Peromyscus leucopus (white-footed mouse): 114698991
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Entry
114698991 CDS
T07241
Symbol
Cstf3
Name
(RefSeq) LOW QUALITY PROTEIN: cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114698991 (Cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114698991 (Cstf3)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
114698991 (Cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
114698991
NCBI-ProteinID:
XP_028733727
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Position
4:79538841..79624864
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AA seq
718 aa
AA seq
DB search
MSGDAAAEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVH
SIYNRLLAIEDIDPTWXVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPE
KSGEIWARFLAFESNIGDLASILKVEKRRFTAFREEYEGKETALLVDRYKFMDLYPCSAS
ELKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAP
PGLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKIPNTVEEAVRII
TGGAPELVVEGNGPVESSAVLTKAVKRPNEDSDEDEEKGAVVPPVHDIYRARQQKRIR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagacgcagccgcggagcaggcagctgagtatgtaccagagaaggtgaagaaa
gcggaaaagaaattagaagaaaatccatatgaccttgatgcttggagcattctcattcga
gaggcacagaatcaacctatagacaaagcacggaagacttacgagcgccttgttgcccag
ttccccagttctggcagattctggaaactgtacattgaagcagagattaaagctaaaaat
tatgataaggttgaaaagctatttcaaagatgccttatgaaggttttgcacattgattta
tggaagtgttatctttcatacgtcagagaaaccaagggtaaactgccaagttacaaagaa
aaaatggctcaagcttatgactttgcactggataaaattggaatggaaattatgtcctat
cagatttgggtggattacatcaacttcttaaaaggcgtggaagctgtaggatcttatgca
gaaaatcagagaataactgctgtccgaagagtctatcaacgaggttgtgttaatccaatg
atcaacattgaacagctctggagagactacaacaagtatgaagagggtatcaatattcat
ttagctaaaaaaatgattgaagatcggagtagagactacatgaatgctagacgtgtagca
aaggaatatgagacagtgatgaaaggcttggaccgcaatgcgccttcagtgcctcctcag
aatactcctcaagaagctcagcaagtagacatgtggaagaagtacatccagtgggagaag
agtaaccctctccgtacagaggaccagacccttataacgaaaagagttatgtttgcttac
gagcaatgcctgcttgtgctgggccatcaccctgatatctggtacgaagctgcccagtat
ctggagcagtcaagtaagctgcttgcggaaaagggggatatgaacaatgccaaattattt
agtgatgaagctgctaatatatacgaaagagccataagcactttattaaagaagaacatg
ctcctttattttgcatatgcagattatgaagagagtcgcatgaagtatgagaaggttcat
agtatatataacagacttctggcgattgaggatattgaccccacttggtgagtatatatc
cagtatatgaaatttgcaaggagagcagaaggtatcaaatctggaagaatgatatttaaa
aaagcaagagaggatgccagaactcgccatcatgtctatgttactgcagcactaatggag
tattactgtagtaaggacaaatctgttgcctttaagatttttgaattgggactaaagaaa
tatggagacattccagaatatgtattggcttatatcgactatctctcgcacctcaatgag
gacaataatacccgagttttgtttgaacgagttttaacatctggaagccttcctcctgag
aagtctggagaaatctgggctcgatttctagcttttgaaagtaatattggtgacttagct
agtatactcaaggtggaaaaaaggcggtttacagcattcagagaagagtatgaaggcaag
gaaacagccttactggtggacagatacaagttcatggatctctatccttgttctgcaagt
gaactcaaagcactgggctataaggatgtctcccgtgctaagctagcagctataattcca
gacccagttgtagctccttctatagtgcctgtcctgaaagatgaagtggatagaaaacca
gagtaccctaagccagacactcagcagatgattccatttcagccacgacatttagcaccc
ccaggcttacaccccgtccccggtggagtgtttccagtgcctcctgcagctgtggttctg
atgaaactgctccctcctcctatctgcttccagggtccttttgtacaagtggatgaactg
atggaaattttccgaagatgcaagataccaaacactgttgaggaagctgtgaggatcatc
actggtggggccccagagctggttgtggaaggcaatggcccggtggagagtagcgctgtg
ctcaccaaggctgtcaaaagacccaacgaggactcagacgaagacgaagaaaagggggct
gtggtcccccctgttcatgacatttacagagcgcggcagcagaagcgaatacgatga
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