Peromyscus leucopus (white-footed mouse): 114697243
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Entry
114697243 CDS
T07241
Symbol
Srrm1
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03013
Nucleocytoplasmic transport
pleu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114697243 (Srrm1)
03015 mRNA surveillance pathway
114697243 (Srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114697243 (Srrm1)
03041 Spliceosome [BR:
pleu03041
]
114697243 (Srrm1)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114697243 (Srrm1)
Spliceosome [BR:
pleu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
114697243 (Srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
114697243
NCBI-ProteinID:
XP_037058958
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Position
2:complement(136203722..136235985)
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AA seq
915 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASLKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKSPELPEPSVRTKDSSVQEATS
TSDILKAPKPEPVPEPKEPSPEKNSKKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRH
RSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSSASLSGSSSSS
SSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSSPATPPPKTRHSPTPQQSNR
TRKSRVSVSPGRTSSKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGSKMAVADSVQQR
RQYRRQNQQSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRMQMGKRW
QSPVTKSGRRRRSPSPPPARRRRSPSPAPPPPPPPPPPPRRRRSPTPPPRRRTPSPPPRR
RSPSPRRYSPPIQRRYSPSPPPKRRTASPPPQPKRRASPSPPPKRRVSHSPPPKQRSPPV
TKRRSPSLSSKHRKGASPSRSTREARSPQPNKRHSPSPRPRAPQTSSPPPVRRGASASPQ
GRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPS
PVQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHK
KHKKEKAVAVAPAAPAAPAAVSAATTTSAQEEPAAAPEPRKETESEAEDNLDDLERHLRE
KALRSMRKAQVSPQS
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggggttcttccgcggaacaagtgcggaacaggataatcggttcagcaacaaa
cagaagaagctcctcaagcagctgaaattcgcagaatgtctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaaagagtaactgaaatcctt
ggatttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gattccaaaatgatgcaaatcaaccttactggatttttgaacgggaaaaacgctcgagaa
ttcatgggagagctgtggcccctgctgttgagtgcacaagagaacatcgctgggatcccc
tctgctttcctagagttgaagaaggaagaaatcaaacagagacaaatagaacaagaaaag
ttggcatctctgaaaaaacaagatgaagataaagataagagggataaggaagaaaaagag
agcagcagagagaaaagggagcggtcccgcagcccacggagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcactctcgatct
ccccgtcacagaaccaagagccggagcccttcccctgccccagaaaagaaggagaaatct
ccagagctcccggaaccatcagtgagaacaaaagactcttcagtacaggaggccacgtct
acaagtgacatcctgaaagctcccaagcctgagcctgtaccagagcccaaagaaccttct
ccagaaaaaaattccaaaaaggaaaaggaaaagactagaccaagatcgcgatcacgttcc
aaatcacgatctcggacccgttctcgatcaccttctcatactagaccaagacggcgacat
agatcccgatcaaggtcttactctcctagaaggcggccaagcccaagaaggcgaccatct
cctcgaagaagaactccaccaagacggatgccccctccaccaagacacaggaggagtagg
tctccaggccgacgaaggaggcgctcttccgcatcgttgtctggaagtagctcttcgtcc
tcttcatctcgttcccggtcaccaccaaagaagcctcccaagaggacatccagcccgcct
cgaaaaactagaaggttatctccttcagcaagtcctcctaggcgaaggcacaggccatca
tctccagcaaccccaccgcctaaaactcgccattccccaaccccccagcagtcgaaccgg
acaagaaaaagtcgagtttctgtgtctccgggaagaacttcgagtaaagtgacaaaacat
aaaggtactgagaaaagagagtcaccttcaccagcacccaagccgagaaaagtggagttg
tctgagtctgaagaagacaaaggcagcaagatggctgtagccgattctgtgcagcagagg
cgccagtatagacgacagaaccagcagtcttcatctgaagatgagcggcccaagagatcc
catgtgaagaacggtgaggtaggcaggcgccggagacattccccctcccggagtgcctct
ccatcacctcgaaagcgccagaaagagacttctcctcggatgcagatggggaagcgatgg
caatcgccagtgactaaaagtggtagaaggaggagaagtccctctccaccaccagccaga
aggcgacgatctccttctccagctcctcctccccctcccccccccccccctcctcctcgg
cggcgcagatctcccaccccaccaccacgacgaaggactccttctcctcccccacgccgc
cgctcaccttctccaagaagatactctcctcccatccagaggagatactctccttccccg
cctccaaagaggagaaccgcctcacccccaccccagcccaagcgaagggcatcaccatct
ccaccaccaaagcgccgggtctcccactctccacctcccaaacagagaagccccccagtc
accaagagacgttcgccctccttatcttcaaagcataggaaaggggcttccccaagccgc
tccacccgagaggcccggtcaccacaaccaaacaaacggcattcgccctcaccacgtcct
cgagctcctcagacctcaagtcctccccctgttcgaagaggagcatcagcatcaccccaa
ggaaggcagtccccatctccaagtactaggcccattaggagagtctccaggactccggag
cctaagaagattaaaaaggctgcctcaccaagccctcagtccgtgagaagggtctcttct
tcccgatctgtctctggatctcctgagccagcagctaagaagcctccagcacctccgtct
cctgtccagtctcagtcaccctccacaaactggtcacccgcagtaccagtcaaaaaggct
aaaagcccaacaccaagcccgtcccctgccaggaattctgatcaagaaggaggtgggaag
aagaagaagaaaaagaaggacaagaaacacaaaaaggataagaaacacaagaagcacaaa
aaacacaagaaggagaaggctgtggctgtggcccctgcagctcctgcagcccctgcagcc
gtttctgctgccaccaccacgtcagcacaggaagagcctgcggcagcacccgagcccagg
aaggagactgaaagtgaagctgaggacaaccttgatgacctcgaaaggcacctgagggag
aaggccctgcggtccatgcggaaggctcaagtgtccccacagtcctag
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