Peromyscus leucopus (white-footed mouse): 114697584
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Entry
114697584 CDS
T07241
Symbol
Ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pleu03021
]
114697584 (Ctr9)
Transcription machinery [BR:
pleu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
114697584 (Ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
TPR_Slam
ARM_TT21_4th
TPR_9
ANAPC3
TPR_EMC2
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
114697584
NCBI-ProteinID:
XP_028731670
LinkDB
All DBs
Position
1:complement(94063449..94090557)
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AA seq
1171 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEEF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSD
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVV
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGETEATKE
KKRGGGGGRRSKKGGEFEEFVNDDTDDDLPISKKKKRRKGSGSEPEGEEEEGGERKRKRR
RRPQKGEEGSDDDDTENGPKPKKRRPPRAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADEGHPRNSNSDSDDDERPTRRASSESESDDNQNKSGSEAGSPPRSGRQESE
EDSDSDQPSRKRRRSGSEQSDNESVQSGRSPSGGSENDSRPASPSAESDRESEQGSDNEG
SGQGSGNESEPEGSNNEASDRASERGSDDSD
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggctccatcgagattcccctccgggatactgacgaggtcattgaacttgac
ttcgatcagttaccggagggagatgaagttatcagtattctgaagcaggaacacacacaa
ctgcacatatggattgctttggcgctggagtactacaagcaagggaaaacagaagagttt
gtaaagttgctggaagctgcacggatagatggcaatttggactatcgagaccatgagaaa
gaccagatgacttgcttggatacattggcagcctactatgtgcaacaggctcggaaagaa
aagaacaaagacaataagaaggaccttattacacaggcaaccttgttgtatacaatggct
gataaaattattatgtatgatcagaaccatttgttgggaagagcctgcttctgcctgctc
gaaggtgacaaaatggatcaggctgatgcacagtttcattttgtacttaaccagtctcca
aacaatattccagcccttcttgggaaagcttgcatttcatttaacaagaaggattataga
ggagctcttgcttactataaaaaagcattgcgtactaacccaggatgtccagctgaagtt
cgtttaggaatgggccattgctttgtcaaacttaacaaactggagaaagctcgactagca
ttcagcagagccctggaactcaactctaagtgtgtgggagcactggttggactggctgtt
ctggaactcaacaataaagaggctgattccatcaaaaatggtgtgcagcttctttccaga
gcctacactattgaccctagcaaccctatggtactgaaccacttggcaaaccactttttc
ttcaagaaggattatagtaaagtgcagcacctggctctccatgcattccacaacacagag
gtggaggctatgcaagcagaaagctgttaccagctggctcgatcattccacgttcaggaa
gactatgaccaagcctttcagtactactaccaagccacacagtttgcttcatcctccttt
gtactgccgttttttggtttgggacaaatgtatatttatcgaggagacaaagagaatgcg
tctcagtgcttcgagaaagttttgaaagcttatcccaacaattacgaaactatgaaaatt
cttggctctctctatgctgcttcagaagatcaggagaaacgagacatagcgaagggccat
ttgaagaaggtcacagaacagtatcctgatgatgtggaagcttggattgaattggcccag
atcttagaacagactgacatacagggtgccctttcagcctatggaacagccacccgcatc
ctgcaggagaaggtgcaggccgatgtccctcctgagattctgaataatgttggggccctc
cattttagacttggaaacctaggcgaagcaaagaaatacttcttggcatcactggaccgt
gcaaaggcagaagccgagcatgatgaacactattacaacgccatctctgttaccacgtcc
tacaacttagccaggctctacgaggccatgtgtgaattccatgaagcagagaaactgtac
aaaaacattttacgagagcatcctaactatgttgactgctatcttcgcctaggagccatg
gccagagataaaggaaacttctatgaagcttcagattggtttaaggaagcccttcagatc
aatcaggatcacccagatgcctggtctttgattggtaacctccatctggccaaacaagag
tggggcccgggccagaagaagtttgagaggatattaaaacagccagccacacagagtgac
acctactctatgctggcccttggcaacgtgtggctccagactttgcaccagccaacccga
gaccgagaaaaggaaaagcgtcatcaagaccgtgccctggccatctacaaacaagtcctc
agaaatgatgccaagaacctgtatgctgccaatggcataggagcagtattggcccacaaa
ggatacttccgtgaagcccgtgatgtgtttgcccaagtgagagaagcaacagcagatatc
agtgacgtgtggctgaacttagcacacatctacgtggagcagaagcagtacatcagcgcc
gttcagatgtatgagaactgcctcagaaagttctataagcaccaaaacactgaagtcgtg
ctctacctggcccgggccctcttcaagtgtggcaagttacaggagtgtaagcaaactctg
ctgaaggccagacatgtggcacccagtgatacagttctgatgtttaatgtggccttggtc
ttgcaaagattagctacctctgtcctgaaagatgaaaagagtaatctgaaggaagtcctt
aatgctgtgaaggagctggagcttgcacatagatacttcagttacttgagtaaagtagga
gataaaatgagattcgatttggcccttgctgcctctgaagccaggcagtgctctgactta
ctgagccaggcccagtaccatgtggcccgggcacgcaagcaggatgaggaagaacgggag
ctgcgcgccaagcaggagcaggagaaggagctcctgagacagaagcttctcaaggagcag
gaagagaaacgtctcagagaaaaggaagagcaaaagaaacttctggagcagcgggctcag
tatgtggagaagaccaaaaatatcctcatgttcactggcgagactgaagcaacaaaggag
aagaaaagaggtggaggtggagggcggcgttctaagaaaggaggcgagtttgaggagttt
gtcaatgacgacaccgatgacgacctccctatatccaaaaagaagaagagaaggaagggc
agtggcagtgaaccggaaggcgaagaggaggaaggtggagagaggaagaggaagaggagg
agaagacctcagaagggagaagaaggatctgacgatgatgatacagaaaatggccccaaa
ccaaagaaacgccgtccaccaagagcagagaagaagaaggctcccaagccagaacgcctg
cctccttcaatgaagggaaaaataaaatccaaagccattatatcatcgagcgacgattct
tcagatgaggataaactgaagattgctgatgaaggacatcccaggaatagcaacagcgat
tccgatgatgacgagcgacccactagacgggcctcctccgagagcgagtcagatgacaac
cagaacaagtctggcagcgaggcaggcagccctccaaggtcgggaagacaggagtcggag
gaggattccgacagtgaccagccatccagaaagagaagacgctcgggctctgagcagtcg
gacaatgagtctgtgcagtctgggagaagcccctccggaggctcggaaaacgattctcgc
ccagcttctccaagtgcagagtcagaccgggaatcggagcagggatccgataacgagggt
tctggccaaggctctgggaatgaatcggaaccagagggctccaacaatgaggcctcagac
cgagcctcggaacgtggatcagatgatagtgactag
DBGET
integrated database retrieval system
