Peromyscus leucopus (white-footed mouse): 114699615
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Entry
114699615 CDS
T07241
Symbol
Sema6d
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
114699615 (Sema6d)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
114699615
NCBI-ProteinID:
XP_028734577
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Position
4:100595699..100652814
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AA seq
1086 aa
AA seq
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MRFFLLCFHVLFLLVSRLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYIAGRDQVYTVNLNEIPKTEVIPSKKLTWRSRQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLNTLEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIQINGVPTVIGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED
KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR
LTAIEVDRSAGPYQNYTVIFVGSEAGVVLKVLAKTSPFSLNDSVLLEEIEAYNQAKCSAE
SEEDRKVVSLQLDKDHHALYVAFSSCVVRIPLSRCERYGSCKKSCIASRDPYCGWLSQGV
CERVTLGMLLLTEDLFASHNHSAGGFEQDTEYGNTAHLGDCHESLPTSTTPDYKIFGGPT
SDMEVSSSSVATVASSPEITSKVVDTWRPKLTSSRKFVVQDDPYTSDFTDTLSGIPKGVR
WEVQSGDSNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAESAQSC
TDSSGSFAKLNGLFDSPVKEYQQNIDSPKLYSNLLTSRKELPPNMDTKSMVMDHRGQPPE
LAALPTPESTPVLHQKTLQAMKSHSDKAHGHGASRKEHPQFFPSSPPPHSPLSHGHIPSA
IVLPNATHDYNTSFSNSNAHKAEKKLQNIDHPLTKSSSKREHRRSVDSRNTLNDLLKHLN
DPNSNPKAIMGEIHMAHQTLMLDPVGPMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDV
PTTPGVPMTSLERQRGYHKNSSQRHSISAVPKNLNSPNGVLLSRQPSMNRGGYMPTPTGA
KVDYIQGTPVSVHLQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTTSVRP
LNKYTY
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgaggttctttctgctttgcttccacgtgctgttccttctggtctccaggttacgggca
gtcagcttcccggaagacgacgagccccttaacactgttgattatcactattcaaggcaa
tatccggtttttagaggacgcccttcaggcaacgaatcgcagcataggctggactttcag
ctgatgctgaaaattcgagacacactttatattgctggcagagatcaagtctatacagtg
aacttaaatgaaatccccaaaacagaggtcataccaagcaagaagctgacgtggaggtcc
aggcaacaggatcgagaaaactgtgctatgaaaggcaagcataaagatgagtgccacaac
ttcatcaaagtatttgttccaagaaacgatgagatggtttttgtttgtggtaccaatgct
ttcaaccccatgtgtagatactataggttgaataccttagagtatgatggggaagaaatt
agtggcctggcacgatgcccatttgatgccagacaaaccaatgttgccctctttgctgat
gggaaactgtattctgccacagtggccgacttcctggctagtgatgctgtcatttataga
agcatgggtgacggatctgcccttagaacaataaaatatgattccaaatggatcaaagaa
ccacactttcttcatgccattgaatatggaaactatgtctatttcttcttcagagaaatc
gctgtggaacataataacttaggcaaggctgtgtattcccgcgtggctcgcatttgtaaa
aacgacatgggtggctcccagcgggttctggagaagcactggacttccttcctgaaggcc
aggcttaactgctctgtccccggagattcctttttctactttgatgttctgcaatccatc
acagacataatccaaatcaatggcgtccccaccgtgattggggtcttcaccacgcagctt
aacagcattcctggttctgcagtctgtgcctttagcatggacgacattgagaaagtgttc
aaagggcgattcaaagagcagaaaaccccggactctgtttggacggcagttcccgaagac
aaagtaccaaaaccaaggcctggctgttgtgccaagcatggccttgcagaagcttacaaa
acctccatcgactttccagacgagaccctgtctttcatcaaatcccatcccctgatggac
tctgctgttccccccattgctgatgagccctggttcacaaagacacgggtcaggtacagg
ttgacggccatcgaagtggaccgttcggcggggccctaccaaaactacaccgtcatcttt
gtcggctctgaagccggcgtggtgctgaaagtgttggcaaagaccagccctttctctctg
aatgacagtgtattgcttgaggagattgaagcttacaaccaagccaagtgcagcgctgag
agcgaggaggacagaaaggtcgtctcgttgcagttggacaaagatcaccatgctttgtac
gtggccttctctagctgcgttgtccgcatccccctcagtcgctgtgagcgctatggatcc
tgtaaaaagtcttgcatcgcatcgcgtgacccgtactgcggttggttaagccagggcgtt
tgtgagagagtgaccctagggatgctgctgttaaccgaagacttgtttgcttcccataac
cacagcgctggaggatttgagcaagacacagagtatggcaacacggcccacctaggggac
tgccacgaaagtttgcctacttcaactacaccagattacaaaatatttggcggtccaaca
tctgacatggaggtctcttcatcttctgttgccactgtggcaagtagcccagaaattaca
tctaaagtggttgatacctggagacctaaactgacgagctcccggaaatttgtagttcaa
gatgacccatacacttctgattttactgatactttatcaggtatcccaaagggtgtacga
tgggaagtccaatctggagactccaaccagatggtccatatgaatgtcctcatcacctgt
gtgttcgcggctttcgtcttgggcgcattcattgcaggcgtggctgtatactgctaccgc
gacatgtttgttcgcaagaacagaaagatccataaagatgcggaatcagcccagtcatgc
acagactccagcggaagctttgccaagctgaatggtctctttgacagtcccgtcaaggaa
taccaacagaacattgattctcctaaactctatagcaacctgctgaccagtcggaaggag
ctgccacccaacatggatacaaaatccatggtcatggaccaccgaggccagcctccagag
ctggctgctctccccacaccagagtccacacctgtactccaccagaagaccctgcaggcc
atgaagagccactctgacaaggcccacggccatggtgcttcaaggaaagaacatccccag
ttttttccttctagtcctccaccccattccccattaagtcacgggcacatccccagtgcc
attgttcttccaaacgccacccacgactacaatacgtcattttcaaactctaatgctcat
aaagctgaaaagaaacttcagaacatcgaccatcctcttacaaagtcgtccagtaagagg
gagcaccggcgttctgtggattccagaaacacccttaacgatctcctgaagcatctaaat
gacccaaacagtaaccccaaagccatcatgggagaaatccatatggcccatcaaaccctc
atgctggacccagtaggacctatgtctgaggtcccacccaaggtccctaaccgggaggca
tctctgtactcccctccctcaacactccccagaaatagcccaaccaagagagtagatgtc
cccaccactcctggggtcccaatgacatctctggaaagacaaaggggttatcataaaaat
tcctcccagaggcactctatatcagctgtgcctaaaaacttaaactcaccaaatggtgtt
ttgttatccagacagccgagtatgaaccgtggaggatatatgcccactcccaccggggcg
aaggtggactatattcaggggacacctgtgagtgtccatctgcagccttccctctccaga
cagagcagctacaccagtaatggcaccctccccaggacgggactaaagaggacaccatcc
ttaaaacctgatgtgccgccaaagccttcctttgttcctcagaccacgtctgtcaggcca
ctgaacaaatacacttactag
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