Peromyscus leucopus (white-footed mouse): 114696758
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Entry
114696758 CDS
T07241
Symbol
Trim54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114696758 (Trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pleu04121
]
114696758 (Trim54)
Ubiquitin system [BR:
pleu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114696758 (Trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
DUF8512
Sina_RING
DUF349
PHP
CoiA_N
WHD_3
COG2_C
SpoIISA_toxin
DUF1421
DUF5799
Zn_ribbon_FGT1_2
DD_DDX21-DDX50
FlgN
CRLF3_N
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
114696758
NCBI-ProteinID:
XP_028730549
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All DBs
Position
22:36021092..36045009
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AA seq
364 aa
AA seq
DB search
MNFTVGFKPLLGDAHNMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEDEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFETLCAVLEERKGELLQALAREQE
EKLQRVRGLIRQYGDHLEVSSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG
RPEPGYESMEQFSVSVEHVAEMLRTIDFQPGAAGDEEDDEVALDGDESNAGLEEERLDGP
EGLH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcaccgtgggtttcaagccgctgctaggggatgcgcacaacatggacaacctg
gagaagcagctcatctgccccatctgcctggagatgttctccaagcccgtggtgatcctg
ccctgccagcacaacctgtgccgcaagtgtgccaacgacgtcttccaggcctctaacccc
ctgtggcaatcccggggctccacaactgtgtcgtcgggaggtcggttccgctgcccgtcc
tgcaggcatgaggttgtcctggaccggcatggagtctacggcctgcagaggaacctgctg
gtggagaacattattgacatctacaagcaggagtcctcccggccactgcactcgaaggcc
gaacagcacctcatgtgtgaggaacacgaggatgagaagatcaacatctactgcctgagc
tgcgaggtgcccacctgctctctctgcaaggtcttcggcgcccacaaggactgtgaggtg
gcccctctgcccaccatttacaaacgccagaagagcgagctgagcgatggcatcgccatg
ctggtggcaggcaatgaccgtgtgcaagctgtgatcacgcagatggaggaggtgtgccag
accattgaggacaacagccgcaggcagaagcaactgttaaaccagaggttcgagaccctg
tgcgcggtgctggaggagcgcaagggcgaactgctgcaagcgctggcccgggagcaggag
gagaagctgcagcgtgtgcggggcctcatccgtcagtacggagaccacttggaggtttcc
tcgaagctggtggagtccgccatccagtccatggaggagccgcagatggctctctacctc
cagcaggccaaggagctgatcaacaaagtcggggcgatgtcgaaggtggagctggccgga
cggccggagccaggctatgagagcatggagcaattctccgtgagcgtggagcacgtggcc
gagatgctgcggaccatcgacttccagccgggcgccgccggggatgaagaggatgacgag
gtggctttggacggggacgagagcaacgcagggctggaggaggagcggctggacgggccg
gaaggcctgcactga
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