Peromyscus leucopus (white-footed mouse): 114697355
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Entry
114697355 CDS
T07241
Symbol
Nipbl
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
114697355 (Nipbl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pleu03036
]
114697355 (Nipbl)
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
114697355 (Nipbl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
114697355
NCBI-ProteinID:
XP_028731440
LinkDB
All DBs
Position
11:24357617..24531896
Genome browser
AA seq
2798 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNSRIAEEVNCLLACRDDN
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAVLARSPNVFREKSMQNRYVQSG
MMMSQYKLSQNSMHSSPASSNYQQTTISHSPSSRFVPPQTSSGNRFMPQQNSPVPSPYAP
QSPAGYMPYSHPSSYTTHPQMQQASVSSPIVAGGLRNIHDNKVSGPLSGNSANHHADNPR
HGSSDDYLHMVHRLSGDDGDSSTMRNAASFPLRSPQPVCSPAGSDGTPKGSRPPLILQSQ
SLPCSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQNEKAAMYDIISSPTKDSTKLTL
RLSRVKSSDMDQQEDMLSGMENSTVSENDIPFNVQYPGQTSKTPITPQDVNRPLNAAQCL
SQQEQTAFLPANQVPVLQQNTSAATKQPQTSVVQNQQQASQQGPIYDEVELDALAEIERI
ERESAIERERFSKEVQDKDKPLKKRKQDSYPQEAGGAPGGNRPASQETGSTGNGSRPALM
VSIDLHQAGRVDSQASITQDSDSIKKPEEIKQCNDAPIPVLQEDVIGSLKSIPENHPETP
KKKSDAELSKSEMKQNESRLSESKPNENQLVETKSNESKLETKTETQTEELKQSENRTTD
SKQNEAVVEPKQNENRLCDTKPNENKQNNTRSETTRSRPETPKQKAESRPETPKQKGEGR
PETPKQKGEGRPETPKQKGEGRPETPKQKGEGRPETPKHRHENRRDAGKPSTEKKPDVSK
HKQDIKSDSPRLKSERAEALKQRPDGRSESLRRDHDSKQKSDDRGESERHRGDQSRVRRP
ETLRSSSRNEHSIKSDGSKTEKLERKHRHESGDSRDRPSSGEQKSRPDSPRVRQGDTNKS
RPGFKSPNSKDDKRTEGNRSKADSNKAHADNKAEFPSYLLGGRSGALKNFVIPKLKRDKD
GNITQETKKMDMRGEQKDKVEKMGLVEDLNKGAKPVVVLQKLSLDDVQKLIKDREDKARS
SLKSIKNKPSKSNKGSIDQSVLKELPPELLAEIESTMPLCERVKMNKRKRSTVNEKPKYA
EISSDEDNDSDEAFESSRKRHKKDDDKAWEYEERDRRSSGDHRRSGHSHEGRRSSGGGRY
RNRSPSDSDMEDYSPPPSLSEVARKMKKKEKQKKRKAYEPKLTPEEMMDSSTFKRFTASI
ENILDNLEDMDFTAFGDDDEIPQELLLGKHQLNELGSESAKIKAMGIMDKLSTDKTVKVL
NILEKNIQDGSKLSTLLNHNNDTEEEERLWRDLIMERVTKSADACLTTINIMTSPNMPKA
VYIEDVIERVIQYTKFHLQNTLYPQYDPVYRLDPHGGGLLSSKAKRAKCSTHKQRVIVML
YNKVCDIVSSLSELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAIKLVTAVFSRYE
KHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDVDGEPMYIQMVTALVLQLIQCVVHLPS
SEKDPNSEEDSNKKVDQDVVITNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFV
QDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAVT
SKMDQGSIERILKQVSGGEDEIQQLQKALLDYLDENTETDPSLVFSRKFYIAQWFRDTTL
ETEKAMKSQKDEESSDGTHHAKEIETTGQIMHRAESRKKFLRSIIKTTPSQFSTLKMNSD
TVDYDDACLIVRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVVAVDPSI
LARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDTGISVRK
RVIKILRDICIEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPHNDKEAM
TRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDSSYKPVKKACTQLVDNLVEHILKYE
ESLADSDNKGVNSGRLVACITTLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQNDFMVICN
VAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTQNFKFV
WACFNRYYGAISKLKSQHQEDPNNTSLLTNKPALLRSLFTVGALCRHFDFDLEDFKGNSK
VNIKDKVLELLMYFTKHSDEEVQTKAIIGLGFAFIQHPSLMFEQEVKNLYNTILSDKNSS
VNLKIQVLKNLQTYLQEEDTRMQQADRDWKKVAKQEDLKEMGDVSSGMSSSIMQLYLKQV
LEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPAMRNKADQQLVEID
KKYAGFIHMKAVAGMKMSYQVQQAINTCLKDPVRGFRQDESSSALCSHLYSMIRGNRQHR
RAFLISLLNLFDDTAKTEVTMLLYIADNLACFPYQTQEEPLFIMHHIDITLSVSGSNLLQ
SFKESMVKDKRKERKASPTKENESSESEEEVSRPRKSRKRVDSDSDSDSEDDVNSVMKCL
PENSAPLIEFANVSQGILLLLMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGV
HFHPKQTLDFLRSDMANSKLTEDVKRSIVRQYLDFKLLMEHLDPDEEEEEGEVSASTNAR
NKAITSLLGGGSPKNNTAAETEDDESDGEDRGGGTSGSLRRSKRNSDSTELAAQMNESVD
VMDVIAICCPKYKDRPQIARVVQRTSSGFSVQWMAGSYSGSWTEAKRRDGRKLVPWVDTI
KESDIIYKKIALTSANKLTNKVVQTLRSLYAAKDGTSS
NT seq
8397 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgccccatgtccccataactactcttgcggggattgctagtctcaca
gacctcctgaaccagctgcctcttccatctcctttacctgctactactacgaagagcctc
ctctttaattcacgaatagcagaagaggtgaactgccttctggcctgtagggatgacaat
ttggtttcacagcttgtccatagtctcaaccaggtatcaacagatcacatagaactgaaa
gataaccttggcagtgatgacccagaaggtgatataccagtcttgttgcaggccgtcctg
gcaaggagtcctaacgttttcagggagaaaagcatgcagaacagatatgtacaaagtgga
atgatgatgtctcagtataaactttctcagaattccatgcacagtagtcctgcatcttcc
aattaccaacaaaccactatctcacatagcccctccagccggtttgtgccaccacagaca
agctctgggaacagatttatgccacaacaaaacagcccagtgcctagtccatatgcccca
cagagccctgcaggatacatgccatattcccatccttcaagttatacaacacatccacag
atgcagcaagcatcggtatcaagtcctattgttgccggtggcttgagaaacatccatgat
aacaaagtttctggtccattatctggcaactcagctaatcatcatgctgataaccctaga
catggctcaagtgacgactacctacacatggtgcacaggctaagtggtgatgatggcgat
tcttcaacaatgaggaatgctgcatcctttcccttgaggtctccgcagccagtgtgttcc
cctgctggaagtgatggaactcctaaaggatcaagaccacccttaattctacaatctcag
tctttaccttgttcatcacctcgagatgttcctccagatatcttgctagattctccagag
agaaaacaaaaaaagcaaaagaaaatgaaattaggcaaggatgaaaaagaccagaatgag
aaagctgcaatgtatgatataattagttctccaaccaaggactctactaaacttacgtta
agactttctcgtgtaaaatcttcagatatggaccagcaagaggatatgctatctggtatg
gaaaatagcactgtttcagaaaatgatattccttttaatgtgcagtatccaggacagact
