Peromyscus leucopus (white-footed mouse): 114702605
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Entry
114702605 CDS
T07241
Symbol
Chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X3
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pleu03036
]
114702605 (Chd5)
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114702605 (Chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
114702605
NCBI-ProteinID:
XP_028738897
LinkDB
All DBs
Position
2:150429732..150481104
Genome browser
AA seq
1979 aa
AA seq
DB search
MRGPLGTEEELPRLFAEEMENEEEMSEEDDGGLEGFEDFFPAEPVSLPKKKPKKLKESKS
KGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPTKKKKKKLKEKKEKKAKRKKRDEDED
DNGDGCLKEPKSSGQLMAEWGLDDVDYLFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPM
SKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPPLAISPQQVPQPLPIRK
AKTKEGKGPGVRKKTKGAKDAKKKGRGKRVAGLKFRFGGISKRKKGSSSEEDEREESDLD
NASIHSSSVRSECSAALGKKNKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDTCP
RAYHLVCLDPELEKAPEGKWSCPHCEKEGVQWEPKDDDEEEEEGGCEEEEDDHMEFCRVC
KDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPPA
PFMVGLPGPEVEPGMPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNY
QRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMVHRILNHSF
DKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDARLPKRLVKK
GKKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTI
LADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTG
DKESRSVIRENEFSFEDNAIRGGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWA
CLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLE
GFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKF
ILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKS
SGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEA
IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK
VMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFK
DDVEGMMSQGQRPATPTPEVQSSKGGSLAASAKKKHGSTPPGDNKDVEDSSVIHYDDAAI
SKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREVIKQEENVDPDYWEK
LLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDED
FEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMP
PQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLT
RIGVMSLVRKKVQEFEHVNGKYSTPDLVPEGPEGKKPCEVISSDPNTPVPASPAQLPPAP
LGLPDKMEAQLGYMDEKESGVQKSKKPQEIQALPTALDRVEGEDKHPSSDSKDRAREERM
EEVEKAQGSPEQSLKEEVLPDKAPIPDKLEPSPSHSSDFRADDSRAEEKEPMETQQNGDR
EEDEEGKKEDKNGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYEIWHRRHDYWLLA
GIVTHGYARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQL
RRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEE
LLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQTSSRPHDFLPLQ
RSFPAEPATCPTPTGEKSYSPFRSWCRVGTQKGNQAILSHRGRGPAWLHESPEVPPHHS
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcaccgaggaggagctgccgcggctgttcgcggaggagatggag
aacgaggaggagatgtcagaagaagatgatggtggccttgaaggcttcgaggatttcttc
cctgcagagcccgtgagccttcccaagaagaagcctaagaaactgaaagagagcaagtcc
aaaggcaagaggaagaagaaggaggggagcaacgatgaactgtcggaaaatgaggaggat
