Peromyscus leucopus (white-footed mouse): 114700075
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Entry
114700075 CDS
T07241
Symbol
Smarcd3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03082
ATP-dependent chromatin remodeling
pleu04714
Thermogenesis
pleu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114700075 (Smarcd3)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
114700075 (Smarcd3)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
114700075 (Smarcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pleu03021
]
114700075 (Smarcd3)
03036 Chromosome and associated proteins [BR:
pleu03036
]
114700075 (Smarcd3)
Transcription machinery [BR:
pleu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114700075 (Smarcd3)
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114700075 (Smarcd3)
PBAF complex
114700075 (Smarcd3)
GBAF(ncBAF) complex
114700075 (Smarcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
114700075
NCBI-ProteinID:
XP_028735364
LinkDB
All DBs
Position
3:complement(61636002..61668119)
Genome browser
AA seq
495 aa
AA seq
DB search
MAADEVAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGSPYMGSPAVRPGL
APAGMEPARKRAAPPPGQSQPQGQGQPVPTAPARSRSAKRRKMADKILPQRIRELVPESQ
AYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDAEDSDGSIA
SWELRVEGKLLDDVRPGPGLSRCPGPSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHR
TPTTQETDGFQVKRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALW
QYVKTNRLQDSHDKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVD
PSDQKKTACYDIDVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDF
MLSFSRDPKGYVQDLLRSQSRDLKVMTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKIQ
QRRQELEQSLVVRNT
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggacgaagttgccggaggggcgcgcaaagccacgaaaagcaaactttttgag
tttctggtccatggggtgcgccccgggatgccgtctggagcccgaatgccccaccagggg
gcgcccatgggccccccgggctccccgtacatgggcagccccgccgtgcgacccggcctg
gcccccgcgggcatggagcccgcccgcaagcgagcagcgcccccgcccgggcagagccag
ccacagggccagggccagcctgtgcccaccgcccccgcgcggagccgcagtgccaagagg
aggaagatggctgacaaaatcctccctcaaaggattcgggagctggtccctgagtcccag
gcgtacatggacctcctagcatttgagaggaaactggatcaaaccatcatgcggaagcgg
gtggacatccaggaggccctgaagaggcccatgaagcaaaagcgaaagctgcgcctttat
atctccaatacttttaaccctgcgaagcccgatgctgaagactccgacggcagcattgcc
tcctgggagctgcgggtggaggggaagctcttggatgatgtacgtcctggcccaggtctc
tccaggtgtcctgggcccagtaagcagaagcggaagttctcttccttcttcaagagtttg
gtcattgagttggacaaagacctttatggccccgacaaccacctcgttgagtggcaccgg
acacccacaacccaggagacagatgggttccaagtgaagagaccaggggacctgagtgtg
cgctgtaccctgctccttatgctggactatcagcctccccagttcaaactggacccccga
ttagcccggctgctggggttacatacacagagccgctcagccattgtccaggcgctatgg
cagtacgtgaagaccaaccggctgcaggattcccatgacaaggagtacatcaatggagac
aagtatttccagcagatctttgactgtcctcgcctgaagttctccgagatcccccagcgc
ctcacagccctgctgctgccccctgatccgattgttatcaaccatgtcatcagcgtggac
ccatcagaccagaagaagacagcatgctatgacattgatgtggaggtagaggagccactg
aaggggcagatgagcagctttctcctgtccacggccaaccagcaggagatcagtgctctg
gacagtaagatccacgagacgatcgagtccataaaccagctcaagatccagagggacttc
atgctaagcttctccagagaccccaaaggctacgtccaagacctgctccgctctcagagc
cgagacctcaaggtgatgacggacgtggctggtaaccctgaagaggaacgccgggcagag
ttctaccaccagccctggtcccaggaagccgtcagccgctacttctactgtaagatccag
cagcgcaggcaggagctggagcaatctctggtcgtgcgcaacacctag
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