Peromyscus leucopus (white-footed mouse): 114696661
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Entry
114696661 CDS
T07241
Symbol
Scn8a
Name
(RefSeq) sodium channel protein type 8 subunit alpha isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pleu04040
]
114696661 (Scn8a)
Ion channels [BR:
pleu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
114696661 (Scn8a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ
GPHH
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
114696661
NCBI-ProteinID:
XP_028730368
LinkDB
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Position
20:complement(2891804..3075953)
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AA seq
1988 aa
AA seq
DB search
MAAQLLAPPGPDSFKPFTPESLANIERRIAESKLKKPAKADGSHREDDEDSKPKPNSDLE
AGKSLPFIYGDIPQGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILSPFNL
IRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIAR
GFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVVWPINFNESYLENGTRGF
DWEEYINNKTNFYTVPGMLEPLLCGNSSDAGQCPEGYQCMKAGRNPNYGYTSFDTFSWAF
LALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMATSAGTVSEDAIEEEGEDGVGSPRSSSEL
SKLSSKSAKERRNRRKKRKQKELSEGEEKGDPEKVFKSESEDGMRRKGFRLPDNRIGRKF
SIMNQSLLSIPGSPFLSRHNSKSSIFSFRGPGRFRDPGSENEFADDEHSTVEESEGRRDS
LFIPIRARERRSSYSGYSGYSQCSRSSRIFPSLRRSVKRNSTVDCNGVVSLIGPGSHIGR
LLPEVKIDKAATDSATTEVEIKKKGPGSLLVSMEQLASYGRKDRINSIMSVVTNTLVEEL
EESQRKCPPCWYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAM
EHHPMTPQFEHVLAVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMEL
GLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVV
GMQLFGKSYKECVCKINQDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAM
CLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGVAWTK
VKVHAFMQAHFKQREADEVKPLDELYEKKANCIANHTGVDIHRNGDFQKNGNGTTSGIGS
SVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDVSSESDPEGSKDKLDDTSSS
EGSTIDIKPEVEEVPVEQPEEYLDPDACFTEGCVQRFKCCQVNIEEGLGKSWWILRKTCF
LIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWT
AYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEG
MRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEIRFEIDIVNN
KTDCEKLMEGNNTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKPDEQP
KYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEN
ILYWINLVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVS
PTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN
FAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCSLDKEHPGSGF
KGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIW
EKFDPDATQFIEYCKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFT
KRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRGHLAR
RGFICRKITSNKLENGGTHPEKRGSTPSTASLPSYDSVTKPDKEKQQRAEEGRRERAKRR
KEVRESKC
NT seq
5967 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccagctgctcgcaccacccggccccgacagcttcaagcccttcacgcccgag
tcgctggctaacatcgagaggcgcattgccgagagcaagctcaagaagccggcgaaggcg
gacggcagccaccgggaggacgacgaggacagcaagcccaagcccaacagtgacttggaa
gcagggaagagcttgcctttcatctatggggacatcccccaaggcctggtcgcggtcccc