ctggaagagaagtcggagagcgaaggtagcgattactccccgaccaagaagaagaagaag
aaactgaaggagaagaaggagaagaaagccaagcggaaaaagagggatgaggacgaggat
gacaatggcgatgggtgcttgaaggagcccaagtcctcgggacagctcatggctgagtgg
ggccttgatgatgtcgactacctgttctcagaggaagactaccatacgctgaccaactac
aaggccttcagccagttcctccggccgctcattgccaagaagaacccgaagattcccatg
tccaaaatgatgactgtcttgggggccaagtggcgagaattcagcgccaacaacccattt
aagggtagctcagcagcagcagctgcggcggctgtggccgcagctgtggagacggtgacc
atcgctcctccactggccatcagtccccagcaggtgccccagcctctgcccatccgcaag
gccaagaccaaagaaggcaaagggcccggagtgaggaagaagaccaaaggcgccaaagac
gccaagaaaaaggggcggggcaagcgagtggccgggctcaagttccgctttggagggatc
agcaagaggaagaaggggtcctcgagcgaagaggatgagcgtgaggagtcagatctggac
aacgccagcatccacagctcttccgtgcgctccgagtgctctgcagctctgggcaagaag
aacaagaggaggcgcaagaagaagaggattgatgatggcgacggctatgagacagaccac
caggactactgtgaagtgtgccagcagggcggggagatcattctgtgcgacacttgcccg
agggcctaccacctggtctgcctggacccggagctggagaaggctccggagggcaagtgg
agctgcccgcactgtgagaaggagggggtccagtgggagccgaaggacgacgatgaggaa
gaggaggagggcggctgtgaggaggaggaggatgatcacatggagttctgccgcgtgtgc
aaggatggtggcgagctcctgtgttgcgatgcctgcccctcctcctaccatctgcattgc
ctcaacccgccgctgcccgagatcccgaacggtgaatggctctgcccgcgctgtacatgt
cccccactgaagggcaaagttcagcggatcctacactggcggtggactgaacccccggct
ccctttatggtggggctgccaggaccagaggtggagccaggcatgcccccgcccaagcct
ctggagggcattcctgagagagaattctttgtcaagtgggctgggctctcttactggcac
tgctcctgggtgaaggagctacagctggagctgtaccacaccgtgatgtatcgcaactac
caaagaaagaacgatatggacgagccaccacccttcgattacggctctggtgacgaggac
ggtaagagcgagaagcggaagaacaaggaccctctctatgccaagatggaggagcgtttc
taccgttacggcatcaagccagagtggatgatggtccaccgcatcctgaaccacagcttt
gacaagaagggggacgtgcattacctgatcaagtggaaggatttaccctatgaccagtgc
acctgggagattgatgacatcgacatcccctactacgacaacctgaagcaagcctactgg
ggccacagggagttgatgctgggagaggatgccaggcttcccaagaggctggtcaagaag
ggcaagaagctgaaggacgataaacaagagaagccaccggacacgcccatcgtggatccc
actgtcaagttcgacaagcagccgtggtacatcgactccacaggaggcacgctgcaccct
taccagctggagggcctcaactggttacgtttctcctgggcccagggcaccgacaccatc
ctggctgacgagatgggtttgggcaagaccgtgcagaccattgtctttctctattccctg
tacaaggagggccactccaaggggccttaccttgtcagcgcgcccctgtccaccatcatc
aactgggaacgtgagtttgagatgtgggcacctgacttttacgtggtcacctacacgggg
gacaaggagagccgctctgtgatccgtgagaacgagttttccttcgaggacaacgccatt
cggggagggaagaaagtattccgcatgaagaaggaagtgcagatcaaattccatgtgctg
ctcacctcctatgagctcatcaccatcgaccaagccatcctgggctccatcgagtgggcc
tgcctcgtggtggacgaggcccaccggcttaagaacaaccagtccaagttctttagggtc
ttgaatagctacaagatcgactacaagctgctgctgacagggacccccctccagaacaac
ctggaagagctattccatctcctcaacttcctgactccagagaggttcaacaatctggaa
ggcttcctggaggagtttgctgacatctccaaagaagaccagatcaaaaaactgcacgac
ctgctggggccgcacatgctccggaggctcaaggctgacgtatttaagaacatgccggct
aagacagagctgatcgtccgtgtggagctgagccagatgcagaagaagtactacaagttc
atcctcacacggaactttgaggcactcaactccaaggggggcggcaaccaggtgtctctg
ctcaacatcatgatggacctgaagaagtgctgcaaccacccgtacctcttccccgtggct
gccgtggaggcccctgtgctgcccaatggctcctacgatggcagctccctggtcaagtct
tcagggaagctcatgctgctgcagaagatgctcaagaagctgcgggatgaaggacatcga
