Peromyscus leucopus (white-footed mouse): 114700310
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Entry
114700310 CDS
T07241
Symbol
Atxn2l
Name
(RefSeq) LOW QUALITY PROTEIN: ataxin-2-like protein
KO
K23625
ataxin 2/2L
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu05014
Amyotrophic lateral sclerosis
pleu05017
Spinocerebellar ataxia
pleu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
114700310 (Atxn2l)
05017 Spinocerebellar ataxia
114700310 (Atxn2l)
05022 Pathways of neurodegeneration - multiple diseases
114700310 (Atxn2l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114700310 (Atxn2l)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
114700310 (Atxn2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
114700310
NCBI-ProteinID:
XP_037066590
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Position
1:78266821..78279249
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AA seq
1043 aa
AA seq
DB search
MLKPQPPQQTSQPQPPPPTQQAVARRPPGGSSPPNGGXPGPLPATTAPPGPPAAVSSCLG
PAAAAGSGLRRGAESILAAPAPPQHQERPGAVAIGSVRGQSTGKGPPQSPVFEGVYNNSR
MLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIVDT
MVFKPSDVLLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDDYD
LESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLARE
IESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLVSREGKYIPLPQRVREGPRG
GVRCSASRGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGGPSRMSPKAQRPLRGAKTL
SSPNNRPSGEASVPPTPAVGRMYPPRSPKSAAPAPVSASCPEPPIGSAVVSSASIPVTSS
VVDPGAGSISPASPKISLAPTDVKELPTKEPGRTLEAQELARIAGKVPGLQNEQKRFQLE
ELRKFGAQFKLQPSSSPETSLDPFPSRILKEEAKGKEKEVDGLLTSDPMGSPVSSKTESI
LDKEDKPSLAAVGATEGPEQLPPSCPSQTGSPPVGLIKGDDKEEGPVTEQVKKSTLNPNA
KEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYIPQIHMGPAV
QAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAAGPPLVAAT
PYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSSTPQY
PSAEQPTPQALYATVHQSYPHHATQLHGHQPQPATTPTGSQPQSQHAAPSPVQHQAGQAP
HLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHPHQQLPHGFTNMA
HVTQAHVQTGVTAAPPPHPGAPHPPQVMLLHPPQGHGGPPQGAVPPSGVPALSASTPSPY
PYIGHPQAPLPPPGELKIVLAAT
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcctcagccgccacaacagacctcgcagccccagccgccgccccccacgcaa
caggccgtggcccggcggcctcccggcgggagcagccctcccaacggcggcnctccgggg
ccgctgcccgccaccacggctcccccggggcctcccgcggccgtctcctcctgcctgggg
cctgcagctgctgccgggagcgggcttcgccgcggagccgagagcatcttggcggcgcca
gcgccaccgcagcatcaggagcggccaggggccgtggctatcggcagcgtcaggggacag
agcaccggaaagggacccccacagtcacctgtatttgaaggtgtctataacaattccagg
atgctgcatttcctgacggctgtggtgggttccacttgtgacgtcaaggtgaagaatggc
accacatatgagggcattttcaagactctgagctcaaagtttgaactggcagtagacgca
gtacaccggaaagcatctgagccagcaggtgggcctcggcgggaagacattgtggacacc
atggtgtttaaaccaagtgatgttctgcttgtccacttccgaaatgttgacttcaattat
gctactaaagacaagttcactgactcggccattgccatgaactctaaggtgaatggagag
cacaaggagaaggtgctgcagcgttgggagggcggcgacagcaacagcgatgactacgat
ctggaatccgatatgtccaatggatgggatcccaatgagatgttcaaatttaatgaggag
aactatggagtgaagaccacctatgacagcagtctgtcttcttacacggttcccttggaa
aaggacaactcagaagagtttcggcagcgggagctccgtgcagcccagttggctcgagag
attgagtcgagtccccagtaccgcctgcggattgccatggaaaatgatgatgggcgaaca
gaggaagagaagcacagtgcagttcagcggcagggttctgggcgggagagccccagcttg
gtgtccagggaggggaagtatatccctctgcctcagcgagttcgggaaggtccccgggga
ggagtccgatgcagcgcttctcgaggaggacggcctggccttagctctttgccacctcgt
ggccctcaccaccttgataacagcagccccggccctgggtctgaggcacgtggtatcaat
ggaggcccttcccgaatgtcccccaaggcacagcggcctctgagaggtgccaagacttta
tcttcgcccaacaataggccttctggagaagcttccgttcctccaacacctgcagtgggc
cggatgtaccctccacggtctcccaagtctgctgcccccgccccagtctcggcttcctgt
cccgagcctcccattggctcagcagtagtgtcctctgcctccatccctgtgacatcatca
gttgtggatcctggagcaggctctatttccccagcgtctcccaaaatttccctggccccc
acagatgtaaaagaactcccgaccaaggagcccggtaggactttggaggcccaagagctg
gcccggatagctgggaaagtccctgggcttcagaatgaacaaaaacgatttcagttggaa
gaactgaggaagtttggggcccagtttaagcttcaacctagtagctcccctgagaccagc
ctggatccatttccttcccggatcttaaaagaagaggccaaaggaaaggagaaggaggtg
gatggcctattgacttcagatcccatgggatccccagtctcctccaagacagaatccata
ttggataaggaagataaaccctccctggcagcagtaggggccactgaggggccagagcag
ctcccgccatcttgccccagccaaactggcagtcccccagtgggcctcatcaagggagat
gacaaggaggagggccctgtgactgaacaagtaaagaagtctactttgaaccccaatgcc
aaggagttcaatccaacaaagcctctgctgtctgtgaacaaatctaccagtactcccact
tccccagggccccgtactcactcaacaccttccataccggtgctgaccgcaggccagagc
gggctctacagtccccagtacatctcatatatacctcagatccacatgggaccagctgtg
caggcacctcagatgtatccatatcctgtatccaattcggtgcctgggcagcagggcaag
taccggggtgcaaaaggctcgcttcccccccagcgctcagaccaacaccagccagcctca
gcccctccgatgatgcaggctgccgctgctgctgctggcccacccctggtggctgccaca
ccttattcctcctacatcccctacaacccacagcagttcccaggccagcctgccatgatg
cagcccatggcacactacccttcacagccggtgtttgcccctatgcttcaaagtaaccca
cgaatgttgacatcgggaagccacccccaggccattgtgtcatcctctactcctcagtac
ccctctgcagagcagcctaccccccaagccctctatgccactgttcaccagtcgtaccca
caccacgccacgcagctccatggccaccagccgcagccggccaccacgcctactgggagc
cagccgcagtcccagcatgcggcccccagtcctgttcagcaccaggcggggcaggcccca
cacctgggcagtggacagccacagcagaatctgtaccatccaggggccctaacaggcacg
ccgccttctctaccaccgggaccttctgcccagtcccctcagagcagctttccccagcca
gctgctgtgtatgccatccatccccaccagcagctgccccacggcttcaccaacatggcc
catgttacccaggcccatgtccaaactggagtcacagcagccccgcccccacaccccggg
gcaccccacccgccccaggtgatgctgctgcaccccccccagggccatggggggcccccc
caaggcgcggtgcccccgagtggggtgcctgcactctcagcttccacaccctcaccctac
ccctacatcggacacccccaagctccccttccaccccccggggaactgaagattgtcctg
gccgcgacctga
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