Peromyscus leucopus (white-footed mouse): 114701515
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Entry
114701515 CDS
T07241
Symbol
Thoc2
Name
(RefSeq) THO complex subunit 2 isoform X2
KO
K12879
THO complex subunit 2
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03013
Nucleocytoplasmic transport
pleu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114701515 (Thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
114701515 (Thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114701515 (Thoc2)
03041 Spliceosome [BR:
pleu03041
]
114701515 (Thoc2)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
114701515 (Thoc2)
Spliceosome [BR:
pleu03041
]
Complex C
Other components
EJC/TREX
114701515 (Thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114701515 (Thoc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
114701515
NCBI-ProteinID:
XP_028737445
LinkDB
All DBs
Position
X:complement(107929876..108050745)
Genome browser
AA seq
1619 aa
AA seq
DB search
MAAAAVVVPAEWIKNWEKSGRGEFLHLCRILSENKSHDSSTYRDFQQALYELSYHVIKGN
LKHEQASSVLNDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPSGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNSIMDEYK
REIVEAKQIVRKLTMVVLSTEKLDERDKEKDKDDEKVEKPPDNQKLGLLEALLKIGDWQH
AQNIMDQLPPYYAASHRLIALAICKLIHITVEPLYRRVGVPKGAKGSPVSALQNKRAPKQ
VESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKERTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS
LKYLTSLNYDVLAYCIIEALANPEKEKMKHDDTTISNWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTTEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS
KQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPHTSYE
REVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV
FSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVNKICQEEKEKRPDLYALAMGYWGLLKCRKSHMIPENEFHHKDPPPRNAVASV
QNGPGGGTSSSSLGSASKSDESGTEETDKPRERSQCGTKAVNKASSTTPKGNSSNGNSGS
NSNKAVKENDKEKVKEKDKEKKEKTPSTTPEARVLGKDSKEKPKEERPNKDEKARETKER
TPKSDKEKEKFKKEEKAKDEKFKTTIPSVESKSTQEREREKEPSRERDVAKEMKSKENVK
GGEKTPVSGSLKSPVPRSDISESEREQKRRKIDTHPSPSHSSTVKVTDILPKVPLGSENY
ASSPVISIHFLQDSLIDLKESSSKLYINHTPPPLSKSKEREMDKKDLDKSRERSREREKK
DEKDRKERKRDHSNNDREVPPDITKRRKEENGTMGVSKHKSESPCESQYPNEKDKEKNKS
KSSGKEKGSSDSFKSEKMDKISSGGKKESRHDKEKIEKKEKRDSSGGKEEKKQSSDKHR
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcagcggtggtggttcccgcagagtggataaagaactgggagaaatcaggg
agaggcgaatttttgcatttatgccggattctcagtgaaaataaaagccatgacagttcg
acttacagagattttcaacaagctctctatgagttgtcataccatgtcattaaaggaaat
ttaaagcatgaacaggcatctagtgttcttaatgatattagcgaatttcgtgaggatatg
ccttctattcttgctgatgtattctgcatattagatattgagacaaattgtttagaagaa
aaaagcaagagagactattttacacaattggtattagcatgtttgtatttagtttcagac
acagttctgaaggaacgtttggacccagaaactttggagtcattagggctaatcaagcag
tcacagcagttcaatcaaaaatcagttaaaatcaagacaaaactcttttataagcagcaa
aaattcaatttattaagagaagagaatgaaggttatgccaagctgattgctgaattgggg
caagatttatctggaaatattactagcgatttaatattagaaaatatcaagtctttaata
ggatgctttaatctggatcccaatagagttttggatgtaattttagaagtgtttgaatgc
agaccagaacatgatgacttctttatatctttattagaatcttacatgagtatgtgtgaa
ccacaaacactgtgtcatattcttggattcaaattcaagttttaccaggaaccaagtggt
gagactccctcgtctttatacagagttgcagcagtgcttctgcaatttaatctcattgat
ttagacgatctttatgtacaccttcttccagctgataatagcattatggatgaatacaaa
cgagaaattgtggaagctaagcaaattgtaagaaaactcacaatggttgtattgtctact
gagaaacttgatgaacgagacaaagaaaaggacaaagatgatgaaaaagtagagaagcca
cctgacaaccaaaaacttggtttgttggaagccttgttaaagatcggtgattggcagcat
gcacagaacatcatggatcagttgcctccatactatgcagcttcacatagactaatagct
cttgctatttgcaagctcattcacataactgttgagcctctctaccgaagagttggtgtt
cctaaaggtgctaaaggctcacctgttagtgctttgcaaaacaagagagcaccaaagcag
gtagagagctttgaagacttgaggagggatgtattcaacatgttctgttaccttggtcct
cacctttctcacgatcccattttatttgcaaaagtcgtgcgcataggcaagtcatttatg
