Peromyscus leucopus (white-footed mouse): 114701304
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Entry
114701304 CDS
T07241
Symbol
Hdac6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04613
Neutrophil extracellular trap formation
pleu05014
Amyotrophic lateral sclerosis
pleu05034
Alcoholism
pleu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
114701304 (Hdac6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
114701304 (Hdac6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
114701304 (Hdac6)
09165 Substance dependence
05034 Alcoholism
114701304 (Hdac6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pleu01009
]
114701304 (Hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114701304 (Hdac6)
04131 Membrane trafficking [BR:
pleu04131
]
114701304 (Hdac6)
03036 Chromosome and associated proteins [BR:
pleu03036
]
114701304 (Hdac6)
Enzymes [BR:
pleu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
114701304 (Hdac6)
Protein phosphatases and associated proteins [BR:
pleu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114701304 (Hdac6)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
114701304 (Hdac6)
Membrane trafficking [BR:
pleu04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
114701304 (Hdac6)
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
114701304 (Hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
114701304
NCBI-ProteinID:
XP_028737212
LinkDB
All DBs
Position
X:16244883..16268991
Genome browser
AA seq
1200 aa
AA seq
DB search
MEKKASGARGHTGRREFGGANQGRSLRKGQRSMSRGSRARGEGSSAMTSTGQDSSTRQRR
GRHNPQSPPQDSSATLKRGVKKGTAPHSSPNLAEVKKKGKMKKLSQAVEEDLIAGLQELD
LNPETRVLVGTGLVFDEQLNDFHCLWDDSFPECPERLHAIKEQLILESLLDRCVSFQARF
AEKEELMLVHSLEYIDLMETTQYMNEGELRILAGTYDSVYLHPNSYSCACLATGSVLRLV
DAVLAAEIRNGMAVIRPPGHHAQRSLMDGYCMFNHVAVAARYAQKKHRIQRVLIVDWDVH
HGQGTQFIFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMR
DADYIAAFLNILLPVAFEFQPQLVLVAAGFDALQGDPKGEMATTPPGFAHLTHLLMGLAG
GKLILSLEGGYNLHALAKGVSASLHSLLGDPCPMLEFPSAPCASARTSISCTLEALEPFW
EILAGSVEPQEEDEVEEDRAEEEDEERRWETAALPLDAWPALQERTGLVYDEKMMSHCNL
WDNHHPETPQRILRIMCHLEELGLASRCLILPVRPAMDAELLTCHSAEYVERIRATEKMK
TRELHREGASFDSIYICPSTFSCAQLAAGAACRLVEAVLSGEVLNGIAIVRPPGHHAEPD
AACGFCFFNSVAVAARHAQAIAGRALRILIVDWDVHHGNGTQHMFEDDPSVLYVSLHRYD
RGTFFPMGDEGASSQVGRAAGLGFTVNVPWNGPRMGDADYLMTWYRLVLPIAYEFNPELV
LVSAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLANGRIILVLEGGYNLASISESMAACT
HSLLGDPPPPLTLLRPPQPGALASITETIQVHRKYWRSLRLMKMEDGEECSSSKPFIKKP
PKMTNPVSAKGTASPKGKVPEAGLRKTTSALSAKECTPGHTKSKSAKAVLVQGQSPEQAA
SAAPPDQATSKETEGGATMDQHASAATTDVPNQTASEEAVGDETEPVGSPLASGAADKES
TEASPVQGAAAEQSPEQLTGSLSSLELSSGAQEAPESEEGLLGEAAGGQSMNSLMLTQAF
GNFNGQDVFYAVTPLSWCPHLTAVCPIPAEGLDVAQPCETCGTVQENWVCLTCYQVYCSR
YVNSHMVHHHEASQHPLVLSCVDLSTWCYHCQAYVHHQDLQEVKSAAHQNKFGEDIPHSH
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaggcatcaggtgcccggggccacacaggtcgccgggaatttggcggtgct
aaccaagggcggagtttgagaaaggggcagcgctcaatgagtagagggagccgtgccagg
ggtgaaggctcttcagccatgacctccaccggccaagattcttctaccaggcagcgaagg
ggtaggcacaatccccagtcgccccctcaagactccagcgccaccttgaagcgaggtgtt
aagaagggtactgcaccccactccagccccaatctagcagaggtaaagaaaaaaggcaaa
atgaagaagctcagtcaagcagttgaagaagacctgatcgcggggctccaagagctggat
ctgaaccccgagacaagagtattggttggtactggattggtgtttgatgagcagctaaat