ctcgaggactttgacccatactatttgacgcagaaaacctttgtagtattaaacagaggg
aaaactctcttcagatttagtgccacgcctgccttgtacattttaagtccttttaacctg
ataagaagaatagctattaaaattttgatacattcagtgttcagcatgatcatcatgtgc
actatcctgaccaactgtgtattcatgacctttagtaaccctcccgaatggtccaagaat
gtggagtacacattcacagggatttacacatttgagtcactagtgaaaatcattgcaaga
ggtttctgcatagacggcttcaccttcctccgagacccgtggaactggctggacttcagc
gtcatcatgatggcatatgtgacagagtttgtggacctgggcaatgtctcagcgctgaga
acattcagggttctccgagctttgaaaactatctctgtaattccaggcctgaagacaatc
gtgggtgccctcattcagtctgtgaagaagctgtccgatgtgatgatcttgaccgtgttc
tgcctgagcgtgttcgccctgattggcctgcagctgttcatggggaaccttcgaaacaag
tgtgtggtgtggcccataaacttcaatgagagctaccttgaaaatggcacccgaggcttt
gactgggaagagtatatcaacaataaaacaaacttttacacggttcctggcatgctagag
cccttgctctgtgggaacagttccgatgctggacaatgcccggagggataccagtgtatg
aaagcaggaaggaaccccaactatggttacacaagctttgatactttcagctgggccttc
ttggcattatttcgccttatgacccaggactattgggagaatttataccagttgacctta
cgagcagctgggaaaacgtacatgatcttctttgtcctggtcatctttgtgggttcgttc
tacttggtgaacttgatcttggctgtggtggccatggcttatgaagagcagaaccaggcc
acattggaagaggccgagcaaaaagaagctgagttcaaagcaatgttggagcagctcaag
aagcagcaggaagaggcccaggctgccgcgatggccacttccgcaggcacggtctcggaa
gatgccattgaagaagagggagaagatggggttggctctccgcggagctcctctgaactt
tctaaactcagctctaagagtgccaaggagcgtcgcaacaggcggaaaaagaggaagcag
aaggaactctccgaaggggaggagaaaggagaccccgagaaggtgtttaagtcagagtcg
gaagacggaatgagaaggaagggcttccggctgccggacaacaggatagggaggaagttc
tccatcatgaaccagtcgctgctgagcatcccgggctcacccttcctctcccgccacaac
agcaaaagcagcatcttcagcttccggggccccgggcggttccgagaccccggctcggag
aacgagttcgcggacgacgagcacagcacggtggaggagagcgagggccggcgcgactcg
ctgttcatcccgatccgggcccgcgagcgccgcagcagctacagcggctacagcggctac
agccagtgcagccgctcgtcgcgcatcttccccagcctgcggcgcagcgtcaagcgcaac
agcacggtggactgcaacggcgtggtgtcgctcatcgggcccggctcgcacatcgggcgg
ctcctgcctgaggtgaaaatagataaggcagctacggacagcgcaacaaccgaagtggaa
atcaagaagaaaggccctgggtctctcttggtctccatggagcagctagcctcttacggg
cggaaggacaggatcaacagcatcatgagtgtcgtcaccaacacgctagtggaagagctg
gaagagtctcagagaaaatgcccgccatgctggtataagtttgccaacactttcctcatc
tgggagtgtcacccctactggatcaaactgaaagagattgtgaacttgatcgtcatggac
ccttttgtggacttggccatcaccatctgcatcgttctgaacacactgtttatggcaatg
gagcatcaccccatgacaccacagttcgagcacgtcttggccgtaggaaacctggtattc
actgggattttcacggccgaaatgtttctgaagctcatagccatggatccctattattat
ttccaagaaggctggaacatttttgacggattcattgtctccctcagtttaatggagctg
ggtctcgcagacgtggaagggctgtccgtgctccggtctttccgactgctccgagtcttc
aaattggccaagtcctggcccaccctgaacatgctgatcaagatcattgggaactccgtt
ggggccctgggcaacctgaccctggtgctagccatcatcgtcttcatctttgccgtggtg
gggatgcagctctttgggaagagctacaaggagtgcgtctgcaagatcaaccaggactgt
gagctgccgcgctggcacatgcacgacttcttccactccttcctcatcgtcttccgcgtg
ctgtgtggggagtggattgagaccatgtgggactgcatggaggtggccggccaggccatg
tgcctcatcgtcttcatgatggtcatggtcatcggcaacttggtggtgctgaacctattt
ctggccttgcttctgagctccttcagtgcagacaacctggcagccaccgatgatgatgga
gagatgaacaacctgcagatctctgtcatccgaatcaagaagggcgtggcttggaccaaa
gtcaaagtgcacgccttcatgcaggctcacttcaagcagcgggaggcagatgaggtcaaa
