KEGG   Peromyscus leucopus (white-footed mouse): 114698334
Entry
114698334         CDS       T07241                                 
Symbol
Col4a6
Name
(RefSeq) collagen alpha-6(IV) chain
  KO
K06237  collagen type IV alpha
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Pathway
pleu04151  PI3K-Akt signaling pathway
pleu04510  Focal adhesion
pleu04512  ECM-receptor interaction
pleu04820  Cytoskeleton in muscle cells
pleu04926  Relaxin signaling pathway
pleu04933  AGE-RAGE signaling pathway in diabetic complications
pleu04974  Protein digestion and absorption
pleu05146  Amoebiasis
pleu05165  Human papillomavirus infection
pleu05200  Pathways in cancer
pleu05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    114698334 (Col4a6)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    114698334 (Col4a6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    114698334 (Col4a6)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    114698334 (Col4a6)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    114698334 (Col4a6)
  09154 Digestive system
   04974 Protein digestion and absorption
    114698334 (Col4a6)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    114698334 (Col4a6)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    114698334 (Col4a6)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    114698334 (Col4a6)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    114698334 (Col4a6)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    114698334 (Col4a6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pleu04147]
    114698334 (Col4a6)
   00536 Glycosaminoglycan binding proteins [BR:pleu00536]
    114698334 (Col4a6)
Exosome [BR:pleu04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   114698334 (Col4a6)
Glycosaminoglycan binding proteins [BR:pleu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   114698334 (Col4a6)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 114698334
NCBI-ProteinID: XP_028732811
LinkDB
Position
X:complement(94428679..94722283)
AA seq 1694 aa
MHPGLWLFLVSLCLTKELAEAGQKKSYAKPCGGQDCSGSCTCSPEKGTRGRPGPIGTQGP
AGPEGFAGPTGLSGLKGERGSPGPLGPYGSKGDKGPMGVPGFVGINGIPGHPGQPGPRGP
PGLDGCNGTHGAVGFPGPDGYPGILGPPGLPGHKGSKGESAPFQGSITGMKGDPGLPGLD
GITGPSGSPGSPGESGPIGPPGLQGPPGPPGPPGPDGNMGLGFQGEKGVKGDVGLPGPAG
PPPSTGELEFMGFPKGKKGSKGEPGPPGLPGMSGPPGFPEFGSIGEKGERGILGLPGPRG
PMGSEGIQGHPGRQGKKGTSGFPGINGFPGIKGEKGGVGLRGPDIFTDADGAVISGYPGD
PGVPGPPGLRGDEGIQGQRGPSGAPGRPSLTGLPGALGPQGFPGLKGDQGDPGRTTFGEA
GLPGRIGLPGLPGLPGLPGPSGPPNRTFETGPLPSMEPGFPGLRGERGPKGHQGLKGVKG
DSGFCACEVGAPNIGPHGEPGLPGTQGPIGLPGIKGTRGDPGSRGAPGPAGTPGLFGSRG
HTGLKGKKGEPTISRGSKLSGDKGDAGPQGTPGMAGAPGNDGIPGLPGLPGIQGDSGSGF
PGEKGSPGLPGEKGHDGPTGPPGIGLPGLPGPRGLPGDKGVDGLPGQQGLRGAQGVTLPC
IIPGSFGPSGFPGAPGSPGSKGTRGLPGIPGKPGTHGSKGGPGSPGLIHLPGLPGFPGPR
GEKGLPGFPGLPGKDGLPGKAGSPGLPGSKGATGDIFGAENGASGEQGLQGLPGDKGFPG
DSGLPGPTGLNGKSGMLGPKGEKGNPGTSGPPGQPGPSGSSDTFGIKGTSGLPGPAGLPG
ISGQSGKKGQRGDIGQPGSTGKRGLPGIKGLPGSQGTDGFLGSPGLPGVTGLPGILGQKG
EKGSPGPVGFPGLPGLPGIPGADGLKGISGSFGKVGQPGQAGTPGEKGDRGDPGSVGMSG