gacttccactgcctttgggatgacagtttccctgaatgccctgagcggctccatgccatc
aaggagcagctgattctggagagcctcctggaccgttgtgtgtcttttcaggcccggttt
gctgagaaggaggagctgatgttggttcacagcctggaatacattgatctgatggaaaca
acccagtacatgaatgaaggagaacttcgcatactagcaggcacctatgattcagtctat
ctgcatccgaactcctattcatgtgcctgcctggccacaggctctgtcctcaggctggta
gatgcggtcctggcggctgagattcggaatggcatggccgtcatcaggcctcctggacac
cacgcccagcgcagtcttatggatgggtattgcatgttcaaccatgtggctgtggccgcc
cgctacgctcaaaagaagcaccgcattcagagggttcttattgtggattgggatgtgcac
catggtcaaggaacacagttcatcttcgaccaggaccccagtgtcctctatttctccatc
caccgatatgagcagggtcggttctggccccaccttaaggcttctaactggtccactaca
ggttttggccaaggccaaggctataccatcaatgtaccttggaaccaggtggggatgcgg
gatgctgactacattgctgctttcctgaacatcctgctgccagttgcctttgagtttcag
cctcagctggtcctggtggctgctggatttgatgccctccaaggagaccccaagggagag
atggccaccactccaccaggctttgcccacctaacgcatttgctcatgggtctggcagga
ggcaagttgattctgtctctggagggtggctataacctccatgccctggctaagggtgtc
agtgcgtcactccacagtcttcttggagacccttgccccatgctggagttccctagtgca
ccgtgtgcaagtgcccggacttctatctcctgcactctagaagcccttgagcccttctgg
gagatccttgcgggatcagtcgagccccaggaggaagatgaagtagaggaagacagggcc
gaagaggaagatgaggaacgccgctgggagactgctgcactgccactggatgcatggcca
gcgctgcaggagcgcactgggctggtctatgacgagaaaatgatgagccactgcaacctg
tgggacaatcatcatcctgagacacctcagcgcatcttgcggatcatgtgccacctagag
gagctgggccttgcatcacgctgcctcatcctgcctgtgcggcctgccatggatgctgag
cttcttacctgccacagcgccgagtacgtcgagcgcatccgggccacagaaaagatgaaa
acccgggagctgcaccgcgaaggcgccagctttgactccatctacatctgccccagcact
tttagctgtgcgcagcttgccgcaggcgccgcctgccgcctggtggaagctgtgctttca
ggagaggttttgaacggcattgccatagtgcgccctccaggacaccatgcagaaccagat
gctgcctgtgggttctgctttttcaactctgtggctgtggctgctcgccatgcccaagcc
attgctggacgtgccctgcggatcctgatcgtggattgggatgttcatcatggtaatgga
actcagcacatgtttgaagatgaccccagtgtgttatatgtgtccctgcaccggtacgac
cgtggtactttcttccccatgggggacgagggtgccagtagccaagtaggccgagctgcc
ggtctaggcttcactgtcaatgtgccctggaatgggccccgcatgggtgacgctgactac
ctgatgacttggtatcgtctggtacttcccatcgcctatgagtttaacccagaactggtg
ctggtttcagctggctttgatgctgcacaaggggacccgctgggtggctgccaagtgaca
cctgagggttatgcccaccttactcacctgctgatgggcctcgccaatggccgcattatc
cttgtcctagagggtggatacaacttggcatccatctctgaatctatggctgcctgcacc
cattccctccttggagacccaccacccccgcttaccttgctgcgacccccacagccagga
gccctggcctcaatcactgagaccatccaagtccatcgcaaatactggcgcagtttgcgg
ctgatgaagatggaagacggggaagaatgctccagttctaagcctttcatcaagaagccg
cccaaaatgaccaatcctgtgtcagctaagggaacagcctcaccaaaaggaaaggttcca
gaagcaggcctaaggaagactacatccgcgttatctgcaaaagaatgtactccaggccac
actaaatcaaagtcagccaaggcagtgcttgttcagggccagtccccagaacaggctgct
agtgcagctccaccggaccaggccacctcgaaggagaccgagggaggagccacaatggac
cagcatgcctcagcagcaaccacagatgtacctaaccagaccgcctcggaggaggctgtg
ggagacgagactgagccagttggaagccctctagcctcgggtgcagcagacaaagagagc
acagaggcttcccctgtgcagggagccgcagccgagcagtcccctgagcagctgacgggg
agtctgagcagtttggagctaagcagtggcgctcaggaggcccctgagtctgaggagggc
ctactaggagaagccgctggaggtcagagcatgaacagcttgatgctgacacaggcattt
gggaactttaatggccaggatgtattttatgctgtgaccccactatcctggtgtccccat
ttgacggcagtgtgccccattcctgcagaaggcttagatgtggcccaaccatgtgagacc
tgtggaacagtccaggagaactgggtgtgtctgacttgctatcaggtgtactgcagtcgt
tacgtcaattcccatatggtccaccaccatgaagcttcgcaacacccactagtcctgagc
tgcgtcgacctgtccacctggtgttaccactgtcaggcttatgtccaccaccaggatctc
caagaagtgaagagcgctgcccaccagaacaagtttggggaggacataccccactcacac
taa
DBGET
integrated database retrieval system
