Peromyscus leucopus (white-footed mouse): 114702554
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Entry
114702554 CDS
T07241
Symbol
Pcdh9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
114702554 (Pcdh9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pleu01009
]
114702554 (Pcdh9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pleu04515
]
114702554 (Pcdh9)
Protein phosphatases and associated proteins [BR:
pleu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114702554 (Pcdh9)
Cell adhesion molecules [BR:
pleu04515
]
Cadherins
Protocadherins
114702554 (Pcdh9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Big_9
V_ATPase_I
EphA2_TM
RCR
DUF6249
7tm_3
MAP17
DUF6377
Motif
Other DBs
NCBI-GeneID:
114702554
NCBI-ProteinID:
XP_028738847
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All DBs
Position
9:30301665..30865312
Genome browser
AA seq
1130 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFNREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDED
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAK
VTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKALHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQCNSHNKSD
NIPVTHQKCPSSTGFHIRENEASHSESQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLI
SHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSGESSSGLHSMRLFWLSS
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttaaggctggattcg
gcaatagctcaagaacttatttacactattagagaggaattgcctgaaaatgtgcccata
ggaaatataccaaaggacctgaacatttctcacatcaatgctgccacagggaccagtgcc
agccttgtctacagactggtttctaaagccggggatgcccctctggtaaaagtgtccagc
agcaccggggagattttcaccacctccaacagaatagacagagagaaactctgtgccgga
gcctcttatgctgaggagaatgagtgtttctttgaacttgaggtggtgatcctccccaat
gactttttcaggctgatcaaaatcaagatcattgtcaaggataccaatgataatgcccca
atgtttccgtctcctgtcatcaatatttccattccagaaaacactttgatcaacagccgc
tttccaatcccgtcagccacagaccctgacacaggcttcaatggggtgcagcattatgaa
ttgctaaacgggcagagtgtttttggactggatatcgtggaaactccagagggagaaaag
tggccgcaattgattgttcagcagaacttggatcgagaacaaaaagatacctatgtaatg
aaaatcaaagtggaggacggaggcaccccacagaaatccagcacagccatactgcaggtc
acagttagtgatgtgaatgacaacagacccgtgtttaaagagggtcaagtcgaggtgcat
attccagagaacgctcctgtggggacctctgtaattcagctccacgctactgatgcagac
ataggcagcaatgctgaaatccgctacatttttggtgcccaggtcgcccctgcaaccaaa
agactctttgctttaaataacacaactgggctgattacagttcagaggtctttggatagg
gaagagacagccattcacaaagtgaccgtgctggctagtgatggcagttccactcctgcc
agagccacagttaccatcaatgtcacagatgtaaatgataaccctccgaacatagacctc
aggtacattataagtcccatcaacggcacagtgtatctatctgagaaagatccagtcaat
acaaagattgccctaattacagtttcagataaggacacagacgtgaacggcaaagtgatc
tgttttattgaaagagaggtcccatttcatctgaaggcagtgtatgacaaccagtatctg
ctagagacctcttctctgctggactatgagggcaccaaagaattcagctttaaaatcgtt
gcctctgattctgggaagcccagtttgaaccagactgccctggtaagggttaagcttgag
gatgaaaatgacaacccaccaattttcaaccagcctgtaattgagctgtcagtttctgaa
aacaaccgacgtgggttatacttaacaactattagtgctacagacgaagacagtgggaaa
aatgcagacattgtttatcagcttggaccgaatgcctccttctttgatctggacagaaag
acaggagttttgacagcctccagagtctttaacagggaggaacaagagcggttcattttt
acagtaactgccagggacaatgggacccctcccctccaaagccaagctgccgtgatagtc
actgttctggatgagaacgacaatagccccaagtttactcataatcattttcagtttttt
gtgtctgagaatctgccaaagtatagtactgtgggagtcatcacagtgacagatgaagac
gctggagagaataaagctgtgactctctccattctaaatgacaatgaaaattttgtcttg
gatccctactcaggagtcatcaagtcaaatgtctcctttgaccgagagcagcagagttcc
tacacttttgatgtcaaagccactgatggaggacagccgcctcggtcctctactgcaaaa
gtaactatcaatgtgatggatgtcaatgacaatagtccggttgtgatttcgccaccatcc
aacacctcgtttaagttggtgccactctcagccattcctggttctgtggttgcggaagtt
tttgcagtggatattgacactggaatgaacgctgaacttaagtataccatagtgagtggg
aacaacaaaggattatttcggattgacccagtaacaggcaatatcactctagaagaaaag
ccagcaccgactgacgtgggcctgcaccgtctagtggtcaacataagtgacctggggtac
cctaaggctttgcacacccttgtgctagtatttctttatgtcaatgatacggctggcaat
gcctcgtacatatatgacttgatccgcaggactatggagaccccactggacaggaacata
ggagatagtagccaaccctatcaaaacgaggactatctcaccatcatgattgccatcgtc
gcgggggccatggtggtcatagttgtgatctttgtcactgttctggtgcgctgtcgccat
gcgtcaaggttcaaagcagctcagaggagcaagcaaggtgctgagtggatgtccccaaac
caggagaataagcaaaacaagaagaagaaacggaagaaaagaaagtcacccaagagttct
ctattgaactttgtaactattgaagagtccaaacccgatgatgcagtccacgaacctatc
aatgggaccataagcctgcctgctgagcttgaggaacagagtataggaagatttgactgg
ggacctgcacccccaacaaccttcaagcctaacagtcctgacctggccaagcactacaaa
tctgcctctccgcagcctgcttttcatctcaaaccagacactccagtttccgtgaaaaag
caccatgtcattcaggagctccctttggacaacaccttcgttgggggctgtgacacgctt
tccaaacgctcctccactagttcagaccacttcagtgcctcagagtgcagctcccaagga
ggcttcaagacaaagggccccttacacaccagacagtgtaactcacacaacaaaagtgac
aatattcctgtcacacatcagaaatgccccagctctactggtttccacattcgagagaat
gaagcaagtcattccgagtctcagcgccgtgttacctttcacctcccggatggttcccag
gaaagctgcagtgacagtggtctgggagaccacgagccggtgggtagtggaaccctgatc
tcacaccctcttcctctggttcagccacaggacgaattctacgaccaggcctctccggac
aagaggaccgaagcagacggcaactcggaccccaactctggtgagtcctcttctggtctt
catagcatgaggttgttctggttgagtagttag
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