gtgctgatcttctcccagatgaccaagatgttggacctcttggaggacttcctggagtat
gagggctacaagtatgagcgaattgatggaggcatcactgggggcctccggcaagaggcc
atcgacagattcaatgctcctggggcccagcagttctgcttcctgctctcgacccgggcc
ggtggcctgggcatcaatctggccacagcagacacagtcatcatctacgactcggactgg
aaccctcacaatgacatccaggccttcagccgcgctcaccgcatcgggcagaacaagaag
gtgatgatctaccgcttcgtgacccgggcctctgtggaggagcgcatcactcaggtggcc
aagcgcaagatgatgctcacacatttggtggtgcggcctggcctgggctccaagtcaggc
tccatgaccaagcaggagctggatgacatccttaagttcggcacagaggagctcttcaag
gatgacgtggagggcatgatgtcccagggccagaggcctgccacacccacccccgaagtg
cagtcctccaagggcggatctctggctgccagtgcgaagaaaaagcatggcagcacccca
ccaggtgacaacaaggatgtggaagacagcagcgtgatccactatgatgatgcggctata
tccaagctgctggaccggaaccaggatgccacagatgacacggagctacaaaacatgaac
gagtacctgagctccttcaaggtggcacagtatgtggtccgcgaggaagacggcgtggag
gaggtggagcgggaggtgattaagcaggaggagaatgtggaccctgactactgggagaag
ctgctgcgtcaccactatgagcagcagcaggaggacttggcccgcaacctgggcaagggc
aagcgcatccgcaagcaggtcaactacaacgacgcctcccaggaggaccaggagtggcaa
gacgagctctcggacaaccagtctgagtattccatcggctccgaggatgaggacgaggac
ttcgaggagagacccgaggggcagagtggacgacggcaatctaggaggcagctgaagagt
gacagggacaagcccctgccgcctcttctggctcgagttgggggcaacattgaggtgctg
ggcttcaatgccagacagaggaaggcttttctgaatgccatcatgcgctggggcatgccc
ccccaggatgccttcaactcccactggctggtgcgggaccttcgtgggaagagtgagaag
gaatttagagcctatgtgtccctcttcatgcggcacctgtgtgagccgggggcagacggt
gcagagaccttcgcagatggtgtgccccgggagggcctgtccagacagcacgtgctcacg
cgcattggggtcatgtcgctggttaggaagaaggttcaggagtttgaacacgtcaacggg
aagtacagcacccctgacctggtccctgagggaccagagggcaagaagccgtgtgaggtg
atctcctcggatcccaacacacccgtgcctgccagccctgcacagctccctccagccccg
ctggggctgccagacaaaatggaagcccagctcggctacatggatgagaaggagtcgggc
gtgcagaagtcaaagaagccccaggaaatccaggccctgccaactgccctggacagagtg
gagggtgaggacaagcatccgagctcagacagcaaggacagagctcgagaggagaggatg
gaggaggtggagaaggcccagggctctccggagcagtcactgaaagaggaagtgctgcca
gacaaggcgccgatcccagacaagctggagccgagcccgagtcacagcagcgacttcagg
gcagatgactccagggctgaggagaaggagcccatggagacacagcaaaatggtgacaga
gaggaagatgaggaggggaagaaagaagacaaaaacgggaaattcaagttcatgttcaac
attgcagatggcggcttcacagaactgcacacgctgtggcagaatgaggaacgggctgct
gtgtcctcgggaaaaatctacgaaatctggcaccgccgtcatgactactggctgctggca
ggcatcgtgacacatggctatgcccgctggcaggacattcagaacgacccgcggtacatg
atcctcaacgagccctttaagtctgagatccacaagggcaactacttggaaatgaagaac
aagtttttggcccgcaggttcaagctgctggagcaggcactggtgatcgaggaacagctc
cggagggctgcgtacctcaacatgacccaggatcccaaccacccggccatggcgctcaac
gctcgcctggcagaggtggagtgccttgctgagagccaccagcacctgtccaaggagtcc
ctggccgggaacaagcctgccaacgctgtcctgcacaaggtcctgaaccagctagaggaa
ctgctgagcgacatgaaggcggatgtgactcgcctgccctccatgttgtcacgcattccc
ccggtggctgcccgtctgcagatgtccgaacgcagcatcctgagtcgcctcaccaaccgt
gctggtgaccccaccatccagcagacatctagtcgtcctcatgacttcctcccgttgcag
cgatcctttccagctgagccggccacctgcccaacccccacgggagagaaaagctacagc
ccttttaggagttggtgccgtgttgggacacaaaagggaaaccaagcaattctgtcgcac
agaggacgaggcccagcctggctgcacgagagcccagaagtgccacctcatcatagctga
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integrated database retrieval system