tcaaaaacacccattactccacaggacgtaaaccgcccacttaatgctgctcagtgtttg
tcgcagcaagaacaaacagcattccttccagcaaatcaagtgcctgttttacaacagaac
acttccgctgctacaaaacagccacagacttctgtagtgcagaatcagcaacaggcgtca
caacaggggcccatatatgacgaagtggaattggatgcactggctgaaattgagcggata
gagagagaatcagccattgaaagggagcgcttctcaaaggaagttcaagataaagataaa
cctttgaaaaaaaggaaacaagattcttacccacaggaggctgggggtgctccaggaggt
aatagaccagcttctcaggagacgggttctacgggaaatgggtcaaggccagcattaatg
gttagcattgatcttcatcaggcaggaagagtggactctcaggcttctataactcaggat
tcagactccataaaaaagcctgaagaaatcaaacagtgtaatgatgcacccattcctgtt
cttcaggaagatgttattggaagtcttaagtctataccagaaaatcatcctgagacacct
aaaaaaaagtctgatgctgagctctcaaaaagtgaaatgaaacaaaatgaaagtaggttg
tcagaatctaaaccaaatgaaaaccaactggtggagaccaagtcaaatgaaagtaagtta
gaaactaaaactgagacccaaacagaagaacttaaacagagtgagaacagaacaacagac
tccaaacaaaacgaggctgtagttgagcctaaacagaatgaaaatagactatgcgacaca
aaaccaaatgagaacaaacaaaacaataccaggtcagaaacaacaagatcaagacctgaa
accccaaagcagaaagctgaaagccggcctgaaactccaaagcaaaagggtgaaggtcga
cctgaaaccccaaaacagaagggtgagggacgacctgagactccaaagcaaaagggtgaa
ggccggcctgaaactccaaagcagaaaggtgaaggccggcctgaaaccccaaaacacagg
catgaaaataggagggatgctggaaagccatcaacagagaaaaagcccgatgtgtctaag
cataaacaggatatcaaatctgactcacctcgcttaaaatcagaaagagctgaagcctta
aagcaaagacctgatgggcgatctgagtcactaagacgtgaccatgatagtaaacaaaaa
tcagatgacaggggtgagtcagaacgacatcggggggatcagtcaagggttcgaagacca
gaaacattgagatcttctagcagaaatgaacatagcattaaatctgatggttcaaaaact
gaaaagttagaaagaaaacacaggcatgaatcaggggactcacgggacagaccttcttct
ggggaacaaaaatcaagaccagacagtcctcgtgtaagacaaggagatactaacaaatcc
agacctggttttaagtcaccaaatagtaaggatgacaaaaggacagagggtaacagaagc
aaagcagacagtaataaagcgcacgctgacaataaggccgaatttccaagctatttgttg
gggggcaggtctggtgcattgaaaaattttgtcattccaaaactcaagagggataaagat
ggcaatattactcaggaaactaagaaaatggacatgagaggagagcagaaagacaaagta
gaaaaaatgggattagttgaagatctaaacaaaggcgctaagcctgtagttgttctgcaa
aaactgtcgctggatgatgtccagaagctaattaaagatagagaggataaagcaagaagt
tcccttaagtctatcaagaataagccatccaagtcaaataaaggtagtatagatcaatca
gtgttaaaagaattgccccctgaactcctggcagaaattgaatctaccatgccactttgt
gaacgtgtgaaaatgaacaaacgcaaacgtagcacagttaatgaaaagccaaaatatgct
gaaatcagttcagatgaagataatgatagtgatgaagcttttgaatcctctaggaaacgg
cataaaaaagatgacgataaagcttgggaatacgaagagcgtgatagaagaagctctggg
gatcataggagaagtggccactcacatgaaggaagaaggagctcgggtggtggtcgttac
cgaaaccgaagtccatcagattctgatatggaagattactctcctcctcccagccttagt
gaggttgctagaaaaatgaagaaaaaagaaaaacaaaagaaaaggaaagcttatgagccg
aaactaacacctgaagaaatgatggattcttcaacttttaagagatttacagcctcaata
gagaatattttggataatttagaagatatggattttactgcatttggcgatgatgatgaa
