Peromyscus leucopus (white-footed mouse): 114699493
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Entry
114699493 CDS
T07241
Symbol
Vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04140
Autophagy - animal
pleu04148
Efferocytosis
pleu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114699493 (Vps16)
04148 Efferocytosis
114699493 (Vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114699493 (Vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pleu04131
]
114699493 (Vps16)
Membrane trafficking [BR:
pleu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
114699493 (Vps16)
Hops complex
114699493 (Vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
114699493
NCBI-ProteinID:
XP_028734398
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Position
4:106532897..106552637
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AA seq
839 aa
AA seq
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MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELKDCLVAAAPYGGPIALLRNCWRKEKAA
SVRPVLEIYSASGMPLASLLWKSGPVVALGWSAEEELLCVQEDGAVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAYRFTLSANVGDLKLRRMPEVPGLQSAPSCW
TTLCHDRVAHILLAVGPDLYLLDHATCSTVTPAGLAPGVSSFLQMAVSFTYRYLALFTDT
GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRMMVVGNAPESIQ
FVLDEDSYLVPELDGVRIFSRSTHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLVQAVQQCIEAAGHEHQPDMQKSLLRAASFGKCFLDRFPPDSFVR
MCQDLRVLNAIRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIKICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELDTLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYK
AKNEFAAKATEDQMRLLRLQRRLEDELGGQFLDLSLHDTVTTLILGGHNKRAEQLARDFR
IPDKRLWWLKLAALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG
PEQKVKALLLVGDVAQAADVAIEHRNETELSLVLSHCTGAADGATADKIQRARAQVQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggactgttacactgcgaattggaatccactcggggactctgccttttaccggaaatat
gaactgtacagcatggactgggacctgaaggaggaactcaaagattgcttggtggctgct
gcaccctatgggggtcccattgctctactgaggaactgttggagaaaagagaaggctgcc
agcgtgcggccagtactggagatctactctgcttctggcatgccactggccagcctgctg
tggaagagtgggcctgtggtggccctcggctggtcggctgaggaggagctgctctgtgtg
caggaagacggcgcggtgctggtttatgggcttcatggagacttccggaggcacttcagc
atgggcaatgaggtgcttcagaaccgagtcctggacgcccggatctttcacactgagttt
ggttctggggtggccatcctcacaggggcctatcgcttcaccctgagtgccaatgtgggt
gacctcaaactccgacggatgccagaggtgccaggtctgcaaagtgcaccctcatgttgg
accacactgtgccacgaccgagtagcgcacattcttctggctgtaggacctgatctttac
ctcctggatcatgccacgtgctccacagtgacgcctgctggcctagccccgggagtgagc
agcttcctacagatggctgtatccttcacgtatcgttacctggcactcttcacagacacg
ggctacatctggatggggacagcgtcactcaaggagaagctgtgtgagttcaactgcaac
atccgggcaccgccgaagcagatggtctggtgtagtcgtcctcgaagcaaggaaagggcc
gttgtggtggcctgggagaggcggatgatggtggtgggcaatgcacctgaaagcattcag
tttgtgctagatgaggactcctacttagtgcctgagcttgatggggtccgcatcttctcc
cgcagcacccatgaattcctgcatgaagtcccagtggccagtgaagagatcttcaaaatt
gcctcaatggccccgggagcactgctgttggaggcccagaaggagtatgagaaagagagc
cagaaagcagacgagtacctacgggagatccaggagctggggcagctggtccaggctgtg
cagcagtgcattgaggctgcaggacatgagcaccagccagacatgcagaagagtctgctc
agggcggcttcctttggaaagtgtttccttgacaggttcccacctgacagtttcgtgcgc
atgtgtcaggaccttcgagtgctcaatgctatcagggactaccacattgggatccctctg
acctatagccaatataagcagctcaccatccaggtgctgctggacaggcttgtgttgcgg
aggctttaccctctagctattaagatatgcgagtacctgcgccttcctgaagtacagggt
gtcagcaggatcctagcccactgggcctgctacaaggtgcagcagaaagatgtctcagat
gaggatgtggcacgggctatcaatcagaagctgggtgacacgcctggtgtgtcatattct
gacatcgctgcgagagcctacggctgtggccgcactgagctagccatcaagctgctggag
tatgagccacgatcaggggagcaggtacctcttctcctaaagatgaagaggagcaaacta
gcactgagcaaggccatcgagagtggggacactgacctggtgttcacagtgctgctgcac
ctaaagaacgaactaaatcgaggagactttttcatgacgctccggaaccaacccatggcc
ctcagtttgtatcgacagttctgtaagcaccaggagctcgacacgctgaaggacctctac
aatcaagatgacaatcaccaggagctgggcagcttccacatccgggccagctatgccgct
gaagagcggatcgaggggcgagtggcagcgctgcagacggcggctgatgccttctacaag
gccaagaatgaatttgcggccaaggccacagaggatcaaatgaggctcctgcggctgcag
cgtcgtctggaagatgagctggggggccagttcctagacctgtctctacatgacaccgtc
accactcttatcctgggaggccacaacaagcgtgcggagcagctagcacgtgattttcgc
atccctgacaaaaggctctggtggctaaagctggctgccctggcagatttggaagattgg
gaggagctggagaagttttccaagagcaagaaatcaccgattggctacctgccctttgta
gagatctgcatgaaacaacataacaagtatgaggccaagaagtacgcttcccgggtgggc
ccggagcaaaaggtcaaggctttgcttcttgttggggacgtggctcaggctgcagatgtg
gctattgagcaccggaacgaaacggagctgagcctggttttgtcccactgcactggggct
gcagatggggccacagcggacaagattcagcgggccagagcccaggtccagaagaagtga
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