PRPPMLTLWFKGEKGSRGSAGSDGFLGPRGDKGEPGIPGLPGPPGAPGQSNTIKGLSGKP
GSPGSVGRSGLPGLKGSLGIAGFPGMPGKSGLQGRIGTSGPLGATGIPGLKGDQGQTLGI
SGSPGPKGQPGELGFKGVKGKDGLVGDRGYPGNKGDDGKVGIAGDPGLPGSPGLQGISGM
RGDPGLPGSPGHLGSIGHPGPSGLIGPSGFSGPPGLHGLNGLPGTKGTHGTPGASITGVP
GPAGLPGPKGEKGMPGIGIGDPGEQGSRGQKGDRGFPGLQGPAGPPGAPGISLPSVIAGQ
PGDPGRPGLDGERGRPGLPGPPGPPGPSSDQGDPGDPGFPGIPGLQGLKGNQGLPGFSGL
SGDLGLKGMKGEPGFMGTPGKVGPPGDPGFPGMKGKAGPRGSSGPQGAPGHTPISQAIQV
PPGPLGLPGIDGIPGLPGDPGLQGAVGLQGSKGLPGIPGKDGPSGLPGPPGILGDPGLPG
LQGPPGFEGAPGQQGPLGRPGRPGHSVRVGYTLVKHSQSEHVPLCPVGMSRLWTGYSLLF
VEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVG
QTQIPQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQS
LVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTVEERQQFREEPASETLKTGQL
HTRVSRCQVCMKNL
NT seq 5085 nt   +upstreamnt  +downstreamnt
atgcaccctggattgtggctgttcctggtttccttatgcctgaccaaagaactggcagaa
gcgggacagaagaagtcctatgcaaagccatgtgggggccaagactgcagtggaagctgt
acatgctctcctgagaagggaacaagagggcgccctggaccaattggaactcaaggtcca
gcaggtccagaaggatttgctggtcctactggtttatcgggtttgaaaggagaaagaggc
tccccaggccctctgggaccatatggatcaaaaggagataagggccccatgggagttcct
ggatttgttggcatcaatgggattccgggacaccctggacaaccaggtcccagaggtcca
cctggcctagatggctgtaatggaactcacggagctgttggatttccaggccctgatggc
taccctgggattttaggaccacctggtctgcctggtcacaaaggttcaaaaggagaatct
gctccttttcaaggcagcatcacaggaatgaagggggatcctgggctgcctggactggat
ggaatcactggtccatcaggatcccctggatctcctggagaatcaggacccataggacca
ccaggcttacaaggtcccccaggcccacctggacctcctggtcctgatggaaatatgggg
ttaggtttccaaggagaaaaaggagtcaagggggatgttggcctccctggccctgcagga
ccacctccatctactggggaactagaattcatgggattccccaaagggaaaaaaggctcc
aagggtgaaccagggcctccaggtctcccaggcatgagtggccctccaggtttcccggag
tttggatctattggagaaaaaggagaaaggggaatccttggtttgccaggacctaggggt
cccatgggttcagaaggaatacaaggacatccagggagacagggaaagaaggggacttca
ggttttcctggaattaatgggttcccaggaattaagggtgaaaagggtggcgttggtctg
cgaggcccagacattttcactgatgcagatggtgccgtgatctcaggttatcctggagat
cctggtgtgccaggccccccaggccttagaggagatgaaggcatccaaggccaacgtggc
ccttctggcgcccctggccgcccatcgttaacaggtcttccaggtgccctcgggcctcag
ggatttccaggcctgaaaggagaccaaggagacccaggacgcaccacctttggagaagct
ggcctgcctggcagaattggtttgccaggcttaccaggtttaccaggtctaccaggccca
tcaggcccacctaatcgcacatttgagacgggacccttgcctagcatggagcctggattc
cctggtctccgaggagaacgaggtccaaaaggacatcagggcctcaaaggagtaaaaggg
gactctgggttttgtgcttgtgaagttggtgcccccaacattggaccacatggtgaacca
ggcctgcctgggacacaaggtcccattggcctacctggtattaaagggactagaggagat
ccaggctctaggggtgcacctggcccagcagggactccagggttatttggatcgagaggt
catacaggcctcaaaggaaagaaaggagaaccaaccatcagtagaggatcaaaattgtca
ggagataaaggtgatgctggtccccaggggaccccaggtatggcaggagctccaggcaat
gatggaataccaggtttaccagggcttccaggcattcagggagacagtggatctggcttc
ccaggtgaaaaggggtcaccaggacttcctggtgaaaagggccatgatggtccaactgga
ccaccaggaattgggctgccaggacttcctgggccccgtggacttcctggagataaagga
gtagatgggttaccagggcaacaagggctccgtggagctcagggagtcaccttgccttgt
attattcctgggtcatttggtccatcaggatttcccggagctcctggatccccaggctct
aaaggaactcggggcctccctggaattccaggcaagcctggcactcatggaagcaaagga
gggcccggaagtccgggcttaattcatctcccaggactgccaggatttcctggacctcgt
