Peromyscus leucopus (white-footed mouse): 114699330
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Entry
114699330 CDS
T07241
Symbol
Ldb3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114699330 (Ldb3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pleu04990
]
114699330 (Ldb3)
Domain-containing proteins not elsewhere classified [BR:
pleu04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
114699330 (Ldb3)
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GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
PDZ_2
LIM_FHL2-3_N
DUF3854
Motif
Other DBs
NCBI-GeneID:
114699330
NCBI-ProteinID:
XP_028734154
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All DBs
Position
9:105084751..105151172
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AA seq
739 aa
AA seq
DB search
MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTM
THLEAQNKIKSASYNLSLTLQKSKRPLAISTAAPPIQSPLPVIPHQKDPALDTNGSLVTP
SPSPEARASPGTLEFGDTFSSSFSQTSVCTPHMEALEPVLPQGSPVAKASPEGVQGTVSP
KVLPGPSQPRQYNNPIGLYSAETLREMAQMYQMGLRGKASGAGLLGGSLPVKDLAVDSAS
PVYQAVIKNQSKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEEALRRSSTPIE
HAPVCTSQASTPLLPASAQLPAAASPIAASPTLATAAAAHAATASAAGPASSPVESPRPQ
ASAYSPAAASSPAPSADTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPASTYSPSPGANY
SPTPYTPSPAPAYTPSPAPTYTPSPAPAYTPSPAPTYTPSPAPTYSPSPAPAYTPSPAPN
YNPTPSAVHGGGPAEAASRPPWVTDDNFSQKFAPGKSTTSVSKQTLPRGAPAYNPTGPQV
TPLTRGTFQRAERFPASSRAPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKNSLADVC
FVEEQNNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFICAACKKPFGNSLF
HMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQP
FYSKKDKPLCKKHAHAINV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacagtgtgactctgacagggcccgggccctggggcttccgtctgcagggaggc
aaggacttcaatatgcccctcactatctcccggatcactccaggcagcaaggcagcccag
tcccagctcagccaaggagaccttgtggtggccattgatggggtcaacacggacaccatg
acccacctggaggcccagaacaagatcaagtctgccagctacaacctgagccttaccctg
cagaagtccaagcgtccccttgccatctccacagcagcgccccctatccagtccccactg
ccagtgatcccccaccagaaggaccctgctctggacacgaacggcagcctggtgactccc
agccccagccctgaggcgagggccagcccaggcaccctggagttcggggacacctttagc
tcctccttctcccagacctctgtctgcaccccacacatggaggccctggagcctgtcctt
cctcagggcagcccagtggccaaggccagcccagagggtgtacagggcacagtcagcccc
aaagttctgccaggccccagccaaccgagacaatataacaaccccattggcctgtactca
gcagagaccctgagggagatggctcagatgtatcagatgggcctccgagggaaggcctca
ggtgccggactcctaggagggagcctcccagtgaaagacttagccgtggacagcgcctct
ccggtgtaccaggccgtgatcaaaaaccaaagcaagccggaagacgaggctgacgagtgg
gcccgccgctcctccaacctgcagtcccgctccttccgcatcctggcccagatgacaggg
acggaatacatgcaagaccctgacgaagaggctctgcgaagatcgagcacccctattgag
catgctccagtgtgcaccagccaggcctctaccccgctgctgcctgcttctgcccagctg
cctgctgctgcctctcccattgcggcctcgccaaccctggccacagctgctgctgcccat
gctgctactgcctctgctgcaggtcctgcctcaagccctgtggagagtccgaggccacag
gcctctgcctacagccccgcggcagcctcttctccagcaccctctgccgacaccagctac
agtgagggtccagctgcccctgcacccaagccccgagtcgtaaccactgccagcatccgg
ccttctgtttaccagccagtgcctgcatctacctacagcccgtccccaggagccaattac
agtcccactccctataccccctcccctgctcctgcttataccccctcccctgcacctacc
tataccccctcccctgctcctgcttataccccctcccctgcacctacctataccccctcc
cctgctcccacctattccccttcccctgcaccagcttataccccctcccctgctccaaac
tataaccccacaccatcagcagtccacggtgggggccctgctgaggctgccagccgccca
ccctgggtgaccgatgacaacttctctcagaagtttgctcctggaaagagcaccacctct
gtcagcaagcagaccctgccccggggggctccagcctacaacccaacaggtccacaggtg
acccctctcaccaggggcaccttccagagagctgagcgcttcccagccagcagccgggct
cccctctgtgggcactgcaacaatgtcatcaggggccctttcctggtagccatgggtcgc
tcttggcatccagaagagttcaactgtgcctactgcaagaactccctggcagatgtgtgc
tttgtggaggagcagaacaatgtttactgtgaacggtgctacgagcagttttttgcccca
ctctgtgccaagtgcaacaccaagatcatgggggaagtgatgcacgctctgagacagacg
tggcataccacctgcttcatctgtgcagcctgcaagaaaccttttggaaacagcctcttc
cacatggaggatggagagccgtactgtgagaaagactacatcaatctgttcagcaccaag
tgtcacggatgtgattttcctgtggaagctggcgacaagtttattgaagccctgggccac
acctggcatgacacctgcttcatctgtgcggtctgccatgtgaatctggagggtcagcca
ttctactccaagaaagacaaaccactgtgcaagaagcatgcacatgccatcaacgtgtag
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