Peromyscus leucopus (white-footed mouse): 114703363
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Entry
114703363 CDS
T07241
Symbol
Fdft1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu00100
Steroid biosynthesis
pleu01100
Metabolic pathways
Module
pleu_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
114703363 (Fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pleu01006
]
114703363 (Fdft1)
Enzymes [BR:
pleu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
114703363 (Fdft1)
Prenyltransferases [BR:
pleu01006
]
Terpene biosynthesis
Squalene/phytoene synthase
114703363 (Fdft1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
Motif
Other DBs
NCBI-GeneID:
114703363
NCBI-ProteinID:
XP_028739998
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All DBs
Position
9:60010133..60033168
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AA seq
417 aa
AA seq
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MEFVKCLGHPEEFYNLLRFRMGGQRKFIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQA
LDGEMRHAVCVFYLVLRALDTVEDDMTISVEKKIPMLRNFHTFLYEPEWRFTESKEKDRQ
VLEDFPTISLEFRNLAEKYQTVIADICQKMGCGMAEFVDKRVTSKQDWDKYCHYVAGLVG
IGLSRLFSASEFEDPLVGEDTECANSMGLFLQKTNIIRDYLEDQLEGREFWPQEVWGRYV
KKLEDFAKPENIDVAVQCLNELITNSLYHIPHVITYLSRLRNQSVFNFCAIPQVMAIATL
AACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIHQYIEEIYHRIPNTDPSSSETK
QIISTIRTQNLPNCQLISRSHYSPIYLSFVMLLAALSWQCLSTLSQVTEDYVQTGEH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgtcaagtgcctaggccacccggaggagttctacaacctgctgcgattccgc
atgggaggccagcggaagttcatacccaagatggaccaggactccctcagcagcagcttg
aagacctgctacaagtatctgaatcaaaccagtcgcagcttcgccgccgtcatccaggcg
ctggatggggaaatgcgccacgcagtatgtgtgttttacctggttctccgagctctggac
actgtggaggatgacatgaccatcagtgtggagaagaagatcccaatgctgcgcaacttt
cacactttcctctacgaaccagagtggcgcttcacagagagcaaggagaaggaccgccaa
gtgctggaggacttccccacgatctccctggagtttagaaatttggctgagaaatatcaa
acagtgattgctgacatctgccagaaaatgggatgtgggatggcagaatttgtggacaag
cgtgtgacctccaaacaggactgggacaagtattgccactacgttgctggactggtagga
attggcctttctcgtctgttctcggcctcggagtttgaagaccccttagttggtgaggac
acagagtgtgccaactcaatgggtctattcctgcagaaaacaaatatcattcgtgattat
ctggaagaccaacttgaaggaagagagttttggcctcaagaggtgtggggcagatacgtt
aagaagctggaagactttgctaagccagaaaacatagatgtggccgtgcagtgcttgaat
gaactcataaccaactccctgtaccatatcccccacgtcatcacctacctgtcaaggctc
cggaaccaaagtgtgtttaacttctgtgccattccacaggtaatggccatcgctacactg
gctgcctgttacaacaatcagcaggttttcaaaggggtcgtgaagattcggaaggggcaa
gcggttaccctcatgatggatgccaccaacatgccagctgtcaaagctatcatacaccag
tatatagaagagatttatcaccggatccccaacacagacccgtcttctagcgaaaccaag
cagatcatctccaccatccggacacagaaccttcccaactgtcagctcatctcccgaagc
cactactcccccatctacctgtcgtttgtcatgctcttggctgccctgagctggcagtgc
ctgagcaccctgtcccaggtcacagaagactatgtgcagacaggagaacactga
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