Peromyscus leucopus (white-footed mouse): 114696778
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Entry
114696778 CDS
T07241
Symbol
Tpr
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03013
Nucleocytoplasmic transport
pleu05014
Amyotrophic lateral sclerosis
pleu05200
Pathways in cancer
pleu05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114696778 (Tpr)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
114696778 (Tpr)
09162 Cancer: specific types
05216 Thyroid cancer
114696778 (Tpr)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
114696778 (Tpr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114696778 (Tpr)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114696778 (Tpr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
Imm70
Motif
Other DBs
NCBI-GeneID:
114696778
NCBI-ProteinID:
XP_028730563
LinkDB
All DBs
Position
15:complement(39135551..39193856)
Genome browser
AA seq
2423 aa
AA seq
DB search
MASRGFDGSRRGSLRRAGAREPASEAADGAAQTSGFRASPCSFVSPSAAAAAAAAAAATP
ADMAAVLQQVLERPELNKLPKSTQNKLEKFLADQQSEIDGLKGRHEKFKVESEQQYFEIE
KRLSQSQERLVNETRECQNLRLELEKLNNQVKVLTEKNKELETAQDRNLGIQSQFTRAKE
ELEAEKRDLIRTNERLSQEVEYLTEDVKRLNEKLKESNTTKGELELKVDELQASDVAVKY
REKRLEQEKELLHNQNSWLNTELKTKTDELLALGREKGNEILELKCNLENKREEVLRLEE
QMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEA
KSNELTRAVDELHKLLKEAGEANKTIQDHLLQAEESKDQMEKEMLEKIGKLEKELENAND
LLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKLENKR
INKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSAKLEQAMKEIQRLQEETDKANKH
SSVLERDNQRMEVQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLV
SYRNIEELQQQNQRLLFALRELGETREREEQETTSSKISELQHKLENSLTELEQLRESRQ
HQMQLVDSIVRQRDMYRILLSQTTGMAIPLQASSLDDISLVSTPKRSSTSQTVSTPAPVP
VIESTEAVEAKAALKQLQEIFENYKKEKMDSEKLQNEQLEKLQEQVTDLRSQNTKISTQL
DFASKRYEMLQDNVEGYRREITSLQERNQKLTATTQKQEQIINTMTQDLRGANEKLAVAE
VRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETKQRLS
SQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTEINLHLNTKELLKNSQ
KETATLKQHLNNMEAQLASQSTQRTGKGQPSDKDDVDDLMSQLRQAEEQVNDLKERLKTS
ASNVEQYRAMVTSLEDSLNKEKQVTEEVHKNIEVRLKESAEFQTQLEKKLMEVEKEKQEL
QDDKRKAIESMEQQLSELKKTLSSVQNEVQEALQRASTALTNEQQARRDCQEQAKIAVEA
QNKYERELMLHAADVEALQAAKEQVSKMTSVRQHLEETTQKAESQLLACKASWEERERVL
KDEVSKSVSRCEDLEKQNRLLHDQIEKLSDKVVASMKEVVQAPLNTSLSEDGKSQEQILE
ILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQDLQDSLNAEREKVQVTAKTMAQ
HEELMKKTETMNVVMETNKMLREEKERLEQNLQQMQAKVRKLELDILPLQEANAELSEKS
GMLQAEKKLLEEDVKRWKARNQHLVNQQKDPDTEEYRKLLSEKEIHTKRIQQLSEEVGRL
KAEIARSNASLTNNQNLIQSLKEDLNKVRTEKENIQKDLDAKIIDIQEKVKTITQVKKIG
RRYKTQYEELKAQQDKAMETSTQSSGDHQEQHISVQEMQELKDTLNQSETKTKSLEGQVE
TLQKTLSEKESEARTLQEQTAQLQSELTRLRQDLQDRTTQEEQLRQQITEKDEKTRKAIV
AAKSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYEGRISRLERELR
EHQERHLEQRDEPQEPTNKAPEQQRQITLKTTPASGERGIASTSDPPTANIKPTPVVSTP
SKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQEAMQSEGPVEHV
PVFGSASGSVRSTSPNVQPSISQPILTVQQQTQATAFVQPTQQSHPQIEPTNQELSPNIV
EVVQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTMEAADQVSDDTVEMPLPKK
LKTVTPVGTEEEVMAEESTDGEVETQVYNQDSQDSIGEGVTQGDYTPMEDSEETSQSLQI
DLGPLQSDQQTPSSQDGQGKGDDVIVIDSDDEDDDEENDGEHEDYEEDEDDDDDDEDDTG
MGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGAESNQRAADSQNSGEG
STSAAESSFSQEAAREQQPTSASERQTPRAPQSPRRPPHPLPPRLTIHAPPQELGPPVQR
IQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSPQVAG
VPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPLQVAA
PVTVFTESTTSDASEHASQSVPMVTTSTGTLSTTNETAAGDDGDEVFVEAESEGISSEAG
LEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVRLQTTLRQGVRGRQ
FNRQRGVSHAMGGRGGLNRGNIN
NT seq
7272 nt
NT seq
+upstream
nt +downstream
nt
atggcatcccggggttttgacgggtcccgccgcgggagtctccggcgggcaggcgcgagg
gagccagcgagcgaggcggcggacggggcggctcagacttctggcttccgcgcttcgcct
tgctccttcgtttctccttcggcggcggctgctgctgccgccgccgccgccgcgaccccg
gccgacatggcggcggtgttgcagcaagtgctggagcgccccgagctgaacaagctcccc
aagtcgacccagaacaaacttgagaagttcctagctgatcagcagtccgagatcgatggc
ctgaaggggcggcacgagaaatttaaggtcgagagcgagcaacagtactttgagatagag
aagaggttatcccagagtcaggagcggcttgtgaatgaaacccgcgagtgtcagaacttg
cggctggagcttgagaagctaaataaccaagtaaaagtgttaactgagaaaaacaaagaa
ctcgaaactgctcaagatcgtaatctaggcattcagagccagtttacaagagcaaaggaa
gagttagaagctgaaaaaagagacctaatcagaaccaatgagagattgtctcaggaagtt
gaatatttaacagaggatgttaaacgtctgaatgaaaaacttaaagaaagcaacacgacg
aagggtgaacttgagttaaaggtggatgaacttcaagcttctgatgttgctgtgaagtat
cgagaaaaacgcttagaacaggaaaaggagttgctgcacaaccagaactcatggctcaac
acagagctgaaaaccaaaactgatgagctgttggccctaggaagagaaaaaggaaatgaa
attctggaacttaagtgtaatcttgaaaacaaaagggaagaggttttgagactggaagaa
cagatgaatggcttaaaaacatcaaatgaacatcttcagaaacatgtagaggatttgttg
acaaaattaaaagaggccaaagaacagcaagccagtatggaagagaaattccacaatgaa
ttgaatgctcacataaaactctccaatctatacaagagtgctgctgacgactctgaggcc
aagagcaatgaactgactcgggcggtggatgaactgcacaaacttctgaaagaggctggg
gaagccaacaaaacaatacaagatcatcttctacaagctgaagaatctaaagatcaaatg
gaaaaagaaatgcttgagaaaatagggaaattggaaaaggaattagagaatgcaaatgac
ctgctttctgccacaaaacgtaaaggagcgatcttgtctgaagaagagcttgcagccatg
tctcccactgcagcagctgtagctaaaattgtaaagcctggcatgaaattaactgagtta
tataatgcttatgtggaaactcaggatcagttgcttttggagaaactagaaaataaaaga
attaataagtatctggatgagatagtaaaggaagtggaagccaaagcaccgatattgaaa
cgccagcgtgaagagtatgagcgtgctcagaaagctgtggcgagtttatctgcaaagctg
gagcaagctatgaaggaaattcagcgactgcaggaggaaactgataaagccaacaaacat
tcgtcagtacttgaaagggacaatcagagaatggaagtgcaaataaaagatctttcacaa
cagattagagtgctcttgatggagcttgaagaagcccggggtaaccatgtgatccgtgat
gaagaggtcagctctgccgacataagtagctcgtcggaagtgatatcgcagcatctagta
tcttacaggaatatcgaagagctccagcagcagaaccagcgtctcttatttgctcttcga
gaacttggggaaacccgggaaagagaagaacaagaaacaacatcctctaaaatttctgag
