Peromyscus leucopus (white-footed mouse): 114696926
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Entry
114696926 CDS
T07241
Symbol
Rorb
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
114696926 (Rorb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pleu03000
]
114696926 (Rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pleu03310
]
114696926 (Rorb)
Transcription factors [BR:
pleu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
114696926 (Rorb)
Nuclear receptors [BR:
pleu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
114696926 (Rorb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
114696926
NCBI-ProteinID:
XP_028730732
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All DBs
Position
1:complement(12580153..12763589)
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AA seq
470 aa
AA seq
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MCENQLKTKADATAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQ
RNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQ
QQSGEAEALARVYSSSISNGLSNLNTETGGTYANGHVIDLPKSEGYYNIDSGQPSPDQSG
LDMTGIKQIKQEPIYDLTSVPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQY
TMEELHQLAWQTHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQN
DQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNL
CSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKL
IAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCAAVCK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagaaccagctcaaaaccaaagctgacgccactgcacaaattgaagtgatacca
tgcaaaatttgtggcgataaatcctctgggatccactacggagtcatcacatgtgaaggc
tgcaagggattcttcaggaggagccagcagaacaatgcctcttactcctgcccaaggcag
agaaactgtttgattgacaggaccaacaggaaccgctgccagcactgccggctgcagaag
tgtcttgccctaggaatgtccagagatgctgtaaagttcgggaggatgtccaagaagcag
cgggacagcctgtatgctgaggtgcagaagcaccagcagcggctgcaggagcagcggcag
cagcagagcggagaggcagaggccctggccagggtgtacagcagcagcatcagtaatggc
ctcagcaacctgaacaccgagaccggcggcacctacgccaacgggcacgtcattgacttg
ccgaaatccgagggatattacaacatagattctggtcagccatctcccgatcagtcagga
ctggacatgactggaatcaaacagataaagcaagaacctatctatgacctcacatccgta
cccaacttgtttacctatagctctttcaacaatgggcagttagctccggggataaccatg
actgagatcgatcgaattgcacagaacatcattaagtcccatctggagacatgtcagtac
acaatggaagagctacatcagctggcatggcagacccacacctatgaggaaataaaagcg
tatcaaagcaagtccagggaggctctgtggcagcagtgtgccatccagatcacccacgcc
atccagtacgtggtggagttcgcaaagaggataacgggcttcatggagttgtgtcagaat
gaccagattttacttctgaagtcaggttgcttggaagtggttttagtgagaatgtgccgt
gccttcaacccactaaacaacactgttctgtttgaaggaaaatatggaggaatgcaaatg
ttcaaagccttaggttctgatgacctggtgaacgaagcatttgactttgcaaagaatctg
tgttccttgcagctgactgaggaggagattgctttgttctcctctgctgttctgatatcc
ccagaccgagcctggctgatagaaccaagaaaagtccagaaacttcaggaaaaaatctat
tttgcacttcaacatgtgattcagaagaatcacctggatgatgagaccctggcaaagtta
atagccaagataccaactatcacggcagtctgcaacttgcatggggagaagctgcaggtc
tttaagcaatctcatccagacatagtgaatacactgtttcctccattgtacaaggagctc
tttaatcctgactgtgctgcggtctgcaaatga
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