Peromyscus leucopus (white-footed mouse): 114702220
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Entry
114702220 CDS
T07241
Symbol
Hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04371
Apelin signaling pathway
pleu04613
Neutrophil extracellular trap formation
pleu05034
Alcoholism
pleu05203
Viral carcinogenesis
pleu05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
114702220 (Hdac5)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
114702220 (Hdac5)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
114702220 (Hdac5)
05203 Viral carcinogenesis
114702220 (Hdac5)
09165 Substance dependence
05034 Alcoholism
114702220 (Hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pleu03036
]
114702220 (Hdac5)
Enzymes [BR:
pleu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
114702220 (Hdac5)
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
114702220 (Hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
114702220
NCBI-ProteinID:
XP_028738405
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All DBs
Position
8b:90218766..90255259
Genome browser
AA seq
1123 aa
AA seq
DB search
MLLVPKAQGLVEMLQTIYETESCFSADGMSGREPTLEILPRTPLHSIPVAVEVKPVLPGA
MPSSMGGGGGGSPSPVELRGALAGPMDPALREQQLQQELLVLKQQQQLQKQLLFAEFQKQ
HDHLTRQHEVQLQKHLKQQQEMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLILRNK
EKSKESAIASTEVKLRLQEFLLSKSKEPTAGSLNHSLPQHPKCWGVHHASLDQSSPPQSG
PPGTPPSYKLPLLGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVI
STFKKRAVEITGTGPGVPSSACNSACNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEM
LPQHRALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQ
SLRQGGTLTGKFMSTSSIPGCLLGVALEGDTSPHGHASLLQHVLLLEQARQQSTLIAVPL
HGQSPLVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQK
HQQMQLGKILTKTGELPRQPTTHPEETEEELTEQQEALLGEGALTMPREGSTESESTQED
LEEEEDEEEEEEDCIQVKDEDGESGPDEGLDLEESNAGYKKLFTDAQQLQPLQVYQAPLS
LATVPHQALGRTQSSPAAPGSMKSPPDQPTKHLFTTGVVYDTFMLKHQCMCGNTHVHPEH
AGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKL
LGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAII
RPPGHHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSV
LYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMP
IAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHD
LTAICDASEACVSALLSVELQPLDEAVLQQKPSVNAVTTLEKVIEIQSKHWSCVQRFATG
LGCSLREAQTGETEEAETVSAMALLSVGAEQAQAVATLEHSPR
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgttgctggtgcccaaggcacaggggctcgtggagatgctgcaaaccatctatgagacc
gagtcctgtttctcagcagatggcatgtcaggccgggaaccaaccttggaaatcctgcca
cggactcctctgcacagcatccctgtggcagtggaggtgaagccggtgctgccaggagcc
atgcccagctccatggggggtggaggtggaggtagccccagccctgtggagctgcggggg
gctctggcaggccccatggaccctgcgctacgggagcagcagctgcagcaagagctcctg
gtgctcaagcagcagcagcagctgcagaagcagctcttgttcgccgagtttcagaagcag
cacgaccacctgacgaggcagcatgaagtccagctgcagaagcacctcaagcagcagcag
gagatgctggcggctaagaggcagcaggagctggagcagcagcggcagcgggagcagcag
cggcaagaggagctggagaagcagcggctggagcagcagctgctcatcctccgcaacaag
gagaagagcaaagagagtgccatcgccagcaccgaggtaaagctgaggctccaggaattc
