Peromyscus leucopus (white-footed mouse): 114701700
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Entry
114701700 CDS
T07241
Symbol
Xrn2
Name
(RefSeq) 5'-3' exoribonuclease 2 isoform X1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03008
Ribosome biogenesis in eukaryotes
pleu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114701700 (Xrn2)
09123 Folding, sorting and degradation
03018 RNA degradation
114701700 (Xrn2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pleu03021
]
114701700 (Xrn2)
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114701700 (Xrn2)
03009 Ribosome biogenesis [BR:
pleu03009
]
114701700 (Xrn2)
03016 Transfer RNA biogenesis [BR:
pleu03016
]
114701700 (Xrn2)
Transcription machinery [BR:
pleu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114701700 (Xrn2)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
114701700 (Xrn2)
Ribosome biogenesis [BR:
pleu03009
]
Eukaryotic type
Pre-60S particles
RNases
114701700 (Xrn2)
Transfer RNA biogenesis [BR:
pleu03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
114701700 (Xrn2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
DUF8363
Motif
Other DBs
NCBI-GeneID:
114701700
NCBI-ProteinID:
XP_028737678
LinkDB
All DBs
Position
4:123284141..123362586
Genome browser
AA seq
950 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKPKECSGVKIPVDASKPNPNDVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNNDPGWKNLTVILSDASVPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGE
FIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKE
KRKRMKRDQPAFTPSGILTPHALGSRNSPGCHVASNPRQAAYEMRMHGNSSPSVSPNTSF
ASDGSPSPLAGIKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMG
VFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEENRRNSLGGDVLFVGKLHPLRDFILELYQTGSTEPIDVPPELCHGIQG
KFSLDEEAILPDQTVCSPVPMLRDLTQNTAVSINFKDPQFAEDYVFKAVMLPGARKPAAV
LKPGDWEKSSNGRQWKPQLGFNRDRRPVHLDQAAFRTLGHAMPRGSGTGVYSNTAPPPAT
YQGSLYRPLLRGQAQIPKLMSNMRPQDSWRGPPPLFQQQRFDRNVGAEPLLPWNRMLQTQ
NAAFQPNQYQMLAGPGGYPPRRDDRGGRQGYPREGRKYPLPPPSGRYSWN
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggcgttcttccgctggctcagccgcaagtatccgtccatcattgtcaac
tgcgtggaggagaagccaaaagaatgcagtggtgtaaagattccagttgatgccagtaaa
cctaatccaaatgatgtggagtttgataatctgtatttggatatgaatggaatcatccat
ccctgtactcatcctgaagacaagccagcaccaaaaaatgaagatgaaatgatggttgca
atttttgagtacattgacagacttttcaatattgtaagaccaagaagacttctctacatg
gcaatagatggagtggcaccacgtgccaaaatgaaccaacaacgttcaaggaggtttaga
gcatcaaaggaaggaatggaagcagcagttgagaagcagcgagtcagagaagaaatactt
gcaaaaggtggctttcttcctccagaagaaataaaagaaagatttgacagcaactgtatt
acaccaggaactgagttcatggacaatcttgctaaatgccttcgctattacatagctgat
cgtttaaataatgaccctgggtggaaaaatttgacagttatattatctgatgctagtgta
cctggtgaaggagaacacaaaatcatggattacattagaagacaaagagcccagcctaac
catgacccaaatactcatcattgtttgtgtggagctgatgctgatctcattatgcttggt
cttgctacacatgaacctaatttcaccataatcagagaagaattcaaaccaaacaaaccc
aaaccatgtgctctgtgtaatcagtttggacatgaggtcaaggattgtgaaggtttgcca
agagaaaagaaaggaaagcatgatgaacttgcagatagtctgccttgtgcagaaggggag
tttatcttccttcggctgaatgtccttcgagagtatctggaaagagaactcaccatggcc
agtttaccattcccatttgatgtggagaggagcattgatgactgggtgttcatgtgcttc
tttgtgggcaatgatttccttcctcacttaccatcattagagattagggaaggtgcaatt
gatcgtttggttaacatatacaaaaacgtggtacacaaaactgggggttaccttacagaa
agtggttatgtcaatctgcaaagagtacagatgatcatgttagcagttggtgaagttgag
gatagcatttttaaaaagagaaaagatgatgaggacagttttagaagacgacagaaagaa
aaaagaaagaggatgaagagagatcaaccagcttttactcctagtgggatattaacacct
catgccttgggttcgagaaattcaccaggctgtcacgtagccagtaatccaagacaagcg
gcctacgaaatgaggatgcatggtaactctagtccctcagtatctcctaatacaagtttt
gcatctgatggctctccatctccgctagcaggaattaagaggaaagcagaagacagtgac
agtgagccagagccagaggataacgtcaggttatgggaagcaggttggaagcaacgatac
tacaagaacaaatttgatgtagacgcagctgatgagaaattccgacgtaaggttgttcag
tcctatgttgaaggactgtgctgggttcttcgatattattaccagggctgtgcttcctgg
aagtggtattatccattccattatgcaccatttgcctcagactttgaaggtattgcagac
atgtcttctgaatttgagaagggcacaaaaccgtttaagccactggaacaactcatgggg
gtctttccagctgcaagtggtaactttctacctccatcatggcggaagctcatgagtgac
cctgattctagtataattgacttctatccagaagattttgctattgatttgaatgggaag
aaatatgcatggcaaggtgttgctctgttgccatttgtggatgagcgaaggctgcgagcc
gccctagaagaggtgtacccagacctcactccagaagagaacaggagaaatagtcttgga
ggtgatgttttgtttgtggggaaacttcacccattacgtgacttcattttagagctgtat
cagacaggttccacagagccaatagatgtgccacctgaattgtgtcatgggattcaagga
aagttttctttggatgaagaagctattcttccagatcaaacagtatgttcccccgtgccc
atgttacgggacctgacacagaacactgcagtcagtattaattttaaagatccacagttt
gctgaagattatgtttttaaagctgtaatgcttccaggagcaaggaagccagcagcagta
ctaaaacctggtgattgggaaaaatccagcaatgggcggcagtggaaaccccagcttggc
tttaatcgagatcggcggcctgttcacctggaccaggcagcctttagaactttaggccat
gctatgccgagaggctcagggactggtgtttacagcaacacagcaccaccacctgccact
taccagggcagcttgtaccggccgctgttgagggggcaagcacagattccaaaacttatg
tcaaatatgaggccccaagattcctggcgaggtcctcctcctcttttccagcagcagaga
tttgacagaaatgttggagctgaacctctactgccgtggaaccgtatgctccaaacccaa
aatgcagcttttcagccaaaccagtaccagatgctggctggacctggaggatatccaccc
agacgtgatgaccgaggagggagacagggatatcccagagaaggaaggaaataccctttg
ccaccaccctcgggaagatacagttggaattag
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