attcctcaggaactgctgttaggaaaacatcagcttaatgaacttgggagtgaatctgct
aaaattaaagccatgggtataatggacaagctttcaactgacaaaactgtgaaagttcta
aatatattggagaagaatattcaggatggatcaaagctttccactttgttaaatcataat
aatgatactgaagaagaagagagattgtggagagaccttattatggagagagttacaaaa
tcagcagatgcctgtcttacaactatcaacattatgacatctcctaacatgccaaaagct
gtatacattgaagatgtaattgaaagagttatacagtatactaaatttcacttacagaat
acactctatccccagtatgaccctgtttacagattagatccacatggaggagggttatta
agttcaaaggccaagcgggctaaatgttctactcataagcagagagtaatagtaatgctt
tataacaaagtttgtgacattgttagcagcttatcagaattgcttgagatacagcttctt
acagacacaacgattcttcaggtttcatcaatgggaataacaccattttttgtggaaaac
gtcagtgaactacagttgtgtgctattaagttagtcactgcagtattctcaagatatgaa
aagcataggcagttaattttggaagaaatttttacttcacttgcaagattaccaactagc
aagagaagtttaaggaatttcaggttaaatagtagtgatgtggatggagaacctatgtat
attcagatggttacagcactagttttacaacttattcagtgtgtagttcacttaccatca
tcagagaaggatcctaattcagaagaagactcaaacaaaaaagttgaccaggatgttgtc
attactaactcttatgaaacagctatgagaacagcccaaaactttctttccatcttcctt
aaaaaatgtggtagtaagcaaggtgaagaagactacagaccactttttgaaaattttgtc
caagaccttctttcaacagtcaataagcccgagtggccagctgctgaactgctccttagc
ttgttagggagactgttggttcatcagtttagtaataagtcaacagaaatggctttaaga
gtggcatctcttgattaccttggaactgttgctgcgcgactgagaaaagatgctgttacc
agcaagatggatcaagggtctatagaacgaattttaaaacaggtttccggaggagaagat
gaaatccaacaattgcaaaaggcattacttgattatttggatgagaacactgagactgac
ccttcactggtgttttctcgtaaattctatatagcccaatggtttcgtgacacaactctg
gaaacagaaaaagcaatgaaatcacaaaaagatgaagaatcatctgatggaacacatcat
gcaaaagaaattgagacaactggtcaaataatgcatcgagctgaaagccggaaaaagttc
cttagaagcattatcaaaaccacaccgtctcagttcagcacattaaagatgaactctgat
actgtggactatgatgacgcttgcttgattgttcgatacttggcctctatgaggccgttt
gcccagagctttgatatttatttgacgcagatactacgagttcttggtgaaaatgcaatt
gccgttcgaacaaaagccatgaagtgtttatctgaggttgttgctgtagaccccagtatt
ctagcaaggcttgacatgcagcgaggagttcatggacgattaatggataactccactagt
gttcgagaggcggccgtggaattactaggtcgatttgtcctttgtcgacctcagcttgct
gagcagtattatgatatgctgattgaaagaatattggatactggtatcagtgtcaggaaa
agggtaataaagattttaagagacatctgtattgaacaaccaacatttccaaaaattaca
gaaatgtgtgtaaaaatgattcgtagagtcaatgatgaagagggcattaagaaattagta
aatgaaacattccaaaaactctggtttactccaactccacataatgacaaagaagcaatg
acaaggaaaatcttaaacatcactgatgtggttgcagcatgtagagatactggatatgac
tggtttgagcaactccttcaaaatttgttgaagtctgaagaggattcttcatataaacct
gtgaagaaagcttgtactcaacttgttgataacctagttgagcatattcttaaatatgag
gagtctctagctgattcagacaataaaggtgtgaattctggaagattagtagcttgtata
accactttgttcttattcagcaaaataagaccccaactcatggttaaacatgccatgact