aaggagtttcagtctgatggaagcaaacaagaagataaagaaagaacggaagttatcctt
agctgtttgcttagcattactgaccaggtattacttccatctctttctttgatggactgc
aatgcttgcatgtctgaggaactatggggaatgtttaagacatttccctatcagcataga
taccgtttgtatggccagtggaagaatgaaacttataacagtcacccacttttagtaaaa
gttaaagctcaaacaatagacagagccaagtatatcatgaagcgtctaaccaaggaaaat
gtgaagccttcaggaagacaaattggcaagttgagccacagtaatccaaccattttgttt
gattatatcttgtcacaaatacagaaatatgataacttaataacacctgtagtagattca
ttgaaatacctcacttcattgaattatgatgtcttggcctattgtatcattgaagcttta
gctaatccagaaaaggagaaaatgaaacatgatgacacaaccatctctaactggcttcag
agtctggctagtttctgtggtgcagttttccgtaaatacccgattgatcttgctggtctt
cttcagtatgtagccaatcagttaaaggcaggcaaaagctttgatctattaatattgaaa
gaagtggtacaaaaaatggcaggaatcgaaattacggaggaaatgacaacagagcaatta
gaggccatgactggtggggagcagctaaaggctgagggtggttattttggccagatcaga
aacactaaaaaatcttctcagagattaaaggatgcactactcgatcatgatcttgctctt
cctctctgtttacttatggctcagcagaggaatggggtaatttttcaagagggtggagaa
aaacacttgaaacttgtgggaaagctgtatgaccagtgtcatgataccctagtacagttt
ggtgggtttttagcatccaatctaagtacagaagattatataaagcgagtgccttcaatt
gacgtgctctgtaatgaatttcatacacctcacgatgcagcattttttctgtctaggcca
atgtatgcacaccatatttcgtcaaaatacgatgaacttaaaaaatcagaaaagggaagt
aaacagcaacataaagtccataaatacattacatcatgtgagatggtgatggctcctgtc
catgaagcagtggtctccttacacgtttccaaagtctgggatgatatcagccctcagttc
tacgctacattttggtcattgacaatgtatgaccttgcagttccacataccagctatgaa
agagaagtcaataaacttaaagtccagatgaaagcgattgatgacaatcaggaaatgcct
ccaaataaaaagaaaaaagagaaggaacgctgcacagcccttcaggacaagcttcttgaa
gaagaaaagaagcagatggaacatgttcagagagttcttcagagactaaaattggaaaaa
gacaactggcttttagcaaagtcaaccaaaaatgagaccatcacaaaatttctacagctg
tgtatatttcctcgctgcattttctcagcaatagatgctgtgtactgtgctcgttttgtt
gaattggtacatcaacagaaaactccaaatttttccacacttctttgctacgaccgagta
ttttctgacataatttacacagttgcaagctgtactgaaaatgaagctagtcggtatggg
agatttctctgctgcatgttagagacggtgaccaggtggcatagtgatagagccacatat
gaaaaggaatgtggaaactatccaggattccttaccatattacgggcaactggatttgat
ggtggaaataaagctgatcaattagattatgaaaattttcgacatgttgtacataaatgg
cattacaaacttaccaaggcatcggtacattgccttgagacaggcgaatatactcacatc
aggaatatattgattgtgctaacaaaaatacttccttggtacccaaaagttttgaatctg
ggtcaggccttggaaagaagagtgaataaaatatgccaagaagaaaaagaaaagaggcca
gatctatatgcattggctatgggctactgggggctgttgaaatgtagaaagtcacacatg
atacctgaaaatgaatttcatcacaaagaccctcctccaaggaatgctgttgccagtgta
caaaatgggcctggtggtgggacttcttcatcatccctaggaagtgcatctaaatcggat
gaaagtggtactgaggagactgataaaccaagggagagatctcagtgtggtacaaaagct
gttaataaggcttctagtaccacaccaaaagggaattcaagcaatggaaatagtggctct
aacagcaacaaagctgttaaggaaaatgacaaagaaaaagtgaaagagaaagataaagag
aaaaaagaaaagactccatctacaactccagaggccagggtacttggtaaagatagtaaa
gaaaaaccaaaggaagagcggccaaataaagatgaaaaagcaagagagacaaaggaaaga
acgcctaagtctgacaaagagaaagaaaaattcaagaaggaagaaaaagctaaagatgag
aaattcaagaccaccatccccagtgttgaatcaaaatcgactcaagaaagagaaagagag
aaggagccatccagagaaagagatgtagcaaaggaaatgaagtcaaaggaaaatgttaaa
ggaggagaaaaaacaccagtttcagggtccttgaagtcacctgttcccagatcagatatc
tcggaatctgaaagggaacaaaaacgtcgcaaaattgatactcatccttctccatcacat
tcctccacagtaaaggttacagacatacttcccaaagttcctctgggttctgagaactat
gccagctcacctgtcatctccattcattttctacaggacagtctcatcgatctcaaggaa
tcttcatcaaagctctacattaatcatactcctccaccactgtccaagagtaaggagaga
gaaatggacaagaaagatttggacaagtcaagggaaagatccagagaaagagagaaaaaa
gatgaaaaggacaggaaagagcggaaaagggaccactcaaacaatgaccgtgaagtgcca
ccggacataacaaagaggcggaaagaggagaatggaacaatgggggtttcaaaacacaaa
agtgagagtccatgtgagtctcaatatccaaatgagaaagacaaagagaaaaataagtca
aaatcttcaggcaaagaaaaaggcagtagtgattcgtttaaatctgagaagatggataaa
atctcctctggtggcaaaaaggaatccaggcatgataaagaaaagatagaaaagaaagag
aaacgggatagttcaggaggaaaggaagagaagaaacagtcctctgacaagcacagataa
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integrated database retrieval system
