Peromyscus leucopus (white-footed mouse): 114699689
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Entry
114699689 CDS
T07241
Symbol
Pcdh17
Name
(RefSeq) protocadherin-17 isoform X1
KO
K16499
protocadherin delta 2
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pleu04515
]
114699689 (Pcdh17)
Cell adhesion molecules [BR:
pleu04515
]
Cadherins
Protocadherins
114699689 (Pcdh17)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
NUC153
GvpG
PepSY
Motif
Other DBs
NCBI-GeneID:
114699689
NCBI-ProteinID:
XP_028734740
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All DBs
Position
9:complement(39131695..39225505)
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AA seq
1187 aa
AA seq
DB search
MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGKDARLQPGLPPAERGGGGGRS
KSGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNAKCQLSLEVFANDKEICMIK
VEIQDINDNAPSFPSDQIEMDISENAAPGTRFPLTSAHDPDAGENGLRTYLLTRDDHGLF
ALDVKSRGDGTKFPELVIQKALDRELQNHHTLVLTALDGGEPPRSATVQINVKVIDSNDN
SPVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFSIDPK
TGLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAHCKVTVKLIDRNDNAPSIGFVSVRQG
ALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGGGGGLGVPGSVPFKLEENYDN
FYTVVTDRPLDRETQDEYNVTIVARDGGSPPLNSTKSFAVKILDENDNPPRFTKGLYVLQ
VHENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYALRSF
NYEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQVPRN
AGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDHLFEIDPSSGEIRTLHPFWEDVTPVVE
LVVKVTDHGKPTLSAVAKLIIRSVSGSLPEGVPRVNGEQHHWDMSLPLIVTLSTISIILL
AAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGKGKKKKINKNDIMLVQSEVEERNAM
NVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNLTVPQGHAGCHTSFTGQG
TNSSETPATRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADS
DQDTNKGSCCDMSVREALKMKTTSTKSQPLEQAFPTLLSFAILTLHTITTRLQSVDPLPP
EPEECINCTDECRVLGHSDRCWMPQFPAANQAENADYRTNLFVPTVEANVETETYETVNP
TGKKTFCTFGKDKREHTILIANVKPYLKAKRALSPLLQEVPSASSSPTKACIEPCASTKG
SLDGCEAKSGALAEASSSYLPNDSQYLSPSKQPRDPSFMASDQMARVFADVHSRASRESN
EMGAVLEQLDHPNRDLGRESVDAEEVVREIDKLLQDCRGNDPVAVRK
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttccatctgttgctgctttcttctgtgggcccctgccctgacactcaaaaac
ctcaactactcagtgccagaggagcaaggggccggcacggtgataggcaacataggcaag
gatgcccgactgcaacccgggcttccgccggctgagcgcggtggcggcggcgggcgaagc
aagtcgggcagctaccgggtgctggagaactccgcaccgcacctgctggacgtggacgcc
gacagcgggctcctctacactaagcagcgcatcgaccgggaatccttgtgccgccacaat
gccaagtgccagctgtccctagaggtgttcgctaacgacaaggagatctgcatgatcaag
gtagagatccaggacatcaacgacaatgctccctctttcccctcggaccagatcgagatg
gacatctcagagaacgcggcacccggcacccgcttccctcttactagcgctcacgaccct
gacgctggcgagaacgggctccgcacctatctgctcacccgagatgatcatggcctcttt
gcactggacgtcaagtcccgcggcgacggcaccaagttccctgagctggtcatccaaaaa
gccctggaccgcgagctgcagaaccaccacactctggtgctgactgccctggatggcggt
gagcctccgcgctctgccactgtgcagatcaatgtgaaggtgatcgattccaacgacaac
agtccagtcttcgaggctccctcatacttagtggaactgcccgagaacgcgcccctgggc
