Peromyscus leucopus (white-footed mouse): 114702015
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Entry
114702015 CDS
T07241
Symbol
Rfc1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03030
DNA replication
pleu03410
Base excision repair
pleu03420
Nucleotide excision repair
pleu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114702015 (Rfc1)
03410 Base excision repair
114702015 (Rfc1)
03420 Nucleotide excision repair
114702015 (Rfc1)
03430 Mismatch repair
114702015 (Rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pleu03032
]
114702015 (Rfc1)
03400 DNA repair and recombination proteins [BR:
pleu03400
]
114702015 (Rfc1)
DNA replication proteins [BR:
pleu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114702015 (Rfc1)
DNA repair and recombination proteins [BR:
pleu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114702015 (Rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
BRCT_2
RuvB_N
AAA_22
AAA_14
Rad17
AAA_5
AAA_18
AAA_16
AAA_33
Zeta_toxin
AAA_30
AAA_17
nSTAND3
AAA_7
RNA_helicase
NPHP3_N
NTPase_1
AAA_28
AAA_19
Motif
Other DBs
NCBI-GeneID:
114702015
NCBI-ProteinID:
XP_028738064
LinkDB
All DBs
Position
10:complement(52353614..52428024)
Genome browser
AA seq
1148 aa
AA seq
DB search
MDIRKFFGVISSGKKPVSESVKKNEKAKPPEGTVKGKKGAKEVKANNASKEDVSKPKPHK
RKRIIYDSDSESEETVQVKNAKKKSEKSEKLPLSSKPGKISRKDPVTYISETDEDDDFVC
KKAASKSKENGVSANSHRGASTAKKNEETTKTKNKPLSPIKLTPTSVLDYFGTESVQRSG
KKMVASRRKESSQNMDDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKT
KKAQKDPEEGESFSPVQADLSKAENHKSPDKAEHFLKERKPGSPAKPSRGGSSRGSAQPC
RSSARQSEACSSPKASSKLALMKAKEESSYKDTELTASKRKENAIELKGEKQTPKKTKSS
PAKKESVSPEDSEKKRNNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLES
IEREEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKILDEDGLLDLIR
TMPGKKSKYEIAAEAEMKKEKSKLERTPKKNDQGKRKVSPTEKESASKKSKPTPQKDSPA
KATKKEANVFRRGLDFTEQVVKETPGHGRARGPAEDRSGDRVESLLWVDKYKPTSLKNII
GQQGDQSCANKLLRWLRNWHQSSPEEKKHAKFGKLSSKDDGSSFKAALLSGPPGVGKTTT
ASLVCQELGYSYVELNASDTRSKNSLKAVVAESLNNTSIRGFYTSGAAPSVSSKHALIMD
EVDGMAGSEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQI
KSAMLSIAFKEGLKIPPPAMNEIILGANQDVRQVLHNMSMWCAQSKALTYDQAKADSQRA
KKDIKLGPFDVARKVFAAGEETAHMSLMDKSDLFFHDYSIAPLFVQENYLHVKPVAAGGD
MKKHLMLISRAADSICDGDLVDSQIRSKQNWSLLPTQAIYASVLPGELMRGYMTQFPSFP
SWLGKYSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSHIRDALVRPLASQGVEGVQH
VVTLMDTYYLMREDFENIMEVSSWGGQPSPFSRLDPKVKAAFTRAYNKEVHLTPYSLQVV
KTSRLSTGPALDSEYHEELQEEDSQSDEKEQDAIETDAMIKKKTRSSKPSKPEKDKESKK
GKGRSWKK
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggacattcggaaattctttggggttatatcaagtggaaaaaagcccgtgagtgagagc
gtaaagaagaatgagaaagcaaaacctccggaggggactgtcaaagggaagaagggagca
aaggaggtcaaggctaataacgccagtaaagaggatgtctccaaacccaagccgcacaag
aggaagaggatcatctacgactcagattcagaatcagaggagacagtgcaggtaaaaaat
gctaaaaagaaatcagaaaaatcagaaaaattgccactgtcttctaaacctggtaaaatt
tctcggaaggatcctgttacttacatttctgagacagatgaagacgatgactttgtgtgt
aaaaaggcagcctccaaatccaaagagaatggagtgtctgcaaacagtcaccgtggagca
tcaaccgcgaaaaagaatgaagagaccactaagactaagaataaacctttatcaccaata
aagcttacaccaacgtcagtgctcgattattttggaaccgaaagtgtccagagatctgga
