Peromyscus leucopus (white-footed mouse): 114698739
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Entry
114698739 CDS
T07241
Name
(RefSeq) protein Atg16l2
KO
K20868
autophagy-related protein 16-2
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114698739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pleu04131
]
114698739
03029 Mitochondrial biogenesis [BR:
pleu03029
]
114698739
Membrane trafficking [BR:
pleu04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
114698739
Others
Specific organelles associated proteins
Auto phagosome
114698739
Mitochondrial biogenesis [BR:
pleu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
114698739
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_NWD2_C
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_VPS8
Phage_scaffold
Beta-prop_ACSF4
MIF4G_like_2
Motif
Other DBs
NCBI-GeneID:
114698739
NCBI-ProteinID:
XP_028733391
LinkDB
All DBs
Position
1:103490069..103502523
Genome browser
AA seq
623 aa
AA seq
DB search
MAGPGAPGGPSAPAAVWKRHIVRQLRHRDRTQKTLFLELVPAYNHLLEKAELLAKFSEKL
KSEPEDVTSAPHQDCWGEFSGPASDRVSSAASLRMMWQQEEKELQLVCGEMAYQVVKKSA
ALDTLQSQLEERQGRLEALQACVVQLSEARAQQSRQLEELQAENAAQREAYRALLEQAAH
QEAALRRLQEEARDLLERLVQRKARAAAECNLRNERRSRANQARVSQELKRAAKRTVSIS
EIPNTLEGGTREESAPLSPVATPEFLESETCEKWKRPFRSASATSLTLSRCVDVVKGLLD
FKKRRGHSVGGAPEQRYQSIPVCVSAQIPTQAQDVLDAHLSEVNAVCFGPNSSLLATGGA
DRLIHLWNVVGGRLEANQTLEGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGETQSKE
TLSGHKDKVTAAKFKLTRHQAVTGSRDRTVKEWDLGRAYCSRTINVLSYCNDVVCGDHII
ISGHNDQKIRFWDSRGPHCIQVIPVQGRVTSLSLSHDQLHLLSCSRDNTLKVIDLRISNI
RQVFRADGFKCSSDWTKAVFSPDRGYALAGSSNGALYIWDVDTGKLESSLQGPHCAAVNA
VAWCFSGNHVVSVDQGRKVVLWH
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcgggacccggcgcccccggcggtccctccgcgcccgccgccgtctggaagcgtcac
atcgtgcgacagctgcggcatcgggaccgcacgcagaagacgctcttcctggagctcgtg
ccggcttataaccacctcctagagaaggctgaactgctagccaagttctcagagaagttg
aagtcagagccagaggatgtcacctccgccccgcatcaggactgctggggggagttctcc
gggcctgcctctgaccgggtctcctcagcagcctctctgaggatgatgtggcagcaggag
gagaaggaactgcagctggtctgcggtgagatggcctaccaggtggtgaagaagagcgca
gccctagacaccctgcagtcacagctggaggagcgccagggcaggctggaagccctgcaa
gcctgcgtggtacagctaagcgaggcgcgggcgcagcagtcccggcagctggaggaactg
caggcggagaacgcggcgcagagggaagcctaccgggcgctgctagagcaagcagcacac
caggaggccgcactgcgcaggctccaggaggaggcacgggacctgctggagcggcttgtg
cagcgtaaagcgcgtgccgctgccgagtgcaatctgcgtaatgagcgaaggagcagggcc
aaccaagcccgggtgtcccaggagctgaagagagcggctaagcggactgtgagcatcagc
gagatcccaaacactctagaaggtgggaccagggaggagtctgcgcctctgtcccctgtt
gctacacctgagttcctggagagtgagacttgtgagaaatggaaaaggcctttcaggtct
gcctcggccacctctctgacactgtcccgctgtgtggacgtggtgaaggggctgcttgac
ttcaagaagaggcgaggtcactcggtggggggtgcccctgagcagcggtaccaaagcatc
cctgtgtgtgtatctgctcagattcctacccaggctcaggacgtcttggatgcccatctc
tctgaggtcaatgctgtttgttttggccccaacagcagcctcctggccacgggaggggct
gaccggctcatccacctctggaatgtcgtgggaggtcgcctggaggccaaccagaccctc
gaaggagctggtggcagcatcaccagtgtggattttgacccctcgggctcccaggttttg
gcagctacttacaaccaggctgcccagctctggaaggtgggggagacacagtccaaggaa
accttgtctggacataaggacaaagtgacagctgccaaattcaagctaacgaggcatcag
gcagtgactgggagccgagaccggactgtgaaggaatgggacctgggccgcgcctactgt
tccaggaccatcaatgtgctttcctactgtaatgacgtggtgtgcggggaccacatcatc
atcagtggccacaatgaccagaagatccggttctgggacagcaggggcccccactgcatc
caggtcatccctgtacagggccgggttacctccctgagcctcagccacgaccagctgcat
ctgcttagctgttcccgagacaatacactcaaggtcatcgacctgcgaatcagcaatatc
cgacaggtgttcagggcggatggcttcaagtgcagttctgactggaccaaagctgtgttc
agccctgacagaggctatgcgctggcaggttcctcaaatggagccctgtacatctgggat
gtggacactgggaaactggagagcagcctacagggaccccactgtgccgctgtcaacgcc
gtggcctggtgcttctctgggaaccacgttgtgagtgtggaccaaggcaggaaggtggtg
ctctggcactag
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