cctctagacgaactatacgaaaagaaggccaactgcatcgccaaccacaccggcgtggac
atccaccgcaatggcgacttccagaagaatggcaacggtacaacgagcggcatcgggagc
agtgtggagaagtacatcattgacgaggaccatatgtccttcatcaacaacccaaacttg
accgttcgggtgcccattgctgtgggcgaatctgatttcgagaacctcaacaccgaggat
gttagcagcgagtcagaccctgaaggcagcaaagataaactggatgataccagctcctca
gagggaagcaccatcgatatcaagccagaagtagaagaagtccctgtggagcagcctgag
gaatacttggatccagacgcctgcttcacagagggttgtgtccagcggttcaagtgctgc
caggtcaacattgaggaaggtctaggcaagtcctggtggatccttcggaaaacctgcttc
ctcatcgtggagcacaattggttcgagaccttcatcatcttcatgatcctgctcagcagc
ggagccctggccttcgaggacatctacattgagcagaggaagaccatccgtaccatcctg
gagtatgcagacaaggtcttcacctacatcttcatcctggagatgttactcaaatggaca
gcctatggcttcgtcaagttcttcaccaacgcttggtgctggctggacttcctcatcgtg
gctgtctctttagtcagccttatagctaatgccctgggctactcggaactaggtgccata
aagtcccttaggaccctaagagctttgagacccttaagagccttatcacgatttgaaggg
atgagggtggtggtgaatgccttggtgggcgccatcccctccatcatgaatgtgctgctg
gtgtgtctcatcttctggctgattttcagcatcatgggagtcaacctgttcgcgggaaag
taccactactgctttaatgagacttctgaaatccggtttgaaattgatatcgtcaacaat
aaaactgactgtgaaaagctcatggagggcaacaacacggagatccggtggaagaacgtg
aagatcaactttgacaacgtgggggcagggtacctggcccttctgcaggtggcaaccttc
aaaggctggatggacatcatgtacgcagctgtagattcccggaagccggacgagcagccc
aagtatgaggacaacatctacatgtacatctacttcgtcatcttcatcatcttcggctcc
ttcttcaccctcaacctcttcatcggcgtcatcattgacaacttcaatcaacagaagaaa
aagtttggaggtcaggacatcttcatgacggaggaacagaagaagtactacaatgccatg
aagaagctgggctccaagaaaccccagaagcccatcccccgccctttgaacaaaatccag
ggaatcgtctttgatttcgtcactcagcaagcctttgacattgtgatcatgatgctcatc
tgccttaacatggtgaccatgatggtggagacggacacccagagcaagcagatggagaac
atcctctactggattaacctggtcttcgtcatcttcttcacctgcgagtgcgtgctcaag
atgtttgccttgaggcactactacttcaccatcggctggaacatcttcgactttgtggtg
gtcatcctctccatcgtgggaatgttcctggctgatatcattgagaaatactttgtttcc
ccaaccctgttccgagtcatccgattggcccgcatcgggcgcatcttgcgtctgatcaaa
ggcgccaaagggattcgcaccctgctctttgccttaatgatgtcattgcctgccctgttc
aacattggccttctgctcttcctggtcatgttcatcttctccatctttgggatgtccaac
ttcgcatacgtcaagcacgaggctggaattgatgacatgttcaactttgagacatttggc
aacagcatgatctgcctgtttcagatcacgacctcggctgggtgggacggcctgctgctg
ccgatcctgaaccggccccccgactgcagcctggacaaggaacacccaggcagcggcttc
aaaggggactgcgggaacccctccgtgggcatcttcttctttgtcagctacatcatcatc
tccttcctgatcgtggtgaacatgtacatcgccatcatcttggagaactttagtgtagcc
acagaggagagcgctgacccactgagcgaggatgactttgagactttctacgagatctgg
gagaagttcgaccccgacgccacccagttcatcgagtactgtaagctggccgacttcgcc
gacgccctggagcatcctctccgcgtgcccaagcccaacaccatcgagctcatcgccatg
gacctgcccatggtcagcggagaccgcatccactgcttggacatcctcttcgccttcacc
aagcgggtcctgggagacagcggggagctggacatcctgcggcagcagatggaggagcgg
tttgtggcgtccaacccttccaaagtgtcttacgagcccatcacaaccactctgcggcgc
aagcaggaggaggtgtccgccgtggtcctgcagcgcgcctaccgaggacacctggctcgc
cggggcttcatctgcagaaagatcacctccaacaagctggagaacggaggcacacacccg
gagaagagggggagcaccccgtccacggcctccctcccctcctacgacagcgtgacgaaa
cccgacaaggagaagcagcagcgggcggaggaaggaagaagggaaagagccaagaggcga
aaagaggtccgagagtccaagtgttag
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