Peromyscus leucopus (white-footed mouse): 114698157
Help
Entry
114698157 CDS
T07241
Symbol
Npc1
Name
(RefSeq) LOW QUALITY PROTEIN: NPC intracellular cholesterol transporter 1
KO
K12385
Niemann-Pick C1 protein
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
pleu04142
Lysosome
pleu04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
114698157 (Npc1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
114698157 (Npc1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
114698157 (Npc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pleu02000
]
114698157 (Npc1)
Transporters [BR:
pleu02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
114698157 (Npc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
114698157
NCBI-ProteinID:
XP_028732518
LinkDB
All DBs
Position
19:complement(2943757..2995752)
Genome browser
AA seq
1278 aa
AA seq
DB search
MSARHPALGLLLLLLLCPAQVFSQSCVWYGECGIAVGDKRYNCKYSGPPKPLPKDGYDLV
QELCPGFFFGNVSLCCDVQQLQTLKNNLQLPLQFLSRCPSCFYNLMTLFCELTCSPHQSQ
FLNVTATEDYVDPQTQENKTNVKELEYYIGQSFSNAMYNACRDVEAPSSNEKXLGLLCGR
DASACNATNWIEYMFNKDNGQAPFTITPVFTDLSVLGMEPMRNATKGCNESVDEVTGPCS
CQDCSMVCGPKPQPPPPPLPWRIFGLDAMYVIMWFTYVAFLLVFFGGLLAVWCHRRRYFV
SEYTPIDSNIAFSVNTSDRGEASCCDPLGAAFDGCLRRMFTKWGAFCVRNPTCVIFFSLV
FIAACSSGLVFVRVTTNPVELWSAPHSRARLEKEYFDKHFGPFFRTEQLIIQAPSTSVHI
YEPYPSGSNVPFGPPLDKAILHQVLDLQIAIESITAPYGNETVTLQDICVAPLSPYNKNC
TILSVLNYFQNSHAVLDHQVGDVFYVYADYHTHFLYCVRAPASLNDTSMLHDPCLGTFGG
PVFPWLVLGGYDDQNYNNATALVITFPVSNYYNDTEKLQRAQAWEKEFIRFVENYRNPNL
SISFIAERSIEDELNRESKSDVFTIAISYAIMFLYISLALGHIQSCSRLLVDSKISLGIA
GILIVLSSVACSLGIFSYMGMPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDERLQEET
LDQQLGRILGEVAPTMFLSSFSETSAFFFGALSSMPAVHTFSLFAGMAVLIDFLLQITCF
VSLLGLDIKRQEKNRLDILCCVRGADDGRGIQASESFLFRFFKNSFAPLLMKDWLRPVVV
AVFVGVLSFSIAVVNKVEIGLDQSLSMPNDSYVIDYFKSLGQYLHSGPPVYFVLEEGHNY
TTHRGQNMVCGGMGCDNDSLVQQIFNAAELDAYTRIGFAPSSWIDDYFDWITPQSSCCRL
YNATHQFCNASVIDPTCVRCRPLTPEGKQRPQGKEFMKFLPMFLSDNPNPKCGKGGHAAY
GSAVNIIGDDTYVGATYFMTYHTVLKTSADYIDAMRKAQLVASNITETMRSKGSNYRVFP
YSVFYVFYEQYLTIIDDTIFNLSVSLGSIFLVTLVVLGCELWSAVIMCITIAMILVNMFG
VMWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTMSTKGSRVSRAEEALAHMGSSVFS
GITLTKFGGIVVLAFAKSQIFEIFYFRMYLAMVLLGATHGLIFLPVLLSYIGPSVNKARR
QTTQERYKGTERERLLNF
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcgccacccggccctcggcctgctgctgctgctgctgctgtgccctgcgcag
gtgttttcacaatcctgtgtttggtatggagagtgtggaattgcggttggagataagagg
tacaactgtaaatattctggtccaccaaaacccttaccgaaggacggatatgacttggtg
caggagctctgtccgggattcttcttcggcaacgtcagtctctgctgtgacgttcaacag
cttcagacgctgaagaacaacctgcagctgcccctgcagtttctgtccagatgcccatca
tgtttttataacctgatgaccctgttttgtgagctgacatgtagccctcaccagagtcag
tttctgaatgtgacggccactgaagactatgttgatcctcagacccaggagaacaaaaca
aacgtgaaggaattggagtactatatcggacagagcttttcgaacgcaatgtacaacgcc
tgccgtgacgtggaggccccttcaagtaacgagaagngcctgggcctcctgtgtgggaga
gacgccagtgcctgcaacgccaccaactggattgagtacatgttcaacaaggacaacggg
caggcgccgttcaccatcactcctgtttttacagatctttctgtccttgggatggagccc
atgagaaatgccaccaaaggctgcaacgagtctgtagatgaggtcacggggccatgtagc
tgccaggactgctccatggtctgtggccccaagcctcagcctccaccgcctcctctgccc
tggaggatcttcggcctggacgccatgtatgttatcatgtggttcacctacgtggcgttt