accgtggtcattgatctgaacgccaccgacgctgatgaaggtcccaacggggaagtactc
tattccttcagtagctatgtacccgaccgcgtgcgggagctcttctccatagatcccaaa
accgggctgatccgcgttaagggcaacttggactatgaggagaatggcatgttggagatc
gacgtgcaggccagagacctaggacctaacccaattccagcccactgcaaggtcacggtc
aagcttatcgaccgcaacgacaacgcgccgtccattggtttcgtctccgtgcgccagggg
gcgctgagcgaagccgccccgcctggcacagtcatcgccctggttcgggtcactgaccga
gactcaggcaagaatgggcagctgcagtgtagagtactgggtggaggagggactggcggt
ggaggtggcctaggggtgcccggttccgtgccctttaagcttgaagagaactatgacaac
ttctacaccgtagttactgaccgtccactggaccgcgagacacaggacgagtacaacgtg
acaatcgtggcccgggacgggggctcccctccactcaactccaccaagtcgttcgctgtc
aagattctggatgaaaatgacaacccgcctcggttcaccaaagggctgtacgttctccaa
gtacatgagaacaacattccaggagaatacctcggttcagtgctcgcccaagatcccgac
ctgggccaaaatgggaccgtgtcctattccattcttccctcgcacattggagacgtgtct
atctacacctatgtgtccgtgaaccccactaacggggccatctatgccctgcgctccttt
aactatgaacaaacgaaggcttttgaattcaaggtgctggctaaggactcgggggcgcca
gcgcacttggagagcaacgccactgtgagggtgacagtattagacgtgaatgacaacgct
ccagtgattgtgctccccactctgcagaacgacacggctgagttgcaggttccacgaaat
gctggcctgggctacctggtaagcaccgtgcgcgccctggacagcgactttggagagagc
gggcgcctcacttatgagattgtggatggcaacgacgaccacctgtttgagatcgatccg
tccagcggcgagatccgcacgctgcaccccttctgggaggatgtgacccccgtggtggag
ctggtagtgaaggtgactgatcatggcaagcccaccctgtccgcggtggccaaactcatc
attcgttcagtgagcggctctctgcctgagggggtaccgcgtgtgaatggggagcagcac
cactgggacatgtcgctgcctctcatagtgactctgagcacgatttccatcatcctccta
gcggccatgatcaccatagctgtcaagtgcaaacgggaaaacaaggagattcgcacttac
aactgccgcatcgccgagtatagccacccacagctgggcggggggaagggcaagaagaag
aaaatcaacaaaaacgatatcatgctggtgcagagcgaggtggaggagaggaacgccatg
aacgtcatgaacgtggtgagcagtccctccctggccacctcccccatgtacttcgactac
caaacccgcctgcccctcagctcgccccggtcagaggtgatgtatcttaagccagcctcc
aacaacctgactgtcccgcaggggcacgcaggctgccacaccagcttcaccggacaaggg
actaattcgagcgagacccctgccactcggatgtccataattcagacagacaattttccc
gcagagcccaattacatgggcagcaggcagcagtttgttcaaagtagctccacgtttaag
gacccagaaagagccagcctgagagacagtgggcacggggacagtgatcaggctgacagt
gaccaagacactaacaaaggctcctgctgtgacatgtctgttagggaggcactcaagatg
aaaactacttcaactaaaagtcaaccacttgaacaagcattcccgactttgctttccttt
gctatcctcaccctacacaccatcactactagacttcagtctgttgacccgcttcctcca
gaaccggaagagtgcattaattgcacagatgaatgccgagtgcttggtcattctgatagg
tgttggatgccacagttccctgcagccaatcaggctgaaaacgcagattaccgcacaaat
ctctttgtacccacagttgaagctaatgttgagactgagacttatgaaactgtgaacccc
actgggaaaaagactttttgtacatttggaaaagacaagcgagagcacactattctcatt
gccaatgtgaaaccttatttaaaagccaaacgtgccctgagccctctcctacaagaggtc
ccctcagcatctagcagccccaccaaggcatgcattgagccttgcgcctccacaaaaggc
tccctggatggctgtgaagcaaaatcaggggctcttgccgaagcgagcagttcctatctg
cccaatgacagtcagtatctgtcacccagtaagcaaccaagagacccttccttcatggct
tctgaccagatggcgagagtctttgcggatgtgcattccagagccagccgggagtccaac
gagatgggagccgtgctggagcagcttgatcaccccaacagagatctgggtagagaatcc
gtcgatgcggaagaagttgtgagagagattgataagctcttgcaggactgccggggaaat
gatcctgtagctgtgagaaagtga
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