aagaagatggtggcaagcagaagaaaagagtcttctcaaaacatggatgactccaggtta
aatgatgaggccattgccaagcagttgcagcttgatgaagacgcggagctggagaggcag
ttgcatgaagatgaagagtttgctcgaacgttagccatgttggatgaagaacccaagacc
aaaaaggcccaaaaggaccctgaagagggagaatcattttcacctgtccaagctgattta
agcaaagcagaaaaccataaaagccccgataaagcagagcacttcttaaaggaaaggaag
cccggcagtcctgctaagcccagccggggtgggagttccagagggtctgctcagccctgc
agatcgtcagctcgccagagcgaagcctgttcctctcccaaggctagctccaagctggca
cttatgaaagcaaaagaggaaagttcctacaaagacacagagctgacggcctcaaaaagg
aaagaaaacgccattgaactcaaaggagagaaacaaactcctaagaaaaccaaaagttct
ccagctaaaaaagagtctgtaagtccagaagattctgaaaagaaacgcaataattatcaa
gcttatcgaagctacttaaatcgagaaggtcccaaagctctgggctccaaagaaataccc
aagggagctgaaaattgcttggaaggcctgacctttgtgatcacaggcgtgctggagtcc
attgaacgcgaagaggccaagtctctaattgaacgttatggagggaaggtaacaggaaac
gtgagcaagaaaaccaactatctcgtcatgggccgggacagtggacagtccaagagtgac
aaggcagccgccctgggaacaaaaatccttgatgaagatggtctgttggatctgattcga
actatgccaggcaagaaatccaagtatgaaatagctgctgaagctgagatgaagaaagaa
aagtccaaattggagcgaacacccaaaaaaaatgaccagggaaaaagaaaagttagtcca
actgagaaggagtcagcgtctaaaaagagcaagccgaccccccaaaaggacagccctgca
aaggccaccaagaaggaagcgaatgtctttcggaggggcctggacttcacggagcaggtg
gtcaaggagacgcctggccacggcagggctcggggtccggccgaggaccgcagtggggac
cgagtggagagtctgctctgggtggataaatacaagcccacctcactcaagaacatcatc
ggacagcagggggaccagagctgtgccaacaaactgctgcgctggctccgaaactggcac
cagagttctcccgaagagaagaagcacgcaaaattcggcaaactttccagcaaagatgac
ggctccagtttcaaggcagcactgctctccgggccgccgggcgttggcaaaaccacaacc
gcttcccttgtgtgccaggaattgggctacagttacgtggaactaaatgcaagcgacact
cgcagtaagaacagtttgaaagcagtcgttgctgaatccttgaacaacaccagcatcaga
ggcttttatacaagtggagcagctccttcggtaagctcgaagcatgctctcatcatggat
gaggtcgacggcatggccggcagtgaggacaggggcggaattcaggaactaataggcctg
ataaagcatactaaaattcccatcatttgtatgtgcaatgacagaaatcaccccaaaatt
cgctctttggttcattattgttttgatcttcgtttccaaagacctcgggttgaacagatt
aagagtgcaatgctgtctattgcatttaaagagggtttaaagatccctcctccagctatg
aacgaaataattttgggagctaatcaagatgtcagacaggttttacataatatgagcatg
tggtgtgcacagagcaaggcactgacttacgaccaagccaaggctgactctcagagggcc
aagaaggacatcaaactgggtccatttgacgttgcccggaaagtgtttgcagctggagag
gagactgcacacatgtccctgatggacaaatcggatctctttttccatgactattccata
gcccccctctttgtccaggagaactatctccatgtaaagcctgtggctgcagggggggac
atgaagaagcacctgatgctcataagccgggccgcagacagcatttgtgacggtgactta
gtggacagtcagatccggagtaagcaaaactggagtcttctgcccacacaggccatttat
gccagtgttcttcctggagagttgatgaggggctatatgactcagtttccctccttccca
agctggctggggaagtactcctccacgggcaaacatgatcggatcgttcaggacctagcc
ttgcacatgagtctcagaacttactccagcaaaaggacagtgaacatggattacctgtca
cacatcagagatgcccttgtgcgacccttggcctcacaaggggtagaaggagttcagcat
gttgtcacacttatggacacatactatttgatgagagaagactttgagaatatcatggaa
gttagcagctggggtggccagcccagtcccttttccaggctggatcccaaggtgaaagca
gccttcacaagagcttataacaaggaggtccatctgaccccatactcacttcaggtagta
aagacatcgagactcagcacaggccctgcactggattctgaataccatgaagagttacaa
gaagaagacagtcagtctgatgagaaagagcaggatgcaatagagaccgatgccatgatc
aagaaaaagacaagatcttcaaagccttcaaaaccagaaaaagacaaggagtccaaaaaa
ggaaaaggaagaagctggaagaaatga
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