Peromyscus leucopus (white-footed mouse): 114699278
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Entry
114699278 CDS
T07241
Symbol
Cltc
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04142
Lysosome
pleu04144
Endocytosis
pleu04721
Synaptic vesicle cycle
pleu04961
Endocrine and other factor-regulated calcium reabsorption
pleu05016
Huntington disease
pleu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114699278 (Cltc)
04142 Lysosome
114699278 (Cltc)
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
114699278 (Cltc)
09156 Nervous system
04721 Synaptic vesicle cycle
114699278 (Cltc)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
114699278 (Cltc)
09164 Neurodegenerative disease
05016 Huntington disease
114699278 (Cltc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pleu04131
]
114699278 (Cltc)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pleu04147
]
114699278 (Cltc)
Membrane trafficking [BR:
pleu04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
114699278 (Cltc)
Exosome [BR:
pleu04147
]
Exosomal proteins
Proteins found in most exosomes
114699278 (Cltc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
114699278
NCBI-ProteinID:
XP_028734109
LinkDB
All DBs
Position
8b:complement(70154888..70219530)
Genome browser
AA seq
1683 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFG
ILLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQD
EEPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIV
NFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSV
LLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYME
VVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMM
NHPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYF
SKVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQ
EEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDK
LDASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFG
YSM
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattctgccaattcgttttcaggagcatctccagctccagaacctgggtatc
aacccagcaaacattggcttcagtactttgactatggagtcagacaaattcatctgcatt
agagagaaagtaggagagcaggcccaggtggtaatcattgatatgaatgatccgagcaat
ccaattcgaagaccaatctcagcagacagtgccatcatgaatcctgccagcaaagtgatt
gcactgaaagatgctgcaaaaactcttcagatatttaacattgaaatgaaaagtaaaatg
aaggcccataccatgactgatgatgtcaccttctggaaatggatctctttgaacacggtt
gctcttgttacggataatgcagtttatcattggagtatggaaggagagtctcagccagtg
aaaatgtttgatcgtcattctagcctcgcaggatgccagattatcaattaccgtacagat
gcaaagcagaagtggttgcttctgactggcatatctgcacagcaaaatcgtgtggttgga
gctatgcagctctattctgtagataggaaagtatctcagcctattgaaggacatgcagct
agctttgcacaatttaagatggaaggaaatgcagaagaatcaacgttattttgtttcgct
gtacggggtcaggcaggcgggaagttacatatcattgaagttggtacaccacccacaggg
aaccagccctttccaaagaaggcagtggatgttttctttcctccagaagcacaaaatgac
tttcctgttgcaatgcagataagtgaaaagcatgatgtggtgttcttgattaccaagtat
ggttatatccacctctatgatcttgagactggcacatgcatctacatgaacagaatcagt
ggagaaacgatcttcgttactgcacctcatgaagccacagctggaataataggagtcaac
agaaagggacaggttctgtcagtttgtgtggaagaagaaaacataattccttacatcacc
aacgtcctacaaaatcctgatttggctctcagaatggctgtgcggaacaacctagctggc
gctgaagaactctttgcccggaaattcaatgctcttttcgcccagggaaactactcagag
gctgcaaaggtggctgctaatgcccccaagggaatccttcgtactccagacactattcgt
cgattccagagtgtcccagctcagccaggtcagacttcacctctacttcagtactttgga
atccttttggaccagggccagctgaacaaatatgaatccttagagttgtgtagacctgta
cttcagcaaggacggaaacagcttttggagaaatggttgaaagaagataagctggaatgt
tctgaagaactgggtgatcttgtaaagtctgtggacccaacgttggcactcagtgtgtac
ctcagggccaatgtcccgaataaagtcatccagtgctttgcagagacaggtcaagtccag
aagattgttttatatgctaaaaaagttggatatactccagactggatctttctcctcaga
aatgtaatgcgcatcagtccagatcaaggacagcagtttgctcaaatgttagttcaagac
