Peromyscus leucopus (white-footed mouse): 114697673
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Entry
114697673 CDS
T07241
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 2-binding protein 1-like
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114697673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pleu03032
]
114697673
03400 DNA repair and recombination proteins [BR:
pleu03400
]
114697673
DNA replication proteins [BR:
pleu03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
114697673
DNA repair and recombination proteins [BR:
pleu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
114697673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
114697673
NCBI-ProteinID:
XP_037065546
LinkDB
All DBs
Position
12:11005362..11010587
Genome browser
AA seq
1502 aa
AA seq
DB search
MSRNDQEPFFVKFLKSSNNSECFFKALESIKELQSEDYLQIITEEEALTIKENDRSLYIC
DHFSGAVFDHLKQLGCRIVGPQVVTFCMHHRQCVPRAEHPVYNMTMSNITVSCTSPDRDK
REEVHKYVQMMGGXVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQ
EKKITKYTDINMEDFKCPIFLGCIICVTGLNGVHRKTVQQLTAKHGSQYMGQLKMNECTH
LIVQEPKGQKYECAKRWNVHCVTLQWFHDSIEKSFCQDESIYKAGPRAEVKTVPDTSTPT
AQSNAAAESRTLADVSHISNINGSCVNETMFGSTTSKLECTLENLENLDISVFQAPEDLL
DGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYEDDLRQFWSKSSHRP
HVVGAKWLLECFSKGYILPEEPYSHTNYQPAEIPVSDQPAHQTVVLEKSSTFSKKDFAPN
EKLLQADEDLLARYVNNDSTVVEVIEPEVGPYSDSTQVEPCDDSTHISVQAEDQSSVSHC
LLDGSAVPEEGLFSQKSFLVLGFSIENECNIVKIIREHAGKIVSLPSRIVADYAVVPLLG
CAVEAAVGDVVTNTWLVTCIEYQTLVDPKSNPLFTPVSVMSGMTPLKDCVISFSQCVGAE
RDSLVFLASHLGASVQEFFVRKSSAKKGMLASTHLIVKEPIGSKYEAAKKWSLPAVTIAW
LLETARMGKRADESHFLVDSAPKQEQVLETKLPNVMNPNPDSPGHPDTHLEMHRKMAVTP
LDMNRFQSKAFQAVISQHCKQDSVSSVLKKPLKKEPSLHLDTPSKFLSKDKLFKPSFDVT
DALAALETPRAATQKRKLSSPLSEVIVRNLKVALAKSSRNTSTLSASPQPKGDDHLEEVE
TPQPLDKVVVCVSKKLSKKQXELNGVAASLGAEYRWSFDESVTHFIYQGRTNDSNREYKS
AKERGVHIVSEHWLLECAQEYKHLPESLYPHTYNPKMSLDISTVQGGRLCTSWVPSAVSA
SKDDEPDHLSVEENETNSVATNNEESALLNGRNDCKGVLTQTLETRENFQKQLQEIMSAT
CIVKTQAQKTSLSRSSCNSASSTPDSARSARSGRSRVLEALRQSXTEPSQNEQIIWDDPT
AREERARLASNLQWPSYPTQYSELQVDMKKLDDSPPREPVDHSEIAEQASCVTEAPEHPV
SEEPETPAADRRHLFPGPEPPSIAFPLPKPPGPPQPADKIETMEESQEKLKKQYVFQMSS
LNSQERIDYCHLIKKLAXSVIEKQCSDPNCTHMVVGYPLRNEKYLASMAAGKWVLHRSYL
EACRTAGCFVQEEDYEWGSSSILDALTDVTEHQQKLALAAMRWRKRIQQRQESGIVEGAF
SGWKVILRVDRPQEAGFKRLLQAGGAEVLPGHPVPLFNEATHLFCDFNKLKPDDCRVFMA
EAAAQNMACLKTEYIADYLMLESPPCADNYRLSEAALLQNKECGPGLSQKRRAPAKNVIK
RS
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaatgaccaagaaccgttttttgtgaagtttttaaagtcttcaaacaattca
gaatgtttttttaaagctcttgagtcaataaaggaattacaatcagaagattatcttcag
attattacagaagaagaagcattgacgataaaggagaatgacaggtcactttatatctgt
gaccatttcagtggggctgtttttgatcaccttaaacagcttggctgcagaattgttggt
cctcaagtagtcacattttgtatgcaccaccggcagtgtgtcccaagagctgagcatcca
gtttacaatatgactatgtccaatataactgtctcttgtacaagcccggatagagacaaa
agggaagaagttcataaatatgtacagatgatgggtggatgagtgtacagagaccttaat
gtgtcagtcactcacctcattgcaggagaagttgggagcaaaaaatatctagttgctgct
aatctgaagaaacccattttgcttccttcttggataaaaacactttgggagaagtcacaa
gagaagaaaataaccaaatacactgacataaacatggaagactttaagtgtcctattttt
cttggttgtattatctgtgtgactggcttaaatggtgtacacagaaagacagttcagcaa
ctcacagctaagcatggaagccagtacatggggcagctgaagatgaatgagtgtacacac
ctcatcgtgcaggaaccgaaaggacaaaaatatgaatgtgccaaaagatggaatgtgcac
tgtgtgaccctgcagtggtttcatgacagtattgagaaaagcttttgtcaagatgaatct
atatacaaggctggacccagagcagaagtaaagacagtgcctgatacttcaactcccact
gctcagagtaatgcagcagccgaaagtcgtactctggcagatgtcagccatatatccaac
ataaatggcagctgtgtaaatgaaacaatgtttggttcaactactagcaaacttgaatgt
acacttgaaaacttagaaaatctggacatcagtgtgtttcaagcacctgaggatttgcta
gatggctgtcggatatacctctgtggttttagtggcagaaagctagataagctgagaagg
