Peromyscus leucopus (white-footed mouse): 114698902
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Entry
114698902 CDS
T07241
Symbol
Tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X3
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pleu03036
]
114698902 (Tdrd12)
Enzymes [BR:
pleu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
114698902 (Tdrd12)
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
114698902 (Tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
AAA_35
Motif
Other DBs
NCBI-GeneID:
114698902
NCBI-ProteinID:
XP_028733598
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Position
1:160242750..160328017
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AA seq
1278 aa
AA seq
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MLEVLVLKIEDPGCFWVIIKGCSHFLEQEVDYQKLNSAMNDFYNSMCQDIEIKPLMLEEG
QVCVVYCQELKCWCRAVIKSIISSADHYLAECFLVDFAKYIPVKSKNIRVAVESFMQLPY
RAKKFRLYCTKPVTLHIDFCEDTAEIVPATKWDSAAIQYFQNILRATTQVEAKLCAVEED
TFEVYLYATIKNEKVCVNDDLVAKNFAYYVSPMGNKNLNTFEKPRPSLHSVSCSSKLSPS
LTLWPMLLQGKDCPGPENKAVKCKDSLRDSRKIMFEKKQQCLPLKHINKCIESSVYWPTK
RGITIYADPDIPAASGFSQKPNEKPLRLTEKKDCDEKNGCVKLLQFLNPDPLRAEEISDL
QQLQKVKSGTLQPGVVLRNRIEPCLTMDKSPLSADLKKALQRNKFPGPSHTASYSWPPIA
RGCDVVVISHCGNDPLLYLPPLLTILQIGGCYKSLPSRNGPLAVIVCPGWKKAQFIFELL
GDCSMSSRPLHPVLLTIGLHKDEAKNMKLPRGCDVIVTTPHSLLRLLTYRSLLFLRLCHL
VLDEVQVLFFEANEQMFAILDNFKKNVEVEERESAPHQIVAVGVHWNRHIDHLVREFMKD
PYIVITALEEAALYGNVQQVVHLCLECEKTSTLLQVLDFVPSQAQKTLIFTCSVAETEIV
CKVVESNSIFCLKMHKEMAFNLKSILEQWKKKLSSGSHIVLTLTDDCIPLLAITDATCVV
HFSFPSSPKVFGGRLYCMSDHFQSLAEQGSPAEQGDKRTKSVLLLTERNASHAVGVLRYL
ERADAKIPSELYEFTAGVLEAKEDKKARRPLCPYLKAFGFCKDKRICPDRHHINPEMDIP
RKLSNEALPMFGHIRIIPFYISNATNYFGRIIDKHLDLYATLNAEMNEYFKDPSNKTAAE
KVESFGLYGLEEKTIFQRVQVLEVSQKEDTWGLGSVLVKFIDEGGTKLISRDQLLLLPEK
FHTLPPQAVEFIVCRVKPADSEIEWNPKVTRYIHHKIVGKLHDAKVVLALGNTLWIDPMV
HVTKLSNLKTSVIDYNVRAEILSMGMGIDNSEHVEQLKRLYKEARLPAFEDLLGQTSTPT
TVEDGMCLRGTRQGDGGTERRAASEVDSDNLKPEVLSEDTGSDSLSRTAQPHVRSFHPQI
KWFQKDDVVILKIKIRNVKDYKCKFFTDRVVFSAWVGDKFYLADMELQGDIRKDDCRCVI
KDDEPLITLAKEKRACWCGLLKQRNPNVAFDFDHWEECEEDSPFSKVVSSKNLSCKVAAL
VENSSSASSESTDGSESE
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgctggaggtcctggtgctaaagattgaagatccaggttgcttctgggtaattataaaa
ggatgtagtcattttttagaacaagaagtcgactatcaaaaactaaacagtgccatgaat
gacttctataacagcatgtgtcaagacatagaaataaagccattaatgctggaagaaggg
caggtgtgtgtggtgtactgtcaggagctgaagtgctggtgcagggctgtgattaagtcc
atcatctcttccgcagaccattacctggcagagtgtttccttgtggattttgccaagtat
attccagtaaaatctaaaaacatccgagttgcagtagaatcctttatgcagcttccttat
agagcaaaaaaattcagactttactgtacaaaacccgtgacattgcacattgacttctgt
gaagacactgctgaaattgtacctgccacaaaatgggacagtgcagctatccagtacttt
cagaatattctaagagcaactacccaagtggaggccaaactttgtgctgtggaagaagat
acctttgaggtttacctttatgcaacaataaaaaatgaaaaagtttgtgtaaatgatgat
ctggttgcaaagaactttgcttattacgtgtcgcccatggggaataaaaaccttaatact
tttgagaagcccaggcccagtctccattcggtgtcctgctccagtaagctcagcccgtca
ctcactctgtggccgatgcttctgcaaggaaaagactgtcctggaccagaaaataaagct
gtaaaatgtaaggattccttgagagactcacgtaaaattatgtttgagaagaagcagcag
tgcctccctttaaaacacataaacaagtgtattgagtcttcagtatactggccaacaaaa
