Peromyscus leucopus (white-footed mouse): 114697469
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Entry
114697469 CDS
T07241
Symbol
Taf1c
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pleu03021
]
114697469 (Taf1c)
Transcription machinery [BR:
pleu03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
114697469 (Taf1c)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
114697469
NCBI-ProteinID:
XP_028731563
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All DBs
Position
5:complement(122136425..122143693)
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AA seq
841 aa
AA seq
DB search
MDFPSSLRPSLFMAGPLGMTDGPDLSFMCSWRDALTLPGSQPQNCKDGTLPLAKNLLWEP
TTPGPLPLLPPGHDPWEPGMTPRDLLFRGGHRNQFRPQVGLDVTEQLSHFLWDHGDIAFA
PLGKLMLENFRLEGNKGYSKKMTIVSAKRLLQDLGGHQPWGCPWAFLSHRLRRFSILGGP
VLSRSVSVLMGRLLHEELAFRWEQLLLDEAFTGGALAWLPGRTARAGQLVYPSGGALDKL
YFQEVSVNSGGNPRVLEDPGHIQLRGPVRQVVTSTVQGETFLAVRSDYHCAMWKTDKQGP
PAPLQVLQVEKGATGVSLSPHLPGEMAICSRSGAVCLWTPQDGLQLIYKDPETLAFRDPS
PWRWTDFTAHPRVLTVGDRTGVKMVDIQGPPGCGLLLFRAGAEAACQKGERVLLAQYLGQ
PGPTCTPLHLICTQFSIYLMDERLPLVPMLKWDHGLPSAPLLARLLPPASPGYPRPLLLG
GQGGQLQLLHITGEGTSVPQLAGPPQSLPSIIDSLSAFPPLEPKRQQQLQERLEAPVIGL
AAAPPCASAPALLLFQLSAAGDIFYQHLRLQPASSLGEGEPRGHHSAPEGPASKAVTPVD
QSSWTPQATVRCSRWMEALMELAPPCPVWAAPTFSHRRFLSHMEQQKSQTMSQKLRAAMA
KGKLLRPEDLGTLPRAEPPPAPQCGQQDELTERLAEAWEGGVASWWKRHQSQTSGSQTQT
KRPKRRTQLASTFSSLTSYLDFPDTSSPPCSQDHSTSEAWPRPPGTPLSQELTQELWAQG
VQRERRQTLRDFMAKLPLKDTPGPVATPPSQVSSLQSMPFKQQAPVLSGSHPPRKKPRMG
F
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggacttccccagctctctgcgcccttcattgtttatggctggtcctcttggcatgact
gatggccctgacctgtccttcatgtgcagctggagagatgcactgaccctgccagggtcc
cagccacagaactgcaaggacgggacactgccattggccaagaacctgctgtgggagcca
acgacaccaggacccctccccctgctgcctcctggtcatgatccctgggaacctggcatg
acccctcgggatctccttttccggggaggtcaccgcaaccagttccggcctcaagttggg
ctggatgtcactgagcagctcagccacttcttgtgggaccatggggacatagccttcgca
cccctggggaagctcatgctggagaacttcagattggaggggaacaagggctactcgaaa
aagatgaccatagtcagcgcgaagaggctgcttcaggacctcggtggacaccagccctgg
gggtgtccttgggccttcctcagccaccggcttcgtcgcttctccatccttgggggccct
gtcctgagcaggtcagtgtccgtgcttatggggaggctgctgcatgaagagctggctttt
cggtgggagcagttgctgctggatgaggccttcactgggggtgccttggcctggctccct
ggaaggacagcacgggctgggcagctggtctaccctagcggaggtgccttggacaagctg
tatttccaggaggtcagtgtgaattcaggtggcaatccccgggtgcttgaggaccctgga
cacatccagctgcgggggcctgtacggcaggtggtgaccagcactgtccagggagaaaca
tttctggccgtccgctctgactaccactgtgccatgtggaagactgataagcaggggccc
ccagcacccctgcaggtgctgcaggtggagaagggggccactggtgtcagcctcagccct
cacctgccaggagagatggccatctgcagccgttctggagctgtgtgtctgtggacccca
caagatgggctgcagctcatctacaaggaccctgagacgctggccttccgtgatccttct
ccctggcgctggacagacttcactgcccacccccgggtgctgactgtgggtgaccgcaca
ggtgtgaagatggttgacattcagggtcccccaggctgtgggctgctgctgttccgtgct
ggagcagaggctgcctgccagaaaggagagcgggtgctacttgcccagtaccttgggcag
ccaggtcctacctgtactcctctgcatctcatctgcacccagttctcgatatacctgatg
gatgagcgcctccccctggtgccaatgctcaagtgggaccatggcctgccgtctgcaccc
ctgcttgcccgcctgctacccccagctagccctggctacccacggcccctgctactgggg
ggccagggtggacagcttcagctgctgcatataacaggagaggggacctccgtgccccag
ctggcaggacctcctcagtctctgccctccatcatcgactccctctccgcctttcctcca
ctggaacccaagaggcagcagcagctgcaggagcgcctggaggcaccagtcataggtctg
gctgccgccccaccctgtgcctcagccccagcactgctgctcttccagctgtcagcagct
ggggacatcttctatcagcacctacgcctccagccagcctctagtcttggagaaggagag
ccacggggtcatcactcagcaccagagggccctgcatccaaggcagtaacacctgtggac
cagtcctcttggacccctcaggccactgtccgttgcagccgttggatggaggccctgatg
gagctggcccctccttgtccagtctgggccgcccccaccttttcccaccgtcgttttctg
agccacatggagcagcagaagagccagaccatgtcacagaagctccgagcagccatggcc
aaggggaagctcttgcggcctgaggatctgggtacactccccagggcagagccgccccct
gcacctcagtgcggccagcaggatgagctcactgagcgcttggcagaagcctgggaaggt
ggggtagcctcctggtggaaaaggcatcaaagtcagacctcagggtcccagacacagacc
aagcggcctaagcgccggactcagctggctagtaccttttcctcacttacgagctacttg
gacttcccagataccagcagccccccttgtagccaagaccattctacctcagaggcctgg
cctcggcctccagggaccccactctcccaggagttgacacaggagctgtgggcccaaggt
gtacagcgtgaacgtcggcagaccctccgggacttcatggccaagctgccacttaaggac
actccaggacctgtggctacaccgccctcccaggtctccagcctccagtccatgcccttc
aagcaacaagcacctgtcctctctggctcccatcctccccggaagaaaccacgaatgggc
ttctga
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