ctgctggtattctttggaggactgttggcggtgtggtgccacagaagacgctattttgtg
tctgagtacactcccattgacagcaatatcgccttctctgtgaacaccagcgacagaggg
gaggcctcatgctgtgacccactcggagcagcgttcgacggctgtctgaggcgcatgttc
acaaagtggggagctttctgtgtccgaaatcccacctgcgtcattttcttctcgttggtc
ttcatcgctgcgtgttcttctgggctggtgtttgtccgggtcaccaccaatcctgtggag
ctctggtcagcccctcacagtcgggcccgcttggagaaggagtactttgataagcacttt
gggcctttcttccgcacagagcagctcattatccaggcccccagcaccagtgttcatatc
tatgagccgtacccctcaggatccaatgtgccctttgggccgccactggacaaagcgatt
ctgcaccaggttcttgacttacagattgccattgaaagtatcactgcaccttatggcaat
gagaccgtgacactccaggacatctgtgtggcccccctctctccatacaacaagaactgc
accattctgagtgtgttaaattacttccagaacagccatgcggtgctggaccaccaagtc
ggcgatgtcttctatgtatatgccgactaccacacgcactttctatactgtgtacgggcc
cccgcctctctgaacgacacgagtatgctccatgatccttgcctgggtacatttggagga
cctgtgttcccatggcttgtgctgggtggctatgacgatcagaactacaataatgccacg
gcgcttgtgatcaccttccctgtcagcaattactataacgacacagagaagctccagagg
gcccaggcctgggagaaagagtttattaggtttgtggaaaactacaggaatcccaatctg
tccatctctttcatcgctgagcgaagcattgaagacgagctcaatcgggaaagtaagagt
gacgtgttcaccattgccatcagctacgccatcatgtttctgtacatctccctggccttg
ggacacatccagagctgcagcaggcttctggtggactctaaaatctcgctgggcatcgcg
gggatcctgatagtgctgagctcagtggcctgctccctgggcatcttcagctacatgggg
atgccactgaccctcattgtcatcgaagtcatcccattcttggtgctggctgtcggagtg
gacaacatcttcattctggtgcagacctaccagagagatgaacgtcttcaggaggagacc
ctggatcagcagctgggcaggatccttggggaagtggcccctacaatgttcctgtcgtcc
ttttctgagacctcggcgttcttctttggggcgctgtcctcgatgccggccgtccacacc
ttctctctgtttgcgggcatggcggtcctcatcgacttcctccttcagattacctgcttt
gtgagcctcttgggcttagatattaagaggcaagagaaaaaccggctagacatcctgtgc
tgtgtcagaggtgctgacgacggaagaggcatccaggcctccgagagcttcctgttccgc
ttcttcaagaactcctttgccccccttctgatgaaggactggctgcgaccagttgtggta
gctgtgtttgtgggtgttctgtcattcagcattgcagtcgtgaacaaagtagaaattgga
ttggatcagtctctctcaatgccaaatgattcctacgtgatcgattatttcaaatcactc
gggcagtacctgcactcgggtccgcctgtgtactttgtcctggaggaaggtcataactac
actacccacagagggcagaacatggtctgcggcggcatgggctgtgacaatgactccctg
gtacagcagatatttaacgcagccgagctggacgcctacacccgcataggctttgccccc
tcgtcctggattgacgattactttgactggatcacgccacagtcctcctgctgcagactc
tacaatgccactcaccagttttgcaacgcctctgtgattgacccaacctgtgtccgctgc
agacctctgactccagagggcaaacagaggcctcaagggaaagagttcatgaaattcctg
cccatgttcctttccgataaccccaaccccaagtgtggcaaagggggacatgctgcttac
ggctcggctgttaacatcatcggagatgacacttacgtgggggccacttacttcatgacc
taccacactgtacttaagacctctgctgactatattgatgccatgagaaaagcccagctt
gtagccagtaacatcacagaaaccatgagatctaaggggagtaactaccgcgtgttcccg
tacagcgtgttctacgtcttctatgaacagtacctgaccattattgacgacaccatcttt
aacctgagtgtgtctctgggctccatatttctggtgaccttggtggttctgggctgtgag
ctgtggtctgcagtcatcatgtgtatcaccatagccatgatcctggtcaacatgttcggt
gttatgtggctgtggggcatcagtctgaatgctgtttccttggtcaacttggtgatgagc
tgtggcatttctgtggagttctgcagccatataacaagagcattcacgatgagtaccaaa
gggagccgagtgagccgagcggaagaggcgctggcccacatgggtagttctgtattcagt
ggaatcacgcttacaaaatttggaggaattgtagtgttggcctttgccaaatctcaaatt
ttcgagatattttacttcaggatgtacttagccatggtcttacttggagccactcacgga
ttaatatttcttcctgtcttactcagctacataggaccgtcggtgaataaagctagaaga
caaaccactcaagagcgatacaaagggaccgagcgagaacggctcctcaacttctag
DBGET
integrated database retrieval system