ggggaaaagggattgcctggtttccctgggcttcctggaaaagatggcttgcctggaaag
gctggcagtccaggtttaccaggctccaagggagccactggtgacatctttggtgccgaa
aatggtgcttcaggggagcaaggcctacagggattgccaggggacaaaggatttcctgga
gactctggccttccaggacccacgggtttgaatgggaagtctggtatgctaggccccaaa
ggtgagaagggcaaccctggaacatcaggaccaccaggacagccaggaccctcaggatct
agtgatacatttggcatcaagggcacatctggactcccaggaccagcaggccttccaggc
atttcagggcaatctggaaagaagggtcaaagaggagacataggtcaacctgggtcaact
ggaaaacgaggtctacctgggataaaaggccttcctggttctcaagggacagatggtttc
ctgggaagcccaggtttgccaggagtcactgggttgccaggcatcctaggccaaaagggt
gaaaaggggtcccctggaccagtagggtttcccggcttacctggtcttcccggtattcct
ggagctgatggattaaaaggaatttctggttcgtttggaaaggtgggacaacctggacag
gctggtactccgggtgaaaaaggagacagaggggatccagggtcagtcggcatgtccggt
ccaagacctccaatgctgaccctttggttcaaaggagaaaaaggctctcgaggttctgct
ggatcagatggatttcttggacccagaggtgacaaaggagaacctggcatcccagggtta
ccaggcccacctggagctcctggacagtccaataccatcaaaggactcagtggcaagcca
ggttcccctggatctgtgggaagaagcggattacccggcctcaaggggtccctggggatc
gcaggtttcccaggaatgccaggaaaaagtggtttacagggtcgcattggaacttctggt
cccctgggagcaactggtatcccagggttaaaaggggaccaaggccaaacacttggcatt
tctggaagcccaggacccaagggacagcctggtgaattaggttttaaaggtgtaaaggga
aaagatggactagttggtgacagaggttacccaggaaacaagggtgacgatggaaaagtt
ggtattgctggagatcctggccttcctgggtccccaggacttcaagggatttcaggtatg
agaggagacccaggcctcccaggttcccctggccatctagggtcaattggccatcctgga
ccctctggcttaataggaccctcaggattctctggaccacctggtttacatggactgaat
ggacttccaggcaccaagggtacccatggcactccaggagccagtatcactggtgttccg
gggcctgctggcttgcctggtcccaagggggaaaagggaatgccaggaattggcattgga
gacccaggagaacaaggttcaaggggacaaaaaggtgaccgaggtttcccaggtctccaa
ggtcctgctggtccccccggagccccaggcatctctttgccctcagtcatagcaggacag
cctggtgaccctgggcggccaggcctagatggagaacgaggccgcccaggccttccagga
cctccaggtccccctggcccatcctcagaccaaggtgaccctggagaccctggcttccct
ggaattccaggccttcaagggctcaagggaaaccaaggacttccaggtttctctggcctt
tctggagatctaggactgaaaggcatgaaaggggagcctggcttcatggggactcctggc
aaggttgggccaccaggagacccaggatttcccgggatgaaggggaaggcggggccaaga
ggatcttctggcccccagggtgctccaggacacacaccaatttcccaagctatccaggtt
cctccaggacctttgggtcttccaggcattgatggcatccctggcctcccgggagaccct
gggcttcaaggtgctgtgggtctgcaaggttctaaaggtctacctggcatccctggcaag
gacggccccagtggtcttccaggcccacctggaatcctgggcgatcctggtctccctgga
ctacaaggacctccaggatttgaaggagctccagggcagcagggtcccctggggaggcct
gggaggcctgggcacagtgtgagagtgggctacacactggtcaaacacagtcagtcagaa
cacgtgcccctgtgccccgtcgggatgagccgactgtggacgggctacagcttgctgttc
gtggaggggcaggagaaagcccataaccaggacctgggatttgctggctcctgcctgccc
cgattcagcaccatgcctttcatctactgcaacatcaatgaagtgtgccactatgccaga
cgcaatgataaatcctactggctctccactactgcccccattcccatgatgcctgtgggc
cagacccagattccccagtacatcagtcgctgctctgtatgtgaggcaccctcacaagct
attgctgtgcacagccaagacatcaccattccacagtgccctctgggctggcgcagcctc
tggattggttactccttcctcatgcacactgctgctggggctgagggcggaggccagtcc
ctagtctcccctggctcctgcctggaggacttccgggccactcctttcattgagtgcaac
ggtgcccgtggtacctgccactactttgccaacaagtacagcttctggctgaccacagtg
gaggaaagacagcagtttcgagaagagcctgcttctgagacgctcaaaaccgggcagctc
cacaccagggtgagccgctgccaggtgtgtatgaaaaatctgtag

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