ctcttgtcgaagtcaaaggagcccacggcaggcagcctcaaccattccctcccacagcac
cccaaatgctggggagtccaccatgcttctttggaccagagttcccctccccagagcggc
cctcctgggacgcctccctcctacaaactgcctttgcttgggccctatgacagccgcgat
gacttccccctccgcaaaacagcctctgaacccaacttaaaagtccgttcgaggctaaaa
cagaaggtggcggagaggagaagcagtcccctcctgcgtcgaaaggatggcactgttatc
agtacctttaagaagagagcggttgaaatcacgggcacagggcctggggtgccgtcctcc
gcgtgtaacagtgcgtgtaacagtgcgcccggctccggccccagctctcccaacagttcc
cacagcaccatcgctgaaaacggcttcactggctcggtccccaacatccccacggagatg
ctcccccagcaccgggccctccctctggacagctccccaaaccagttcagcctctacacg
tctccttctctgcccaacatctccctagggctgcaggccacagtcactgtcaccaactcg
cacctcaccgcctccccgaagctgtcgacacagcaggaggctgagaggcaggcccttcag
tccctgcggcagggcggcacactgactggcaagttcatgagcacatcgtccatccccggc
tgcctgctgggcgtggcactggagggcgacacgagcccccacgggcacgcctctctgctg
cagcatgttctgctgctggaacaggcccggcagcagagcacactcatagctgtgccactc
catgggcagtccccattggtgacgggtgaacgtgtggccaccagcatgaggacggtgggc
aagctcccgaggcaccgacctctgagccgcactcagtcctccccactgccgcagagtccc
caggcgctgcagcagctggtcatgcagcagcagcaccagcagttcctagagaagcagaag
caccagcagatgcagctgggcaagatccttaccaagactggggagttgccaaggcagccc
accacccaccccgaggagacagaggaggagctgacagagcagcaggaggccttgctgggg
gagggggccctgaccatgccccgggaaggctccacagagagcgagagcacccaggaagac
ctagaggaggaggaggatgaagaggaggaggaggaagactgcattcaggtcaaggacgag
gacggcgagagtggtcctgatgagggcctcgacttagaggagtccaatgctggctacaaa
aagttgttcacagatgcccagcagctgcagcccctgcaggtgtaccaggcacccctcagc
ctggccactgtgcctcatcaggccctgggccgcacccagtcctcgcctgctgctcccggg
agcatgaagagccccccagaccagcccactaagcacctcttcaccacaggtgtggtctat
gacacgttcatgctgaagcaccagtgcatgtgcgggaatacacatgtgcacccagagcac
gccggccgcatccagagcatctggtcccggctgcaggaaactggcctgctcagcaagtgt
gagcggatccggggtcgcaaagccacgctggatgagatccagacagtgcactctgagtac
cacaccctgctctatgggaccagccccctcaaccggcagaagctggacagcaagaagctg
cttggccccatcagccagaagatgtacgccatgctgccttgtgggggcattggggtggac
agtgacactgtgtggaatgagatgcactcctccagtgctgtgcggatggcagtgggctgc
ctggtggagctggccttcaaggtggctgcgggagagctgaagaatggatttgctatcatc
cggcccccaggacatcatgccgaggagtccacagccatgggattctgcttcttcaactcc
gtggccatcacagctaaactcctgcagcagaagctgaacgtgggcaaggtcctcatcgtg
gactgggacattcaccatggcaacggcacccagcaagcattctacaatgacccctctgtg
ctctacatctccctgcatcgctatgacaatgggaacttctttccgggctctggggctcct
gaagaggttggtggagggccaggcgtggggtacaatgttaatgtggcgtggacaggaggt
gtggatccccccattggcgatgtggaatacctgacagccttcaggacagtggtgatgccc
attgctcacgagttctcacctgacgtcgtcctagtctccgctgggtttgatgctgttgaa
ggacatctgtctccactgggtggctattctgtcaccgccagatgttttggccacctcacc
aggcagctcatgacactggccgggggccgggtggtgctggccctggagggaggccacgac
ttgaccgccatctgtgatgcctccgaggcctgtgtctcggctctgctcagcgtggagctg
cagcccttggatgaagcagtcttgcagcaaaaacccagcgtcaatgcagttaccacacta
gagaaagtcatcgagatccagagcaaacactggagctgtgtacagaggtttgccactggg
ctaggctgctctctgcgggaggctcagacaggtgaaacggaggaggccgagactgtgagc
gccatggccctgctttctgtgggggctgagcaggcccaggctgttgccactctagagcac
agccccaggtaa
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integrated database retrieval system
