Peromyscus leucopus (white-footed mouse): 114699852
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Entry
114699852 CDS
T07241
Symbol
Msh4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pleu03036
]
114699852 (Msh4)
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Meiosis-specific proteins
Others
114699852 (Msh4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_14
AAA_22
nSTAND3
ATPase_2
Rad17
AAA_28
AAA_23
AAA_21
AAA_19
AAA_29
Motif
Other DBs
NCBI-GeneID:
114699852
NCBI-ProteinID:
XP_028735011
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Position
6:complement(125090052..125159665)
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AA seq
764 aa
AA seq
DB search
MASIDLKSPQIVLSQFADNTTYAKVITKLKVLSPLEIIMSNTACVVGNSTKLFTLVTENF
KNVNFTTVQRKYFNETKGLEYIEQLCTAEFSSVLMEVQSRYYCLAAAAALLKYVEFIQNS
VYAPKSLKIYFQGSEQTAMIDSSSAQNLELLINNQDYRNNHTLFGVLNYTKTAGGSRRLR
SNILEPLVDVETINMRLDCVQELLQDEELFFGLQSVISRFLDTEQLLSVLVQIPKQDTVN
AAESKITNLIYLKHTLELVDPLKGTLKNCSTPLLRAYYGSLEDKRFGLILEKIKTVINDD
ARYMKGCLNMRTQKCYAVRSNISEFLDIARRTYTEIVDDIAGMISQLSEKYSLPLRTSFS
SSRGFFIQMTTDCAALSSDQLPPEFIKISKVKNSYSFTSADLIKMNERCQESLREIYHMT
YMIVCKLLSEIYEDIHCLYKLSDTVSMLDMLLSFAHACTLSDYVRPEFTDTLAIKQGWHP
ILEKISAEKPVANNTYITEGSNVLIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYAS
FRIAEQIFTRISTDDDIETNSSTFMKEMKEIAYILHNANDKSLILIDELGRGTNTEEGIG
ISYAVCEHLLSIKAFTLFTTHFLELCSIDALYLNVENMHFEVQHVKNTSRNKDAILYTYK
LSRGLTEEKNYGLKAAEASSLPPSIVLDAREITTQITRQILQSQRSSPEMDGWRVVYHLA
TRLVQAARNSQLEPDRLRTYLSNLKKKYEEDFPRAADLPERTEE
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcattgatttaaaaagcccacagattgtattgtcacagtttgcagacaacaca
acatatgcaaaggtgatcactaaactcaaagttttatcacctttggaaataataatgtca
aatactgcttgtgttgtgggaaattcaaccaaattgtttactctggtcacagaaaatttc
aagaacgttaatttcactacagtccaaaggaaatacttcaatgaaacaaagggcttagag
tacattgaacagttatgcacagctgagttcagctccgtcctcatggaagttcagtccagg
tattactgccttgcagctgctgcagccttgttaaaatatgtcgaattcattcaaaattca
gtttatgcaccaaaatcgctgaagatttatttccaaggtagtgaacagacagctatgata
gattcatcatcagcccagaaccttgagttgctcatcaataaccaggactacaggaataat
cacactctctttggtgttttaaattacactaagactgcgggagggagcagaaggctgcgc
tctaatatactggagcccctggttgatgtggaaactatcaacatgaggctggactgtgtc
caggagctgcttcaggacgaggagctcttctttggactccagtcggtcatatcaagattc
ctggatacggagcagctgctttctgttttagttcaaatcccaaagcaagacacggttaat
gcagctgaatcaaagataacaaatttgatctacctgaagcatactttggaactcgtggat
cctttaaagggcacattgaagaactgtagcacacctttgctaagagcttactacggctcc
ttggaagacaagaggtttggactaatacttgaaaagattaaaactgtgataaacgatgat
gcaaggtacatgaaaggctgcctgaacatgcggactcagaagtgctatgcagtacgctcg
aacatcagtgaattcctagacatagctaggaggacatatacagagatagtggatgacata
gcaggaatgatatcacagctttcggagaagtacagtcttccattacggaccagcttcagc
tcttcaaggggctttttcatccagatgactacagactgtgccgcgctctccagtgaccag
cttcccccagagtttatcaagatttctaaagtgaaaaactcatatagctttacatcagca
gatttaattaaaatgaatgaaagatgccaggagtctttgcgagaaatctatcacatgact
tacatgatagtgtgcaagctgcttagtgagatttatgaggacattcattgcttatacaag
ctctcagacactgtgtcaatgctggacatgctgctctcttttgctcatgcctgtaccctt
tctgactatgttcgaccagagtttactgacactttagcaattaaacaaggatggcatccc
attcttgaaaaaatatctgcagagaaacctgttgcaaacaatacatatattacagaaggg
agtaatgttctgatcataactggaccgaatatgagtggaaaatccacgtatttaaaacag
attgcactttgtcagatcatggcccagattggttcttatgttccagcagaatatgcctcc
tttaggattgctgagcagattttcacaagaatcagtactgacgatgatattgaaacaaat
tcatcaacatttatgaaagagatgaaagagatagcatatatcctgcataatgctaatgac
aagtcactcatattaattgatgagcttggtagaggcacgaatacagaagaaggcattgga
atttcttatgctgtctgtgagcatctgctgagcataaaggcatttacactgttcacgacc
catttcctggaactatgctccatagatgccctgtatcttaatgtagaaaacatgcatttt
gaagttcaacatgtaaagaatacctcaagaaataaagatgcaattttgtatacttacaaa
ctttccaggggactcacagaagaaaaaaactatggtttaaaagctgcagaggcctcctca
cttccaccatcgattgtcttggatgccagagagatcacaacacaaattacaaggcaaatt
ttgcaaagtcaaaggagttcccctgagatggatgggtggagagttgtgtatcatcttgcc
acaagacttgtccaggccgcccgaaactctcagctggaaccagacagactacggacatat
ctgagtaatctcaagaagaagtacgaagaggacttccccagggctgcagaccttccagag
aggaccgaggaataa
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