cttcaacataagcttgagaactctctgactgaactggaacagctccgtgagtcacgacag
catcaaatgcagcttgttgattccatagttcgtcagcgtgacatgtaccggattttattg
tcacagacgacgggaatggccattccattacaagcttcaagtttagatgatatttctctt
gtgtcaactccaaaacgttcaagtacctcacagactgtttctactcctgctccggtacct
gtcattgaatccacagaggctgtagaagccaaggccgccctgaaacagttgcaggaaatc
tttgagaactataaaaaagaaaaaatggacagtgaaaaacttcaaaatgagcagttagag
aaacttcaggagcaagtcacagatctgcgctcacaaaacaccaaaatttcaactcaacta
gattttgcttctaaacgttatgaaatgctgcaagataatgttgaagggtatcgccgagaa
ataacgtctctgcaagagaggaatcagaaactcactgcaacaactcagaagcaggagcag
atcatcaacacaatgacgcaagacttgagaggagccaacgagaagctcgctgttgccgaa
gtaagagcagaaaatttgaagaaggagaaagaaatgcttaaattgtcagaagtccgtctt
tctcagcaaagagagtctttattagcggaacagaggggacagaacttgttgctgactaat
ctacagacaatccagggaatactagagcgatcggaaacggaaaccaaacaaaggctgagt
agtcagatagaaaaactggagcacgagatctctcacctgaagaagaagctggagaacgag
gtggaacaaagacatacgcttactcggaatctagatgttcagctgttagatacgaagaga
cagctagatacagagataaaccttcatcttaacacaaaagaactgttaaaaaattctcag
aaggaaactgctacactgaaacagcaccttaataatatggaagcccagcttgcttctcag
tctacgcagagaactggtaaaggtcagcctagtgacaaagatgatgttgatgatcttatg
agtcagctaaggcaggctgaagagcaggtcaatgacttgaaggagagactcaagacaagt
gctagtaatgtggagcagtatcgggcaatggtgactagtctagaagattccctgaacaag
gagaaacaggtgacagaggaagtgcataagaatattgaagtccgtttaaaagaatcagca
gagtttcagacacagttggagaaaaagctgatggaagttgagaaggagaaacaggaactt
caggatgacaagagaaaagccattgagagcatggagcagcagttatctgaattgaagaag
acactttctagtgttcagaatgaagtacaagaagctctgcagagagcaagcacagcttta
actaatgaacagcaagccagacgtgactgtcaggaacaagctaaaatagctgtggaagct
cagaataagtatgagagagaattgatgctgcatgctgctgatgttgaagctctgcaagct
gccaaggaacaggtttcaaagatgacatcagtccgtcagcatttggaagaaacaactcag
aaagcagagtcacagttgttggcatgtaaagcatcctgggaagaaagagagagggtgttg
aaggatgaagtttccaagagtgtgtctcgctgtgaagatctagagaaacaaaacagacta
cttcatgatcaaattgaaaaattaagtgacaaggtagttgcctctatgaaagaggttgtg
caagcaccattaaatacatctctcagtgaagacggaaaatctcaagaacagattttagaa
attcttaggtttatacggcgagaaaaagaaattgctgaaacgaggtttgaggtggctcag
gttgagagtctgcgatatcgacaaagagttgaacttctagaacgggaattgcaagatctt
caggatagcctgaatgcagaaagggagaaggttcaggtgactgcaaaaacaatggctcaa
catgaagaactgatgaagaaaactgaaaccatgaatgtagtcatggaaaccaataagatg
ctcagagaagaaaaggaaaggctcgaacagaacctacagcaaatgcaagcgaaggtgagg
aaactggagttagatattttacctttacaagaagccaatgctgagctaagtgagaaaagc
ggtatgctgcaggcagagaagaagctgctagaagaagatgtcaagcgttggaaggcacgg
aaccagcatctggtaaatcaacagaaagatccagatacagaagaatatcgaaagcttctt
tctgaaaaggaaattcacactaagagaattcaacagctaagtgaagaagttggaagactt
aaggctgaaattgcaagatcaaatgcatccttgactaacaaccaaaatttaatccagagt
ctgaaggaagatttaaacaaagtgcgaactgaaaaggaaaacattcagaaagatttagat
gccaaaataattgatatacaggaaaaagtcaaaacgatcactcaagtcaagaagatcgga
cgcaggtacaagactcagtatgaagagctgaaggcgcagcaggataaggccatggagact
tccactcagtcttctggagaccatcaggagcagcacatctctgtccaggaaatgcaggag