gaagagcctcttgctgatatcacacagattgtggatgtctttatggaatataatctcatc
cagcaatgtactgccttcttacttgatgctttgaagaacaatcgcccctctgaaggtcct
ttacagactcgattgcttgagatgaaccttatgcatgcacctcaggttgcagatgctatt
ctagggaatcagatgttcacccactatgaccgggctcacatcgcccagctgtgtgaaaag
gcgggcctactgcagcgtgcattagaacacttcaccgatttgtatgacataaaacgtgca
gttgttcatacccatcttcttaaccctgagtggttagtgaattactttggctccttatca
gttgaagactccctagaatgtctcagagccatgctgtctgctaatattcgtcaaaatcta
cagatatgtgttcaagtggcttctaagtatcatgaacaactatcaactcagtctctgatt
gaactctttgaatcattcaagagttttgaaggtctcttttattttctgggatccattgtt
aactttagtcaggacccagatgtgcactttaaatatatccaggcggcttgcaagactggg
cagatcaaagaagtggagagaatctgcagagaaagcaactgctatgatcctgagcgagtc
aagaattttctcaaggaagcaaaactaacagatcagctgcctctgatcattgtctgtgat
cgatttgactttgtccacgacctcgtgctgtatttatatagaaacaatcttcagaagtat
atagagatttatgtccagaaggtaaatccaagtcgactccctgtggttattggagggttg
cttgatgttgactgctctgaagatgtcattaaaaatttgattcttgtcgtgagaggtcaa
ttctctactgatgagcttgttgctgaagttgaaaagcgaaacagattgaagctgcttcta
ccttggcttgaggccagaattcatgagggctgtgaggagcctgctactcacaatgcattg
gccaaaatatacatcgacagtaataacaacccagagagatttcttcgagaaaacccctat
tatgacagtcgtgttgttggaaagtactgtgagaagagagacccacatctggcttgtgtt
gcttatgaacgtggccagtgtgatctggaactcatcaatgtttgcaatgagaattccctc
ttcaaaagtctttcccgctacctggtccgtagaaaagatccggaattgtggggtagtgtg
ctactggaaagcaatccatacagaagaccactaattgaccaggttgtacagacagccttg
tctgaaactcaggacccagaagaagtgtctgtaactgtgaaggcttttatgacagcagat
cttcctaatgaactcattgaactgctggagaaaattgtccttgataactctgtattcagt
gaacacaggaatctgcaaaacctcctcatcctcactgcaattaaggctgaccggacacgt
gttatggagtatattaaccgcctggataattacgatgctccagatattgccaacattgcc
atcagcaatgagctgtttgaagaagcatttgctattttccggaagtttgatgtcaatact
tcagcagttcaggtcttaattgaacacattggaaacctggatcgtgcgtatgagtttgct
gaacgctgcaatgagcctgctgtttggagtcaacttgccaaagctcagctgcagaaagga
atggtgaaggaagccattgattcttacatcaaagcagatgatccttcgtcctacatggaa
gttgttcaggctgccaatactagtggaaactgggaagaactggtgaagtatttgcagatg
gccagaaagaaggctcgagagtcctatgtggaaacagaattgatatttgcactggctaaa
acaaaccgccttgcagagttagaagagttcatcaatgggccaaataatgctcatattcag
caagttggtgaccgttgttatgatgaaaaaatgtatgatgctgctaagctgttgtacaat
aatgtttctaactttggacgcttggcatctactcttgttcacctcggtgaatatcaggca
gcagttgatggtgctagaaaagctaatagtactcgaacatggaaggaggtctgctttgcc
tgtgtagatgggaaagagttccgtcttgctcagatgtgtggacttcatattgtagtacat
gcagatgaattagaggaacttatcaactactatcaggatcgtggctattttgaagaactt
atcaccatgttggaggcagccttgggactagagcgagctcacatgggaatgtttactgag
ctagctattttgtattctaaattcaagccacagaaaatgagggaacacctggagttgttc
tggtcaagagtgaatattcctaaggtactgagagctgcagaacaagctcatctttgggca
gagctggtgttcctgtatgacaagtatgaagagtatgataatgccataatcaccatgatg
aatcatccaaccgatgcatggaaggaagggcagttcaaagacatcatcaccaaggtggcc
aatgtggaattgtactacagagcaatccagttctacttagaattcaagcctctgttgtta
aatgacttgctcatggtgctgtctccacgcttggatcacactcgtgcagtcaattatttc
agcaaggttaaacagctgccactggtgaaaccatatttacgctcagttcagaaccacaac
aacaaatctgtgaatgaatcactgaacaacctctttataacagaagaagattaccaggct
ctgcgaacatcaatagatgcatatgacaactttgacaatatctcacttgctcagcgtttg
gaaaaacatgaactcattgaattcagaagaattgctgcttatctcttcaaaggcaacaat
cgctggaaacagagcgtagagctgtgcaagaaagacagcctttacaaggacgcaatgcag
tatgcctctgaatctaaagatacggaattggctgaagaactcctacagtggtttttgcag
gaagaaaagagagagtgctttggagcttgtctctttacctgttacgatcttttaaggcca
gatgtcgtcctggaaactgcatggaggcacaatatcatggattttgccatgccctatttc
atccaggtcatgaaggaatatttgaccaaggttgatgcaataaaggaaaaggtggataaa
ttagatgcttcggagtcattgagaaaagaagaagagcaggctacagagacccagcccatc
gtttatggtcagccccagctgatgctcacagcaggacccagtgtggcagtccctccccag
gcaccttttggttatggttacactgcaccaccatatgggcagccacagcctggctttggg
tacagcatgtga
DBGET
integrated database retrieval system