agaggcataaccatatatgctgatccagatattccagcagcaagtgggtttagccagaag
ccaaatgagaagcctctgcggttgactgaaaagaaggactgtgatgagaagaacggctgt
gtgaaattactacagtttttaaatcctgatcctttgagagctgaggagatctctgacctg
cagcagttgcagaaggtgaagtctggcacactgcagcctggtgtggtactccggaacagg
attgagccctgtctgaccatggataagtcccctctgtcggcagacctgaagaaggctctt
caaagaaacaagttcccgggacccagccacactgcgtcttactcttggcctccgattgcc
cgtggctgtgatgtggtagtcatttctcactgtggaaatgaccctttgttgtacctgcca
ccgctgcttacgattttgcagatagggggctgctacaagtcattaccaagtagaaatgga
cctcttgcagtcatcgtgtgtcctgggtggaaaaaggcccagtttatttttgagttgttg
ggagactgtagcatgtcctccaggcctcttcatcctgtgttgttaacaattggacttcac
aaagatgaagccaaaaatatgaagcttccaagagggtgtgatgtgattgtcacaactcca
cacagccttttgagacttctcacataccgaagcttgttatttcttagactctgccacctg
gttctggatgaggtgcaagtattgttctttgaagctaatgagcaaatgtttgccatatta
gataactttaaaaaaaatgttgaagtggaagagcgggagtctgcaccccatcaaattgtg
gcagtgggtgttcactggaacagacacatagaccatctggtcagagagttcatgaaggat
ccctacatcgtgatcaccgccctggaggaggcagccctctacggcaatgtccagcaggta
gtgcatctgtgcctggagtgtgagaaaacatctactctgctccaagttctggactttgtt
ccaagtcaggcccagaagaccttgatcttcacctgctctgtagcggagacagaaattgtg
tgtaaggtagtagaaagcaattcaatattttgcttgaaaatgcataaagaaatggctttt
aacttaaaaagtattttagagcagtggaagaagaagttaagttctggctctcacattgta
ttaaccttaacagacgactgcataccactcctggccatcaccgatgccacatgtgtggtt
cacttcagctttccttcctcgccaaaagtgtttggtggtcgcctgtattgcatgtctgat
cattttcagagtttagctgaacagggttctccagcagagcagggagataaaagaaccaaa
tctgtcttgctgctgacggagagaaatgcaagccacgctgttggtgtcctgcgatacttg
gagcgagcagatgccaaaattccatcagagctgtatgagtttactgctggagtcctggaa
gccaaagaagataagaaggccagaagaccgctttgtccatatcttaaggcttttggattt
tgcaaagacaaaagaatctgccctgaccggcaccacattaatccagaaatggatatccca
aggaaattatccaatgaagctctgccaatgtttggacatattaggataatacctttttac
atttcaaatgcaaccaattactttggtcgtataattgataaacacttggatctttatgca
actctcaatgctgaaatgaatgaatattttaaggaccccagtaataaaacagctgctgaa
aaggtggagagttttgggttgtacggactagaagaaaaaacaattttccagagggttcag
gtgttggaggtgagccagaaggaagacacctggggtttggggagtgtcttggtgaaattc
atagatgaaggcggaaccaagctcatctcaagagaccagctgctgctgctccccgagaag
ttccacactctgccccctcaggctgtggagttcattgtttgtagggtgaaaccagctgac
agtgaaattgaatggaacccaaaggttactagatacattcatcataagattgttgggaaa
ttgcatgatgccaaagtggtactagctttgggaaataccctttggattgatccaatggtg
catgttacaaaactttcaaacctaaaaacttctgtcattgattataatgttcgagctgaa
attttatccatgggaatgggtattgataattcagaacacgtagaacaactgaaaagacta
tacaaagaagccagactgccagctttcgaggaccttctgggccagacctcaacacccacc
acggtggaagatggcatgtgtctgcggggcactcggcaaggagatggaggtacagaaaga
agagctgcttccgaggtggactcagacaacctgaagcctgaagttttatctgaggacact
ggcagtgactcccttagcagaactgcgcagccgcatgtgagaagctttcacccacagata
aagtggttccagaaagatgatgtggtcatcttaaagataaaaataaggaatgtcaaagac
tataagtgtaaattctttacagatagagtcgttttcagtgcctgggtaggagacaagttt
tacttggctgatatggaactgcaaggtgacataaggaaagatgactgcaggtgtgtaatt
aaagatgacgaacctctaatcacgcttgccaaagagaaacgggcatgctggtgtggccta
ctcaagcagaggaaccctaacgtggcgtttgacttcgaccactgggaggaatgtgaagag
gacagccccttctccaaggttgtaagttctaaaaacctgtcctgcaaagtggcagcgttg
gttgagaacagcagcagcgcctcttcagaaagtaccgacggaagtgagagtgaatga
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