cttattaacagtggcggtggagttcgatttaatcaacttaatgaagatgtaactcatgta
attgtgggagattatgaggatgacctgaggcagttttggagcaaatcatcccacaggccg
cacgtagtgggagcaaagtggttgctggagtgttttagcaagggatatatactccccgaa
gagccgtatagccacactaactaccagccagctgagattccggtttcagatcagcccgca
caccagacagttgtcttagaaaagagcagcacattctctaagaaagattttgctcctaat
gagaagctcctgcaagctgatgaggatctgctcgctcgatatgtaaataatgactccaca
gtagttgaagttatagagcctgaagttgggccttacagtgattctactcaagttgagccc
tgtgatgactccactcacatttctgtgcaagcggaagaccaatcttcagtcagccattgc
ctccttgatggctctgcagttcctgaggaaggcttatttagccaaaagagcttcttggtt
ttgggttttagtattgaaaatgaatgtaacattgtaaagatcataagagaacatgctgga
aagattgtgtcccttcccagcagaattgttgctgactatgctgtggttccgctgctgggg
tgtgcagtagaagcagctgtgggagacgttgttacaaacacatggctggttacgtgtata
gagtaccagacactagttgatcccaagtcgaatcccctcttcacaccagtgtcggtaatg
tcgggaatgactcctttaaaggactgtgtgatttctttcagtcagtgtgttggagcagaa
agagattccttggtattcttagcaagtcatcttggagcaagtgttcaagaattctttgtt
cgcaaatccagcgcaaagaaaggcatgctcgccagtacacatcttatagtgaaagaaccg
attggttctaaatacgaagctgcaaagaagtggagtttgccggcagtcactattgcatgg
ctcttagaaactgctagaatggggaagagagcggatgaaagccattttctggttgacagt
gcacctaaacaagaacaagtattagaaactaagctaccaaatgtaatgaatccaaatcca
gactctccaggacatcccgacacacatctagaaatgcacagaaaaatggctgttacacct
ttggacatgaaccgctttcagagtaaagctttccaggctgttatatctcagcactgtaag
caggactcagtctcttcagtacttaaaaagccacttaagaaggaaccctccttacacctg
gacacaccatcaaagtttctgtctaaggacaaacttttcaagccatcttttgatgtgacg
gatgcacttgcagccttggagaccccaagagctgccacccagaagaggaaactgagttca
ccactctctgaagtcatcgtcagaaacttgaaagttgccttggcaaaaagttcccgaaac
accagcactctttctgccagccctcagccaaagggtgacgaccatttggaggaggtagag
actccacagccacttgacaaagttgtggtgtgtgtgagtaaaaagctcagtaagaaacag
nntgaactaaatggggtcgcagcctcactgggagcagagtataggtggagttttgatgag
tcagtgactcatttcatttatcagggtcggacaaatgatagtaatcgagaatataaatct
gcaaaagaaagaggggtgcatattgtttccgagcattggcttttagagtgtgctcaagag
tataagcatcttcctgaatctctgtatccacacacttacaatcccaaaatgagcctggac
atcagtacggtgcaaggtggccggctctgtactagctgggtaccctcagcagtctctgct
tccaaggacgatgagccagatcatttgtctgtagaagaaaatgagacaaacagcgtggcc
acgaataacgaagaatcggcactgttgaatggaagaaatgactgtaaaggagttctgaca
cagaccttggagacgagagaaaacttccagaagcagttgcaagagatcatgtcagcaacc
tgcatcgtgaagacgcaggcgcagaagactagcctgtccagaagcagttgtaacagtgct
tcttcaactcctgacagtgctcgctctgctcggagtggccggagtcgagtcctggaggca
ctcaggcagtctncgacagagccctcccagaacgagcagattatttgggatgacccgaca
gcaagggaggagagagcaaggctggccagcaacttgcagtggcctagctaccccacacag
tattctgagcttcaggttgacatgaaaaaactggatgattctcctcctcgagagcctgtg
gaccattcagaaattgctgagcaggcctcgtgtgtgactgaagctccagaacacccagtg
tctgaagaaccagaaactccagcagcagataggcggcatctcttccccgggcctgagccc
cccagcattgcttttcccctgcccaagccacctgggcctccacagcctgcagacaagatt
gaaacaatggaggagagtcaagaaaaacttaaaaaacagtatgtattccagatgtcatca
ctgaattctcaagagaggattgattactgtcacctgattaaaaaactagctntgtcagtg
attgagaagcagtgctcagaccccaactgcacacatatggttgtggggtacccattgcgc
aatgagaagtacttggcctccatggcagctggcaagtgggtgcttcatcgctcctacctg
gaagcttgcaggacagctggatgctttgtgcaggaagaagactatgaatggggaagtagc
tccatacttgatgctctcacagatgtcactgagcaccagcaaaaactagcacttgcagca
atgaggtggaggaaaagaatccagcagagacaagaatcaggcattgttgagggagcattt
agtggctggaaggttattttacgtgttgatcggccccaagaagccgggtttaagcgtctt
cttcaggcaggaggagcagaggtgctacctggtcatccagtccctttatttaatgaggcc
acacatcttttttgtgacttcaataaactgaagcctgatgactgcagagttttcatggca
gaggctgctgcccagaacatggcctgcttgaaaacagaatatatcgcagattatctcatg
ctggaatcgcctccttgtgcagataattaccgactctcagaagctgctttactccagaat
aaagagtgtgggcctggattatcccagaagaggagggctcctgcaaagaatgtcatcaaa
aggtcttga
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integrated database retrieval system
