Peromyscus leucopus (white-footed mouse): 114696734
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Entry
114696734 CDS
T07241
Symbol
Taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114696734 (Taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pleu03021
]
114696734 (Taf5)
03036 Chromosome and associated proteins [BR:
pleu03036
]
114696734 (Taf5)
Transcription machinery [BR:
pleu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
114696734 (Taf5)
Coactivators
SAGA/TFTC/STAGA complex
114696734 (Taf5)
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
114696734 (Taf5)
STAGA complex
114696734 (Taf5)
TFTC complex
114696734 (Taf5)
SAGA complex
114696734 (Taf5)
SLIK complex
114696734 (Taf5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_Gbeta
TFIID_NTD2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Beta-prop_WDR75_1st
DSE1_N
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_Aladin
WDR90_beta-prop_4th
PAC11
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT140_1st
CFAP251_N
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_WDR19_1st
ASA1
Beta-prop_NOL10_N
WD_LRWD1
Tricorn_2nd
Beta-prop_DCAF12
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
Beta-prop_ACSF4
LisH_PAC1
ABM-like
PROPPIN
Motif
Other DBs
NCBI-GeneID:
114696734
NCBI-ProteinID:
XP_028730500
LinkDB
All DBs
Position
1:complement(40666566..40683890)
Genome browser
AA seq
801 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGPPTLLPPPAGDGAGEGSGGTPNNGPNGGGGNVAAVATAAGG
DGGTPKPGVAVSAAAPAGAAAVPAAPTEAGAPHDRQTLLAVLQFLRQSNLREAEEALRRE
ARLLEEAVAGSGAPGELDGAGTEAASALLSRVTASVPGSAAPDPPGTGASVATVFSGSSS
GPVAPGKVGSVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQL
FYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLD
FRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSL
AGEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDP
NAPPQNRIPLPEWKDSDRLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVT
DDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKIL
YGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYY
FVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG
NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF
SRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTP
VVHLHFTRRNLVLAAGAYSPQ
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagctagagcctgagggaccg
ccgacgctgctacctccgccggcgggcgacggcgcaggcgagggtagcggcggcactccc
aacaacggccccaacggcggcggcgggaatgtggcggcggtggcgacggcggccggcggg
gatggcgggacccccaagcctggagtggccgtctctgccgctgccccggcgggggcggcc
gcggtgcccgccgctcccacggaggccggcgctccccacgaccgacagactcttctggct
gtgctgcagttcctacggcagagcaacctccgcgaggccgaagaggcactgcgccgcgag
gcccggctgctggaggaggcagtggcgggctccggagctccgggagagttggacggggcc
ggcacggaggcggctagcgcgcttctcagccgggtcaccgcttcagtccccggctctgcg
gcccctgaccctccgggcaccggcgcttcggtggccacagtgttctcaggttcatcctca
ggtcctgtggctccaggaaaagttggaagtgtagctgtggaagaccagccagatgtcagt
gctgtcttgtcggcctacaaccaacagggagaccctacaatgtatgaagaatactacagt
ggactgaaacacttcattgaatgttctctggactgccatcgagcagaactatcccaactc
ttttatcctctgtttgtacacatgtacttggagctagtttataatcaacatgaaaatgaa
gcaaaatcattctttgagaagttccatggagatcaggaatgttattaccaggatgacctc
cgagtattatctagtcttaccaaaaaggagcacatgaaagggaatgaaaccatgctggac
tttcgaacaagtaaatttgttcttcgtatttcccgtgactcgtaccaactcttgaagcgg
catcttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacatt
gacatctttgatgggatgcctcgtagtaagcagcagatagatgccatggtgggaagtctt
gcaggagaggctaaacgagaagctaacaaatctaaggtattttttggtttattaaaagaa
ccagaaattgaggtgcctctggatgatgaggatgaagaaggagagaatgaagaaggaaaa
cctaaaaagaagaagcctaaaaaggatagtattggatctaaaagcaaaaaacaggatccc
aatgccccccctcaaaacaggatccctcttcccgagtggaaagattcagacagactggac
aaaataatgaatatgaaagaaaccaccaaacgcgtgcgccttgggcccgactgcttaccc
tccatttgtttttatacattccttaatgcttaccagggcctcactgcagtggatgtcact
gatgattccagtctgattgctggaggatttgcagattcaactgtcagagtgtggtctgtg
acacctaaaaagcttcgtagtgtcaaacaagcatcagatcttagtcttatagacaaagaa
tcagatgatgtcttagaaagaatcatggatgagaaaactgcaagtgagttgaagattttg
tatggtcacagtgggcctgtctatggagccagcttcagtccggataggaactatctgctc
tcctcttcagaggacggaactgttagactctggagccttcagacgtttacttgcttggtg
ggatataaaggacacaactacccagtatgggacacacagttttctccttatggatattat
tttgtgtcaggaggccatgaccgagtagctaggctttgggctacagatcactatcagcct
ttaaggatatttgctggccatctcgctgatgtgaattgcactagatttcatccaaattcc
aactatgttgctacgggctctgcagacagaactgtgaggctctgggacgtcctcaatggt
aactgtgtaaggatcttcactggacacaagggaccaattcattccttgacattttctccc
aatgggagattcctggctacaggagcaacagatggcagagtccttctttgggatattgga
catggcttaatggttggagaattaaaaggccacactgatacagtgtgttcacttaggttt
agtagagatggtgaaattttggcatcaggttcaatggataatacggtccggttatgggat
gccatcaaagcatttgaagatttagagactgatgactttactacagccactgggcatata
aatctacctgagaattcccaggagttattattgggtacatatatgaccaaatcaacacca
gttgtacacctacattttactcgaagaaacttggttctagctgcaggagcttacagtccg
caataa
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