Peromyscus leucopus (white-footed mouse): 114703396
Help
Entry
114703396 CDS
T07241
Symbol
Patl1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114703396 (Patl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114703396 (Patl1)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114703396 (Patl1)
mRNA degradation factors
5'-3' decay
Decapping complex
114703396 (Patl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
114703396
NCBI-ProteinID:
XP_028740047
LinkDB
All DBs
Position
1:5931884..5961460
Genome browser
AA seq
770 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PAAADEQTGNRERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPQPRS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
VIGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCSV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQMLPPAPGFRAFFSVPPPGTPPPQQHPPGPGPHLQNLRPQAPMFRPDTTHLHPQ
HRRLLHQRQQQSRNQHRNLNGAGDRGGHRASHQDHLRKDPYANLMLQREKDWVSKIQMMQ
LQSTDPYLDDFYYQNYFEKLEKLSAAEEIQGDGPKKERTKLITPQVAKLEHAYKPVQFEG
SLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYE
RRYLLSLEEERPALVDERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVARI
LPFLSTEQAADILMATARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQLM
NLPQSATAPAPSNPHLTAVLQNKFGLSLLLILLSRGEDLQSSGPAIESTQNNQWTEVMLM
ATRELLQIPQAALAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttagaggattgtcctctagatgaagatgaagatgcatttcaa
ggcctgggagaagaagatgaagaaattgatcaatttaatgatgatacatttgggtcaggt
gcagttgatgatgattggcaggaagcacatgagcgcctggctgagttggaagagaagcta
cctgcggcagctgatgagcaaacaggcaatagagagagggatgagatggacttgttgggt
gaccatgaggagaatctagcagaaaggctcagtaagatggtgattgaaaatgagctagaa
gatccagctatcatgagggcagtgcagaccaggccggttttacaacctcaacccagaagt
ctaaattccagcatctgggatggatctgaagttctgaggcgaatccgtggaccactactt
gctcaggaaatgcctacagtgtctgtattagaatatgccttgcctcagaggcccccacag
ggcccagaagatgatcgggacctttctgagcgagctttaccaaggcggtcaacatcacct
gtcattggaagtcctcctgttagagctgttcctataggcaccccacctaagcagatggcc
gttcccagcttcaaccagcagattctgtgtccgaagcctgttcatgtacggcccccgatg
ccaccacgttatcctgctccctatggtgagaggatgtctccaaaccagctctgcagtgtt
ccgaactcctcccttctgggccacccttttcctcctagtgttcctcctgtcctcagtccc
ctgcagagagcacagcttcttggaggagcacagctacagcctggacggatgtctcccagc
cagtttgcacgggtccctggatttgttggtagccccctggctgccatgaatcctaaattg
ctacaagggcgagttgggcagatgcttcccccagcaccaggcttccgtgccttctttagt
gttccaccccctggtacaccacctccccagcagcatcctcctggcccaggacctcacctg
caaaacctaagacctcaggccccaatgtttagaccagacacaacccaccttcatccacag
caccggcgcctgttgcatcagcggcaacagcagagtagaaatcagcatcggaatctcaat
ggtgccggagacagaggaggtcaccgggccagtcatcaagatcatctccggaaggatcca
tatgctaatctcatgctgcagcgggaaaaggattgggtctctaaaatccagatgatgcag
ctgcagagcactgatccctacctagatgatttctattaccagaattactttgaaaaactg
gagaaattgtcagctgctgaagaaatacaaggtgatggtcctaagaaggagcgaaccaag
ctcatcaccccccaggtggccaaactggaacatgcatataagcctgtgcagtttgagggc
tctttgggtaagcttactgtctctagtgtgaataatcctcgaaagatgatcgatgccgtt
gtgacatctcggagtgaggatgatgaaacaaaagaaaaacaagttcgggacaagagaaga
aaaacccttgtcataattgagaaaacctatagtttactccttgatgttgaggattatgaa
aggcgctatctcctaagtctagaagaagagcggcctgccctggtggatgaaagaaagcac
aaaatctgtagcatgtatgacaacctgaggggcaaattgcctggacaagagaggccaagc
gatgaccactttgtacagatcatgtgtatccgaaaagggaagagaatggttgcccgcatt
ctccctttcctctccacagagcaagcagctgacattctcatggcaactgccaggaacctc
cctttccttatcaagaaggacgcacaagatgaggtgctgccatgcttactgagtcccttc
tctcttctcctctatcatcttccttcagtgactgtcaccagccttctgcaacagctaatg
aacctacctcaaagtgcaactgcaccagcaccctccaaccctcacctcactgctgtgctc
cagaacaagtttggcttgtcactgctcctaatcctcctaagccgtggggaagacctacag
agttcaggccctgctatagaatcaacgcaaaataaccagtggacagaggtgatgttgatg
gcaacccgagaacttctacagatcccccaagcagccctggccaagccaatctctataccc
acaaatctagtgtcccttttttctcgctatgttgaccggcagaaactgaacttgctggag
acaaaactacagctggtccaggggatacgataa
DBGET
integrated database retrieval system
