaggccctccaggttttgatggacctccaggtccgaag
gggtttccaggtcccccaggtgctcctggtatgagatgtccagatgggcagaaaggtcag
cagggcaaaccaggaatgcctggaattccaggtccaccaggttttcgtggtgacatggga
gatccaggaattggaggtgaaaaggggacctcccctattgggcccccaggtccacctggg
tctcctggaatagatggccagaaaggattcccaggagaccctgcatttggtgacccagga
ccccctggagataggggtcttccaggagtgccaggcatgaaagggcacaaaggttaccca
ggatgccctggggctgaagggccacctggcatccctggatctccaggtctcaaaggtccc
aaaggcagaaaaggaagtcctgggtttccagggatcccaggaccccctggccattcctgt
gaaagaggtgctccagggatcccaggccaaccaggacttcctggagctcccggcagtcca
ggggccccaggttggaaaggccagccaggagacatggggccttctggaccagctggaatg
aagggcctccctggcctcccaggcctcccaggagcagatggtctccgagggcctcctggg
atcccaggccccactggggaaagtggccttcctggccttccaggtccaaagggacaccca
gggctgcctggctaccctggttttccaggagaaagaggaaggtcaggccctgatggacaa
cctggaagaaagggagaaatcggagagaagggctggcctggcttgcagggagacctggga
gagagaggtgccaaaggatccagaggacctcccggtgatgcaggagaagcagccatcatt
tccccaaagggggatcccggggacactggccctccaggagatgatgggttcccaggacag
agaggtgataaaggaagcccagggacacaagggggaagaggagatcccggaagagatgga
ccacctgggctgcacaggggaccgcctgggacaaatgggttccctgggcctccaggtccc
cctggccctccaggcccacctggactaaaaggagtcattggttttccaggatttccaggt
gaccagggtgatccaggtcctccaggcccccctggactcccaggagatgacggagcaaga
ggacctaaaggaaacaaaggtgaccctgccagtcagtgtggtccatctggtccgaagggt
gagccaggtagccctggataccaaggacatccaggagcccctggagaccaaggctttcct
ggagctgaaggacatagaggaccaccaggcagacctggacagccaggctcttctggacca
ccagggtgtccaggtgacccagggatgcctgggcagaagggccatccaggagaaatggga
gaccctgggccaagaggtttcccaggagatttagggaggccaggtcctcctggagtaata
gggccccccgggtctcctggtctgaatggcttacacggtctcaagggtgagaaaggagcc
aaaggtacctcaggtttgcatgaaatgggtccacctgggccaatgggaatgcctgggtta
aagggagagagaggagaccctgggagtccaggaatttctcctccaggcctttctggagaa
aaagggctcccaggacccccagggagaccaggaccacctggtcccactggtgccccagga
agagctgctaaaggtgacatccctgatccaggtcctcctggagactggggacctcccggc
cctgatggcccaagaggagcacctgggcctccgggctcccctgggaatgtcgaccttctg
aaaggggatccaggggactctggtttgcctggaccaccgggctcccgaggcccaccaggc
cctccagggtgtcagggtgccccaggatgtgatggcaaagatggccagaaaggacccatg
ggattcccagggcctccagggccacctggtcttcctggagcacctggagagaagggatta
cctggtcctccaggcagaaaagggcccgtaggccctccaggctgcagaggtgaacccggg
cctcctgtcgatgtggactcctgtcctcgaatcccaggacttcctggagtgccaggtccc
agaggaccagaaggagctgtggggcaccctggacagagaggaccccctggaccagggtgc
aaaggagaggctgggctggacggcaggaggggccaggatggcatccctggacctcctggg
cctccgggacgcaaaggtgacactggagaggctggctgccctggagcaccaggccctcct
ggtccacctggtgatcctgggcccaagggttttggccctggatacctcagtggcttcctc
cttgttctccacagtcagacagatcaagaacctatctgccctgtgggtatgccccagctt
tggactgggtacagtctgttgtacatggaaggacaagagaaggcacacaatcaagatctt
ggtttggcagggtcttgtctccctgtgtttagcacactgccctttgcctactgtaacatc
caccaagtgtgccactatgcccagagaaatgacaggtcctactggctgtccagtgctgct
cctcttcctatgatgccgctctcagaggaagagatccgcccttacatcagccgttgcgct
gtgtgtgaggccccagcacaggcagtggctgtccatagtcaggaccaatccatcccaccg
tgtccacgggcgtggaggagcctctggatcgggtactcgtttctgatgcacaccggagct
ggggaccaaggaggaggacaggcactcatgtcacccggcagctgcctggaggacttcaga
gctgcaccgttccttgaatgccagggccgacagggaacctgccacttctttgcaaatgaa
tacagcttctggctgaccactgtcagcccagacctgcagttttccagtggcccgtcaccg
gacaccttgaaagatgtgcgggcccagcgccagaaaaccagcaggtgccaggtctgcatg
aagtacagctag

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