ctcaaagataccctcaaccaatctgaaacaaagacaaagtcactggagggtcaagtggaa
actctgcagaagacattatcagaaaaagagtcagaagcaagaactctccaggagcagact
gcgcagcttcagtctgaactgacccgccttcgtcaggaccttcaggatagaaccacccag
gaggagcagctccggcagcaaataactgagaaggatgaaaaaacaaggaaggcaattgta
gcagcaaagtcaaaaattgcacacctggctggtgtaaaagatcaattaactaaagaaaat
gaagagcttaaacaaaggaatggagctttagatcaacagaaagatgaactggatgtccgg
atgactgctcttaagtcccagtatgaaggacggattagtcgcttagagagagagctcaga
gagcatcaagagagacaccttgagcagagagatgagcctcaggaacccactaataaggct
ccagaacagcagagacagatcacactgaaaaccactccagcttccggggaaagaggaatt
gccagcacatcagacccaccgacagccaatatcaagccaactcctgttgtctctactcca
agtaaagtgacagcagcagccatggctgggaataagtcaacgcccagggcaagtatccgc
ccaatggttacacctgcaactgtcacaaacccaaccactaccccaacggcaactgtcatg
cccaccacccaggtggagtcccaggaagctatgcagtctgaagggccggtggaacacgtt
ccagtgtttggaagtgcgagtggatctgttcgttctactagtcctaatgttcagccctcc
atttctcagcccatcctaactgtacagcagcaaacacaggctacagcttttgtgcaaccc
actcaacagagtcaccctcagattgaacccacgaatcaagagttgtccccaaacatagtt
gaggtggtacagagttcaccagttgagcggccatctacttccacagcagtatttggcact
gtttcagcgacccccagttcctccttgccaaagcgcacccgggaggaggaggaggacagc
accatggaagcagcggaccaggtctctgatgacacggtggagatgcctctcccgaagaag
ctgaagacagtcacccccgtggggaccgaggaagaagttatggcagaagaaagtactgat
ggagaggtggaaactcaagtttataatcaggactctcaagattccattggagagggagtc
acccagggagattatacacctatggaagacagtgaagaaacttcacagtctctacaaatc
gatcttggaccccttcagtcagatcaacaaactccttcttctcaggatggtcaaggcaaa
ggagatgatgtaattgtaattgacagtgacgatgaagatgatgatgaagaaaatgatgga
gaacatgaagattatgaagaagatgaagatgatgatgacgatgatgaagacgacacgggg
atgggagatgagggtgaagatagtaatgaaggcactggtagtgcagatggtaatgatgga
tatgaagctgatgatgctgagggtggtgatgggactgatccaggtacggaaacagaagaa
agtatgggcggagctgaaagtaaccagagagctgctgattcccaaaacagtggtgagggg
agtacaagtgcagctgagtcgtctttctctcaggaggctgctcgagaacagcagcccaca
tcagcatcggagagacagacccctcgagcaccccagtcaccaaggcgcccaccacatcct
cttcctccacgcctgaccattcacgctccacctcaggagttgggaccaccagttcagaga
attcagatgacccggaggcagtctgtagggcgtggacttcagttgactccaggaataggt
ggtatgcaacaacacttttttgatgatgaagacaggacagttccgagtaccccaactctt
gtggtgccgcatcgcactgatgggtttgctgaagctattcattccccacaggttgctggt
gttcctagattccggtttgggccacctgaagatatgccacagacaagttccagccactct
gatcttggccaacttgcttctcaaggaggtttgggaatgtatgaaacacccctcttcctg
gctcatgaagaagagtctggtggccgcagtgttcccactacacctctccaagtagcagct
ccagtgactgtgtttactgagagtaccacctctgatgcttcagaacatgcctctcagtct
gttccgatggtgacaacgtccacaggcactttatccacgacaaacgaaacagcagcaggt
gacgatggagatgaagtgtttgtggaggcagagtctgaaggtattagttcagaggcaggc
ctagagattgacagccagcaggaagaggaacctgtgcaagcatctgatgaatctgatctc
ccctcgaccagccaggaccctccttccagctcttctgtggatactagcagtagtcagcca
aagcctttcagacgagtaagacttcagacaacattgagacaaggcgtccgtggtcgtcag
tttaacagacagagaggtgtaagccatgcaatgggaggaagaggaggactgaatagagga
aatattaattaa
DBGET
integrated database retrieval system