atgcagccgtaccttaccactaaatgtagtacgcaaaatgatttcatggttatctgcaat
gttgcaaaaatccttgagttagttgtaccactgatggaacacccaagtgaaactttcctt
gccactattgaagaagatctgatgaagctgatcattaaatatggcatgactgtagtacag
cattgtgtgagctgtcttggggctgttgtaaataaagtgacacagaattttaaatttgtg
tgggcctgtttcaatagatactatggtgccatttcgaaattaaaaagtcagcatcaagaa
gacccaaataacacttcacttttaacaaataaaccagcacttcttaggtccctcttcact
gttggagcactctgtcggcattttgattttgatctggaagattttaaaggcaacagtaag
gttaacataaaggataaagtacttgagctgttgatgtattttacgaaacactcagatgaa
gaagtacaaacaaaagccatcattggtctaggctttgcctttatacagcatccaagtcta
atgtttgagcaagaagtgaagaatctgtataatactattttatctgataagaactcctca
gtgaatttaaaaatacaagtgttaaagaacctccagacgtacctccaagaagaggacacg
cggatgcagcaagcagaccgagactggaagaaagttgcaaagcaggaagacttaaaagag
atgggagatgtttcctcggggatgagtagctccatcatgcagctttacctcaaacaggtg
cttgaggccttctttcacacccagtcaagtgtacgccactttgctctgaatgtgatcgca
ttgactctaaaccaaggtcttattcatccagttcagtgtgttccatatttaattgccatg
ggcacagatccagaacccgctatgaggaacaaggctgatcagcagcttgtagaaatagac
aaaaaatatgctggattcattcatatgaaagcagtggctggtatgaagatgtcttaccag
gtacaacaggcgatcaacacgtgcctaaaagatcctgtcaggggtttcagacaagatgag
tcctcgagtgctttatgttcacacctctactccatgatccgtggaaaccgccagcacaga
cgcgcctttcttatttccttactcaacctctttgatgacacagcaaaaacagaagtgact
atgctcttgtacatagcagacaatctagcctgttttccataccagactcaggaagagccc
ttgtttataatgcatcacatagacattacgctctcagtttccggtagtaacctattgcag
tcattcaaggagtctatggtaaaggacaaaaggaaagaaagaaaagcatcccctactaag
gagaatgagtccagtgagagtgaagaggaagtttccaggcctcggaaatctcggaagcgg
gtagattcggattcagactctgactctgaagatgatgtaaactcagtgatgaaatgtttg
ccggaaaattcagcccctttaattgaatttgcaaatgtttcccagggtattttattactt
cttatgttaaaacaacatttgaagaatctctgtggattttctgatagtaaaattcagaaa
tattctccatctgaatctgcaaaagtatatgataaagccattaaccgaaaaacaggggtt
cattttcaccccaaacaaacactggacttcctgcgaagtgacatggctaattccaaacta
acggaggatgtgaagaggagcatagtaaggcagtacctagactttaaacttctcatggaa
catctggaccctgatgaagaagaagaggaaggcgaggtgtcggccagcacgaatgctcgg
aacaaagcaattacctcgctgcttggaggaggcagccctaaaaataacacagcggcagag
acagaggatgatgaaagtgatggggaggatagaggaggaggcacttcagggtcattgaga
aggtcaaaacgaaattcagactctaccgagttggcagcacagatgaatgaaagtgttgac
gtcatggatgtcatcgctatttgctgtccaaagtacaaagaccgaccacaaattgcaaga
gtagtacagagaaccagcagtggcttcagtgttcagtggatggcaggctcctacagtggc
tcctggacggaggctaagcgccgcgatggccgcaaactggtgccttgggtagacactatt
aaagagtcagacattatttacaaaaaaattgctctaacgagtgctaataagctgactaat
aaagttgttcagactttacgatccctgtatgccgccaaggacgggacttccagctaa
DBGET
integrated database retrieval system
