Peromyscus leucopus (white-footed mouse): 114701647
Help
Entry
114701647 CDS
T07241
Symbol
Smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114701647 (Smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pleu03021
]
114701647 (Smarca5)
03036 Chromosome and associated proteins [BR:
pleu03036
]
114701647 (Smarca5)
Transcription machinery [BR:
pleu03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
114701647 (Smarca5)
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
114701647 (Smarca5)
RSF complex
114701647 (Smarca5)
WICH complex
114701647 (Smarca5)
B-WICH complex
114701647 (Smarca5)
NORC complex
114701647 (Smarca5)
BRF complex
114701647 (Smarca5)
NuRF complex (fruit fly)
114701647 (Smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
114701647
NCBI-ProteinID:
XP_028737607
LinkDB
All DBs
Position
5:89666863..89704830
Genome browser
AA seq
1052 aa
AA seq
DB search
MSSAAEPPPPPPPESAPSKAAAAGAGGSSSGNKGGPEGGAAPAAPCAAGAGPADGEMEQE
VFDDASPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKM
KPGRPRVKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKL
RDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKST
LHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKF
NWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFN
SADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQ
REWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVT
NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQD
SINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTK
TVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATH
VFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYR
EKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPR
LFELLEKEILYYRKTIGYKVPRSPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQ
GFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKI
MAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLH
KLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEK
AEKKKRGPKPSTQKRKMDGAPDGRGRKKKLKL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcggccgagcctccgccgcccccgcctcccgagagcgcgccttccaaggcc
gcggccgcgggcgccggcgggagcagcagcggcaacaaaggcggccccgagggcggcgcg
gcgccggcggctccgtgtgcggcgggcgcgggccccgcggacggcgagatggagcaggaa
gtatttgatgatgcatcacctggaaagcaaaaagaaatccaagaaccagatcctacatat
gaagaaaaaatgcaaactgaccgagcaaatagatttgagtatttattaaagcagacagag
ctgtttgcacattttattcaacctgctgctcagaagactccaacctcacccttgaagatg
aaaccagggcgcccacgggtgaaaaaggatgaaaaacagaatttgctgtcagttggcgac
taccgacaccgtagaacagagcaagaggaggatgaagagcttttaacagaaagctccaaa
gcaaccaatgtctgtactcgatttgaagattctccatcatatgtaaaatggggtaaattg
agagattatcaggtccgaggtttgaattggctcatctctctgtatgaaaatggcatcaat
ggtatccttgcggatgaaatgggtttgggaaagacacttcaaacaatttctctccttggg
tacatgaaacactatagaaatattcctggtcctcacatggttttggttcccaagtctaca
ttgcacaactggatgagtgaattcaagagatgggtaccaacacttagatctgtttgcttg
ataggagataaagagcaaagagctgcatttgtcagggatgttttattaccaggagagtgg
gatgtgtgtgtcacatcttatgaaatgcttattaaagagaagtctgtgttcaaaaaattt
aactggaggtacttagttatagatgaagcccacaggataaaaaatgaaaagtctaagttg
tcagaaatagtgagggaattcaagactacaaatcgactgttgctaactgggacgcctctt
cagaacaacctgcacgagctctggtcacttctaaattttttgttgccggatgtgtttaat
tcagctgatgactttgattcctggtttgatacaaacaattgccttggggatcaaaagcta
gttgagaggcttcatatggttttgcgtccattcctccttcgtcgaattaaagctgatgtt
gaaaagagtttgcctccaaagaaagaagtaaaaatctatgtgggtcttagcaaaatgcag
agggagtggtatactcggatattaatgaaggatatagacatattaaactcagcagggaag
atggacaaaatgaggttattgaacattctgatgcagttgaggaaatgctgcaatcatccg
tatctcttcgatggagctgaacctggtccaccttacacaacagatatgcatctagttacc
aacagtggcaaaatggtggtattagacaagctgctccctaaattaaaagagcaaggttca
agagtactcattttcagtcagatgacaagggtgttagacattttggaagattattgcatg
tggagaaattatgagtactgcagattggatgggcagacaccccatgatgagagacaggac
tccatcaatgcatacaatgagccaaatagcacgaagtttgtttttatgctaagcacacgt
gctggtggtttgggcatcaatcttgcaactgctgacgtagtaattttatatgattcagat
tggaatccccaagtagatcttcaggctatggaccgagcacatagaattggacaaacgaag
actgtccgagtgtttcgctttataactgataacactgtagaagaaagaattgtagaacgt
gccgagatgaagctcagactggattcgatagtcattcaacaagggaggcttgtagatcag
aacctgaacaaaattgggaaagatgaaatgcttcaaatgattcgacacggggccacacat
gtgtttgcatcaaaagaaagtgaaatcactgatgaggatattgatggtattttggaaaga
ggtgcaaagaagactgcagagatgaatgaaaagctctccaagatgggtgaaagctcactt
agaaactttacaatggatacagagtccagtgtttataactttgaaggggaagactacaga
gagaaacagaagattgcattcacagagtggattgaaccacctaaacgagagaggaaagcc
aactatgctgttgacgcctatttcagggaagctctccgtgttagtgagccgaaagctccc
aaggcacctcgacctccaaaacaaccaaatgttcaggatttccagttctttcctccacgt
ttatttgaattgctggaaaaagaaatcctgtattacaggaaaactatcgggtacaaggtg
cctcggagtcctgacctacctaacgcagcacaggcacagaaagaagagcaacttaaaatt
gatgaagcggagcccctgaatgatgaggagctggaggagaaggagaagcttctaacccag
gggtttactaattggaataagagagattttaaccagtttatcaaagcgaatgagaagtgg
ggtcgtgatgatattgaaaatatagccagagaagtagaagggaagactccagaagaagtc
attgaatactcagctgtgttctgggaaagatgcaatgagctccaggacatagagaagatt
atggctcagattgaaaggggagaggcaagaattcaaagaagaataagtatcaagaaagca
ctggatacaaagattggacggtacaaagcaccctttcatcagctaagaatatcatatgga
actaacaaaggaaaaaactacactgaagaagaggatcgatttctcatctgtatgctgcac
aagcttggatttgacaaggaaaatgtttatgatgagttacgacaatgcattcgcaactcc
cctcagttcagatttgattggtttctcaagtccagaactgcaatggagctccaaaggagg
tgtaataccttaattactttgattgaaagagaaaatatggaactagaagaaaaggagaag
gcagagaaaaagaaaagaggaccaaagccttcaacacagaaacgtaaaatggatggtgcc
cctgatggtcgaggaagaaaaaagaagctgaaactatga
DBGET
integrated database retrieval system
