KEGG   Peromyscus leucopus (white-footed mouse): 114702794
Entry
114702794         CDS       T07241                                 
Symbol
Rxra
Name
(RefSeq) retinoic acid receptor RXR-alpha
  KO
K08524  retinoid X receptor alpha
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Pathway
pleu03320  PPAR signaling pathway
pleu04148  Efferocytosis
pleu04151  PI3K-Akt signaling pathway
pleu04659  Th17 cell differentiation
pleu04919  Thyroid hormone signaling pathway
pleu04920  Adipocytokine signaling pathway
pleu04928  Parathyroid hormone synthesis, secretion and action
pleu04932  Non-alcoholic fatty liver disease
pleu04976  Bile secretion
pleu05160  Hepatitis C
pleu05200  Pathways in cancer
pleu05202  Transcriptional misregulation in cancer
pleu05207  Chemical carcinogenesis - receptor activation
pleu05216  Thyroid cancer
pleu05222  Small cell lung cancer
pleu05223  Non-small cell lung cancer
pleu05226  Gastric cancer
pleu05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    114702794 (Rxra)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    114702794 (Rxra)
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    114702794 (Rxra)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    114702794 (Rxra)
   03320 PPAR signaling pathway
    114702794 (Rxra)
   04919 Thyroid hormone signaling pathway
    114702794 (Rxra)
   04928 Parathyroid hormone synthesis, secretion and action
    114702794 (Rxra)
  09154 Digestive system
   04976 Bile secretion
    114702794 (Rxra)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    114702794 (Rxra)
   05202 Transcriptional misregulation in cancer
    114702794 (Rxra)
   05207 Chemical carcinogenesis - receptor activation
    114702794 (Rxra)
  09162 Cancer: specific types
   05226 Gastric cancer
    114702794 (Rxra)
   05216 Thyroid cancer
    114702794 (Rxra)
   05222 Small cell lung cancer
    114702794 (Rxra)
   05223 Non-small cell lung cancer
    114702794 (Rxra)
  09172 Infectious disease: viral
   05160 Hepatitis C
    114702794 (Rxra)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    114702794 (Rxra)
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    114702794 (Rxra)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pleu03000]
    114702794 (Rxra)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:pleu03310]
    114702794 (Rxra)
Transcription factors [BR:pleu03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    114702794 (Rxra)
Nuclear receptors [BR:pleu03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   114702794 (Rxra)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 114702794
NCBI-ProteinID: XP_028739199
LinkDB
Position
4:complement(11755500..11846096)
AA seq 467 aa
MDTKHFLPLDFSTQVNSSSLSSPTGRGSMAAPSLHPSLGPGIGSPLGSPGQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPTTPTLGFGTGSPQLNSPMNPVSSSEDIKPPLGLNG
VLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK
DCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKI
LEAELAVEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLD
DQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVS
KMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQTT
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggacaccaaacatttcctgccgctcgacttctccacccaggtgaactcttcatccctc
agctctccaacgggtcgaggctccatggctgcaccctcgctgcacccctcgctgggccca
ggaattggctctcccctgggctcccctgggcagctgcactcgccgatcagcaccctgagc
tctcccatcaatggcatgggtccacccttctctgtcatcagctcccctatgggcccgcac
tccatgtcggtacccaccacccccacactgggcttcgggactggtagcccccagctcaac
tcacccatgaaccccgtgagcagcagtgaggacatcaagcccccgctgggcctcaatggc
gtcctcaaggttcctgcccatccctcaggaaatatggcatccttcaccaagcacatctgt
gctatctgtggggaccgctcctcaggcaagcactatggggtatacagctgtgagggctgc
aagggcttcttcaagaggacagtccgcaaagacctgacctacacctgccgagacaacaag
gactgcctgatcgacaagaggcagagaaaccggtgtcagtactgccgctaccagaagtgc
ctggccatgggcatgaagcgggaagccgtgcaggaggagcggcagagaggcaaggaccgg
aatgagaatgaggtggagtccaccagcagtgccaatgaggacatgcctgtggagaagatt
ctggaagcggagcttgctgttgagcccaagactgagacatacgtggaggcaaacatgggc
ctgaaccccagctcaccaaatgaccctgttaccaacatctgtcaagcggcagacaagcag
ctcttcactcttgtggagtgggccaagaggatcccgcacttctctgagctgcctctggac
gaccaggtcatcctgctacgggcaggctggaacgagttgcttattgcctccttctcccac
cgctccatagctgtgaaagacgggatcctccttgccactggcctgcatgtacaccggaac
agtgctcacagtgctggggtgggcgccatctttgacagggtgctaacagagctggtgtct
aagatgcgtgacatgcagatggacaagacggagctgggctgcctgcgtgccattgtcctc
ttcaaccccgactccaaggggctttcaaaccctgccgaggtggaggcgctgagggagaag
gtgtacgcatcactagaggcatattgcaaacacaagtatccggagcagccgggcaggttc
gccaagctgctgctccgcctgcccgcactgcgctccatcgggctcaagtgcctggagcac
ctgttcttcttcaagctcatcggggacacgcccattgacaccttcctcatggagatgctg
gaggccccgcatcaaaccacctag

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